SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene37766

Length: 1188 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene37766

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO	-	-	0.0	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	43%
Sma3	FERONIA receptor-like kinase	-	-	1.162e-17	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific protein-tyrosine kinase.	EC:2.7.10.2	-	3.616e-20	-

Source	Gene names
Sma3	AT4g39110; At1g30570; At2g21480; At2g23200; At2g39360; At3g04690; At3g46290; At3g51550; At4g39110; At5g24010; At5g28680; At5g38990; At5g39000; At5g54380; At5g59700; At5g61350; B1143G03.32; F12M12.260; F18L15.10; F19H22.210; F26O13.190; F7O18.16; FER; Fen;

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	nucleic acid binding	GO:0003676	Molecular Function	-
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	protein autophosphorylation	GO:0046777	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Histone-like bacterial DNA-binding protein	IPR000119	-	-
Sma3	RNA recognition motif domain	IPR000504	-	-
Sma3	Oxidoreductase, molybdopterin-binding domain	IPR000572	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Peptidase aspartic, active site	IPR001969	-	-
Sma3	Isopenicillin N synthase, conserved site	IPR002057	-	-
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Peptidase S16, lon N-terminal	IPR003111	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	Nucleotide-binding, alpha-beta plait	IPR012677	-	-
Sma3	SKG6/AXL2 alpha-helix transmembrane domain	IPR014805	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Zinc finger, RING-type, conserved site	IPR017907	-	-
Sma3	Zinc finger, C3HC4 RING-type	IPR018957	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G54380.1	THE1 protein kinase family protein chr5:22077313-22079880 REVERSE LENGTH=855	68%
RefSeq	Arabidopsis thaliana	NP_200249.1	receptor-like protein kinase THESEUS 1 [Arabidopsis thaliana]	68%
RefSeq	Populus trichocarpa	XP_002316926.1	predicted protein [Populus trichocarpa]	68%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LKY1

Fln msg: your sequence is shorter than subject: 375 - 431

Fln protein: YLPRSKSKHNPPAWLPLPSRGNGSYVSSAPFSLGRFFTIAEIEEATNNFDENLILGVGGFGKVYNGELEDGTKVAVKRGNPTSGQGPAEFQTEIEILSKLRHRHLVSLIGYCEERCETILVYEHMANGSLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENLLTKVADFGLSKTGPTLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPAVNSALPREQVNIAEWALHCLKGGLLDQIIDPHLVGTVNDASLQKFGETAEKCLSEQGNDRPAMGDVLWNLEYALQLQETAIQNGPADKSSTSSSHPLAQTFDNGISTGSGERRSDQGSEPATFSQ*

Protein Length: 376

Fln nts: TTATCTCCCAAGATCGAAGTCAAAGCACAACCCTCCTGCCTGGTTGCCTCTGCCTTCGAGGGGGAATGGCAGCTATGTTTCCTCTGCACCTTTCAGTCTGGGCCGGTTCTTTACAATTGCAGAGATAGAAGAAGCTACCAACAACTTTGATGAAAATTTGATACTTGGTGTGGGTGGTTTTGGTAAGGTTTATAATGGTGAGCTTGAGGATGGGACCAAAGTTGCAGTTAAACGAGGCAATCCAACATCAGGGCAAGGTCCTGCAGAATTCCAAACAGAAATTGAGATTTTATCTAAACTTCGACACCGCCATCTTGTTTCTCTGATTGGATACTGCGAGGAGCGTTGTGAAACAATTCTGGTCTATGAACACATGGCCAATGGGTCTTTGAGGAGTCACTTGTATGGCACAGATCTTCCACCTCTGTCCTGGAAACAAAGGCTTGAAATATGTATAGGGGCTGCAAGAGGCCTCCACTACCTTCACACTGGAACAGCCCAGGGAATTATTCACCGTGATGTGAAGACAACAAATATTTTGCTTGACGAAAATCTTCTCACTAAGGTAGCAGATTTTGGTCTGTCAAAAACTGGACCTACACTAGACCAGACACATGTGAGCACTGCAGTGAAAGGAAGTTTTGGCTACCTTGATCCTGAGTATTTCAGGAGGCAGCAACTCACTGAGAAGTCTGATGTGTATTCATTTGGGGTAGTGCTATTGGAGGTATTGTGTGCAAGGCCTGCAGTCAATTCTGCTCTTCCGAGAGAGCAAGTCAATATTGCAGAGTGGGCACTGCATTGTCTAAAAGGAGGACTGCTTGATCAGATCATTGACCCTCATCTTGTGGGTACAGTGAATGATGCCTCTCTGCAAAAGTTTGGAGAGACAGCAGAGAAGTGTTTGTCAGAGCAAGGTAATGATAGGCCTGCTATGGGTGATGTGCTATGGAACCTGGAGTATGCCTTGCAGCTTCAGGAGACTGCCATACAAAATGGTCCAGCTGACAAGAGTTCAACTTCCTCTTCACATCCCCTAGCACAAACTTTTGATAACGGTATTTCGACAGGGTCTGGTGAAAGGCGAAGCGACCAAGGATCAGAACCTGCAACCTTCTCGCAGTGA___ATGAATCCTCGAGGAGGGTGAATGTACAGTGAATTCGTTTAAGAGTTTGTTGAATGTAGGTT

Fln Alignment:

Contig37766___FTIAEIEEATNNFDENLILGVGGFGKVYNGELED----------GTKVAVKRGNPTSGQGPAEFQTEIEILSKLRHRHLVSLIGYCEERCETILVYEHMANGSLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENLLTKVADFGLSKTGPTLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPAVNSALPREQVNIAEWAL-HCLKGGLLDQIIDPHLVGTVNDASLQKFGETAEKCLSEQGNDRPAMGDVLWNLEYALQLQETAIQ--NGPADKSSTSSSH
B8LKY1_______________FTFNELKSATRNFRPESVLGGGGFGYVFKGWIEENGTAAVKPGTGLTVAVKTLNPDGLQGHKEWLAEVNFLGQLRHANLVKLIGYCIEDNQRLLVYEYMPRGSLENHLFRKGALPLPWSTRMKIALGAAKGLEFLHGGAEKAVIYRDFKTSNILLDSEYNAKLSDFGLARDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKHRSNGEQNLVEWARPYLVDKRKLYRLVDPRLSGHYSIKGAQKVAQLAHYCLSRDPKARPTMNDVVEVLTPLLSLKDTASSSFNYQALQSQHQSQH

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain