SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene38658

Length: 1574 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene38658

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Pyruvate decarboxylase 1 n=1 Tax=Lotus corniculatus RepID=Q84V95_LOTCO	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Sma3	Putative uncharacterized protein	-	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G01330.1	PDC3 pyruvate decarboxylase-3 chr5:132538-134807 REVERSE LENGTH=592	80%
RefSeq	Arabidopsis thaliana	NP_195753.1	pyruvate decarboxylase-3 [Arabidopsis thaliana]	80%
RefSeq	Populus trichocarpa	XP_002322997.1	predicted protein [Populus trichocarpa]	80%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PRN0

Fln msg:

Fln protein: MESKPVYISISCNLAAVQHPTFSRQPVPYSLTPRLSNPKSLQAAVDMTVEFLNAAAKPVLVGGPKMRAAKAKSAFVELADASGYPVAVMPSAKGQVPETHPHFIGTYWGAISTSFCAEIVESADAYLFAGPILNDYSSVGYSLLLKKEKAIMVQPNRVTVGNGPTFGCVLMKDFLEALAKKVKHNPTCLENYRRIFVPEGVPLKSAPNEPLRVNVLFKHIQGMLTNETAVIAETGDSWFNCQKLKLPEKCGYEFQMQYGSIGWSVGATLGYAQATPEKRVIACIGDGSFQVTVQDVSTMIRNGQNPIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGIVKAIHNGEGKCWTAKVKTEEEVVEAIKTSLGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSSANSRPPNPQ*

Protein Length: 411

Fln nts: GGTCACATGCGCTCAGGTTATTGTGAATCACTTGGATGATGCCCAGGAGCTCATAGACTATGCAATTTCCACAGCGCTT_-_ATGGAGAGTAAGCCTGTGTATATCAGCATCAGCTGTAATCTTGCTGCCGTTCAACATCCCACTTTCAGCCGGCAACCTGTTCCGTATTCTCTAACACCCAGGCTAAGTAATCCTAAAAGTTTGCAAGCTGCAGTGGACATGACGGTAGAATTCCTAAATGCAGCAGCGAAGCCAGTGTTGGTAGGTGGTCCAAAGATGAGGGCTGCTAAAGCGAAAAGTGCATTTGTGGAATTAGCAGATGCATCAGGTTATCCCGTGGCTGTAATGCCTTCTGCTAAGGGGCAGGTTCCAGAGACGCATCCTCATTTCATAGGGACTTACTGGGGTGCAATAAGTACTTCATTCTGTGCTGAAATAGTTGAGTCAGCAGATGCATATTTATTTGCAGGACCGATTCTCAATGACTATAGCTCAGTGGGATATTCATTGCTATTGAAAAAGGAGAAAGCTATAATGGTTCAGCCGAACAGGGTGACTGTGGGAAATGGGCCTACTTTTGGTTGTGTGTTGATGAAAGATTTCTTAGAAGCCCTTGCAAAGAAAGTGAAGCACAACCCAACATGCTTGGAAAATTACCGGCGTATTTTTGTACCTGAAGGTGTTCCCTTGAAAAGTGCACCAAATGAGCCCTTGAGGGTCAATGTGCTATTCAAACACATTCAGGGCATGCTCACAAATGAAACTGCTGTAATTGCTGAAACTGGTGACTCTTGGTTCAATTGCCAGAAGCTTAAATTGCCAGAAAAGTGTGGGTATGAGTTTCAAATGCAGTATGGATCAATTGGCTGGTCTGTAGGAGCAACACTGGGATATGCTCAAGCTACGCCAGAAAAACGTGTAATTGCATGCATTGGTGATGGAAGCTTCCAGGTCACAGTCCAGGATGTTTCTACCATGATCCGAAATGGGCAGAATCCTATCATTTTTCTGATTAATAATGGAGGATACACTATAGAGGTCGAAATTCATGATGGACCATACAATGTCATAAAGAATTGGAACTACACCGGTATAGTAAAGGCCATTCATAACGGTGAAGGGAAATGCTGGACTGCGAAGGTTAAGACAGAAGAAGAGGTTGTAGAGGCTATTAAAACTTCCCTAGGGCCCAAAAAGGATTGCTTATGTTTCATTGAAGTCATTGTACACAAAGATGATACCAGCAAAGAGTTGCTTGAGTGGGGGTCCAGGGTTTCGTCAGCAAACAGCAGGCCACCAAATCCTCAGTAG___TGGGGCTTTGACAAGAAGAGCAATTAGAAACACTTTCCGCATCTCATGTTTGAGATGTCATTGTTTTTGTGGTCATCCTCTAGGATCATATGTTATAATGATCCTATATATCTGAATTTTGTTCAAAGGTTGAGCTGTGGCCCTCCATTTAGGCACACAGGATACTGCTACTTTTTGTGCTTGGTTAGCATGTTTAGTGTCATACTTTGCAAGAGCAGTTGGAGCCATTTTTTGCAATATGAATAAAATAGCAAGTTTTTCTGGT

Fln Alignment:

CL99Contig3___MESKPVYISISCNLAAVQHPTFSRQPVPYSLTPRLSNPKSLQAAVDMTVEFLNAAAKPVLVGGPKMRAAKAKSAFVELADASGYPVAVMPSAKGQVPETHPHFIGTYWGAISTSFCAEIVESADAYLFAGPILNDYSSVGYSLLLKKEKAIMVQPNRVTVGNGPTFGCVLMKDFLEALAKKVKHNPTCLENYRRIFVPEGVPLKSAPNEPLRVNVLFKHIQGMLTNETAVIAETGDSWFNCQKLKLPEKCGYEFQMQYGSIGWSVGATLGYAQATPEKRVIACIGDGSFQVTVQDVSTMIRNGQNPIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGIVKAIHNGEGKCWXXXXXXXXXXXXXXXXSLGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSSANSRPPNPQ
C0PRN0_______________MESKPVYISISCNLAAVQHPTFSRQPVPYSLSPRLSNPKSLEAAVDMTAEFLNAAVKPVMVGGPKMRVAKAKNAFVELADASGYPVAVMPSAKGQVPEIHPHFIGTYWGAISTSFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVIVQPNRVTIGNGPTFGCVLMKDFLEALAKKVKHNPTSLENYRRIFVPEGVPLKSAPNEPLRVNVLFKHIQGMLTNETAVIAETGDSWFNCQKLKLPEKCGYEFQMQYGSIGWSVGATLGYAQAAPDKRVIACIGDGSFQVTVQDVSTMIRNGQNTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDALHNGEGKCWTVKVKTEEEVVEAIKTSLGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANGRPPNPQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain