SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene38645

Length: 918 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene38645 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Flowering locus T-like protein (Fragment) n=4 Tax=Picea RepID=E5F6S2_PICSI	-	-	0.0	67%
FL-Next	tr=Flowering locus T-like/terminal flower1-like protein; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	68%
Sma3	Flowering locus T	-	-	7.149e-23	-

Source	Gene names
Sma3	ATC; At1g65480; At2g27550; At5g03840; At5g62040; BFT; BNTFL1-1; BNTFL1-2; BNTFL1-3; BOTFL1-1; BOTFL1-2; BRTFL1-1; BRTFL1-2; CEN; CET1; CET2; CET4; CiFT; CiFT2; CiFT3; CoTFL1-1; CoTFL1-2; CsFT; CsTFL1-1; CsTFL1-2; CsTFL1LC2; CsTFL1a; CsTFL1b; CsTFL1d; EjTF

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	vesicle	GO:0031982	Cellular Component	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	kinase activity	GO:0016301	Molecular Function	-
Sma3	protein targeting to vacuole	GO:0006623	Biological Process	-
Sma3	response to sucrose stimulus	GO:0009744	Biological Process	-
Sma3	flower development	GO:0009908	Biological Process	-
Sma3	negative regulation of flower development	GO:0009910	Biological Process	-
Sma3	positive regulation of flower development	GO:0009911	Biological Process	-
Sma3	inflorescence development	GO:0010229	Biological Process	-
Sma3	cell differentiation	GO:0030154	Biological Process	-
Sma3	regulation of timing of transition from vegetative to reproductive phase	GO:0048510	Biological Process	-
Sma3	short-day photoperiodism	GO:0048572	Biological Process	-
Sma3	photoperiodism, flowering	GO:0048573	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Phosphatidylethanolamine-binding, conserved site	IPR001858	-	0.0	-
Sma3	Phosphatidylethanolamine-binding protein PEBP	IPR008914	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G62040.1	PEBP (phosphatidylethanolamine-binding protein) family protein chr5:24922810-24923709 FORWARD LENGTH=177	58%
RefSeq	Arabidopsis thaliana	NP_201010.1	protein BROTHER of FT and TFL 1 [Arabidopsis thaliana]	58%
RefSeq	Populus trichocarpa	XP_002321903.1	predicted protein [Populus trichocarpa]	64%

Full-Lengther Next Prediction

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain