SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene37289

Length: 3845 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v3.0_unigene37289
ATGGGGATGCATGCACAAATCACAATCGAAGGCTTCTGAGACAGCATGGAGGCTTTTGCTTAGTAGCCAGAGGAGCCTGGCCAGGAGGCAAGGTGGAGCCGATGCATCAGATAAGGTGACACGCAGGGATGCTTCTTTCAATGTTGGAAGGCATCCTCAGTTAACTTCTTGTTGAACAGTATAAAAAATTCCAGAGAAAAATGTCCACGGTGAGAGAAAACCATAGTCTTTATGGATGTATCATTCAAATGAGCTGAGTGTTCAATGGTAACTTCTACCTCGGAAATTTTATCTCGGAAACTCCCTGCAACAATTTTCCAAGGGGAAACTCCCTGCAAGATATATTAGTCAAATGAACTGAGTATTCAATGCTAACGTCTACTTCGGAGATTTTATGTCGGAAACTCCCTGCAAGTTTTTGCCAAGGGGAAACTTCCAGCAAGATATAACCATAAGGTCTTGAGATTATATCGAGTCGAGACAACAAGAAAACTAAATCGAAACATATATACAGACACCATGGAAGCCATTCAATTTGCTTCCCAACGTGCCCCATTGCTTGATTACAAAACCCTAAATTTGGGTTTAAGGAGCAGAAGAATGTGTTCCGGTCCATTTTGGATTCGAACTCGTATTTTACGCTTTCCTGCTCAGATCAGATGCCTAGCAGTAAAATCGCAAGACAACGAGGAGAGAACCCGATTTCGACAGGATCTTTTCAGGGTTTCTGAAATGGCCGTGACAATGACGATTGTTTCATTAGCATTACCGCAGGCAGCTGCATTCGCAGATGTCGCAGTGAAAAAGAGGACTAAAACTGCTAGAGAGGTCGAGGTAATGACCCCCGAGGAGCGTGCAGCGTGGACACAGGGGCTCCCGTTTGTTCAAGAACGGATTCCTTATACAGATGTTTTGAAATTGAAGTCTGAAGATAGGCTCAAGTATATTATCAAGCATCCCAAGACTCTGCCCAAGGCCAGGCCGGATGTAATTTTGCTGGTCTTGGATGATGACAGGGTAGTCAGAACCGTGCTGCCGGCGGCTGAGAGGGATAAGAAGTTCTGGGATGCATGGGATAAGCTGGGACTTGATTCGTCTATCATGGATGCTTACTCACCGCCATTGCCGAAACCCAAACCCCAACGTTCAGTACTTGAATATCTTGGGCAATTTGCCTCTGTTTTGAAAGGTAAGGATCATAAGGGCAAGAGGAAGACGCAGAATTCACAATTGCAGGAGATTCGAAGGGCTAAAATGGAATTGGAGAGGCAGCGAAAGGCGATGGAGAATGAGTTAAAGCGCCAGAAGAATATGAAAGAAAGGGCTATCAAAGAACAGACGAAGCTTGATGAAGGGCAGCAGAAGGAACAGAAGAATTTTGAAGAAAGGCGGCTCAAGGAAACCGAAAATAGGAAGAAACAACAAGAGTCGGGGACAGTGACTGTGGCTGATATCGACGCGTGGTCTGAATACTGGTATCGACTATCATCCGATGACGGTGTTCAATATGGCCTAGGATTTGTTTTCTTCTTCTTGTTTTATCAAATTGTTATTCTTGGGTTGAGGAAACGCCAAAAGGACTATGAGGATAGGTTGAAGATTGAAAAGGCTGAAGCAGAGGATAGAAAAAAAATGAAGCGGTTGGATTACGAGACGGGAGTTACAGATGATGCACTTTATTCATCTACCAAGGAAGGTCAGGGCATTGTGGGTGGAGAAAATGAAGAGAAACTTGAGGAGTCTGAGAAAAAATCAGATATTAAACTTGGGTTGCAGTTCATGCGTTCTGGTGCTCGGGTTCGTCGTGCCGAAGGTAGGCGGCCTCCTCAATATTTGAATAGGGGTGCAAATGTCAAGTTTTCGGATGTTGCTGGCTTGGGTGATATCAGGAGGGAACTTGAAGAGATTGTAGAATTTTTCAGATACGGGGAGAGGTATCGCAGGCGAGGAACACAAATTCCAACTGGCATCCTTTTGTGCGGGCAACCGGGAACTGGCAAAACATTACTGGCAAAAGCAGTAGCTTGTGAGGCAGGTGTCAACTTTTTCTCGATTTCAGCTTCCCAGTTTGTTGAGATTTATGTTGGAGTTGGTGCTTCTCGTGTACGAGCACTTTACCAAGAAGCACGAGAAAATGCACCTGCTGTTGTTTTCATTGATGAGCTGGATGCTGTTGGGCGAAAGCGTGGTCTTATTCAAGGTTCTGGAGGACAAGAACGTGATGCCACTCTCAATCAGCTCCTTACATGCTTGGATGGATTTGAAGAGAAAGGCAAAGTGATAACCATTGCTGCCACCAACAGGGCAGACATTCTGGATCCAGCTTTAGTGCGACCTGGACGGTTTGATAGGAAAATTTATATTCCTAAGCCTGGGCTTCTTGGTCGAATTGAAATTCTGAAGGTCCATGCGCGAAACAAACCTATGGCAGATGATGTTGATTACAAGTCTGTGTCCCTCATAACAGAAGGAATGGTTGGAGCTCAGCTAGCTAACTTACTTGACATTGCAGCTCTCAATATGATGCGTGATGGAAGAACTGAGATCACTACAGATGATTTACTGGAAGCTGCACGATTAGAGGAGTCTGGACTACCAGACATACGGAAACGCAGTATGGATTTGTGGCGGAAGCTGGCTCTTAATGAGGCAGCATTGGCCGTGGTTTCTGTTAACTTCCCAGATTTGAAGGATATTCAGATGATCACTATTGTCCCAAGATATGGAGAAGAGAAAGGATTTGGGCGAATTCACATGGATGCAACAAAGTTTGAGATGCCAAGCATCAGTCGACAGACAATGCTCGATCACATCACTGTGCAGCTAGCTCCACGTGCAGCAGACGAAATTTGGCATGGCCCTGATCAGTTATGTACAATTTGGGCAGAAACAGTAAACAATGCTAGGTCAGCTGCTCGAGAGCTTGTATTTGCTGGACTTTCCGATAAGGAAGAGTTTTATGGGCTATACGACTGCTGGTATGAAGTGAATCGGCTCAATGAAGTTGATGTGGAAGCAATGAGAATTCTTAACATGTGCTATGAACGTGCAAAAAAGATTTTGCAACAGAATCGGAAGCTCATGGATGCATTGATTGATGCTCTTATTGGGAAGAAGACCATCAGGAAAGCTGAGTTTTTCCGTTTGGTAGAGGAACATGGTAATCTAGATCCCATACCACCACAACTTACTGAGGTCAGAGATGCTAGTCTTGTAGAATTTCGAGAAAAGATGATGGCGGGAAAGCATGTTTCAAATTCATCTTAAAGTTCATTTGTGACAGTTTTTATGTGGGAGGAGGGAGCAGAGTAATGGAAATTCTGAGCACAATGTCCTTTTTCGTCTAAGCACAGTATTTTGGATCAAATTTTCTGGTTGAGGAGGAAATTATGATGTATAATCAGTGGTTCTGCGGGTTCTTTTGTGAACGTGGATATTTCAAAGGCCTCTTCCTATTTTCAGTCCACCTGCAGCTGGGATGTTGTTACCAATGTACCTGCAATCTTTCTTTTGTATACAGCAGCAACATACTCCTAGTCATACGTGAAGAAGCATGTATTATTTTTCAAAATCACATCTCGAACAATTTCGAGATGTGACATGTTTATACCTACTGCCATGTTTCTAAATCCAAAGGACTAAACATTAATAAAATATTTAATCTTCCATTTGGTGATTTTACTAATATTGCAAAACTGTAACTTTAGTTTTGTATGTCTGAAAATTCTTCTCCAATATTGATGTCGCAGAGATGCCTGTGACTTCAGTTATAAATCAATACAAATCAATTTGTTTCTTGTGGTTTTCAAGGAAATGGACAAGAAAATAATGCAAGAGTCGAATTG

Ace file of the UniGene sp_v3.0_unigene37289 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	PREDICTED: similar to cell division protein FtsH-like n=1 Tax=Vitis vinifera RepID=UPI0001983FB9	-	-	0.0	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	40%
Sma3	Cell division protease ftsH homolog	-	-	2.673e-11	-

Source	ECs	Term	Type	e value	Identity
Sma3	Hydrolases, Acting on peptide bonds (peptide hydrolases), Metalloendopeptidases.	EC:3.4.24.-	-	4.228e-37	-
Sma3	Microtubule-severing ATPase.	EC:3.6.4.3	-	4.041e-08	-

Source	Gene names
Sma3	AT2G30950; AT5G42270; At1g45000; At1g45000/F27F5.8; At2g30950; At3g02450; At3g02450/F16B3.8; At3g16290; At3g47060; At5g42270; At5g43010; At5g58870; CHLREDRAFT_101226; CHLREDRAFT_188404; CHLREDRAFT_24096; CHLREDRAFT_55270; CHLREDRAFT_58334; CHLREDRAFT_7278

Source	GOs	Term	Type	Identity
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	nucleolus	GO:0005730	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	endoplasmic reticulum	GO:0005783	Cellular Component	-
Sma3	Golgi apparatus	GO:0005794	Cellular Component	-
Sma3	cytosol	GO:0005829	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	chloroplast thylakoid membrane	GO:0009535	Cellular Component	-
Sma3	thylakoid	GO:0009579	Cellular Component	-
Sma3	chloroplast envelope	GO:0009941	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	thylakoid lumen	GO:0031977	Cellular Component	-
Sma3	protein complex	GO:0043234	Cellular Component	-
Sma3	ATP-dependent peptidase activity	GO:0004176	Molecular Function	-
Sma3	metalloendopeptidase activity	GO:0004222	Molecular Function	-
Sma3	serine-type endopeptidase activity	GO:0004252	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	ATPase activity	GO:0016887	Molecular Function	-
Sma3	nucleoside-triphosphatase activity	GO:0017111	Molecular Function	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	intracellular protein transport	GO:0006886	Biological Process	-
Sma3	cell cycle	GO:0007049	Biological Process	-
Sma3	multicellular organismal development	GO:0007275	Biological Process	-
Sma3	thylakoid membrane organization	GO:0010027	Biological Process	-
Sma3	photoinhibition	GO:0010205	Biological Process	-
Sma3	PSII associated light-harvesting complex II catabolic process	GO:0010304	Biological Process	-
Sma3	protein catabolic process	GO:0030163	Biological Process	-
Sma3	cell division	GO:0051301	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M41	IPR000642	-	-
Sma3	NSF attachment protein	IPR000744	-	-
Sma3		IPR001984	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ATPase, AAA-type, core	IPR003959	-	-
Sma3	ATPase, AAA-type, conserved site	IPR003960	-	-
Sma3	Peptidase, FtsH	IPR005936	-	-
Sma3	26S proteasome subunit P45	IPR005937	-	-
Sma3	Peptidase M41, FtsH extracellular	IPR011546	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	EGF-like region, conserved site	IPR013032	-	-
Sma3		IPR017909	-	-
Sma3	Peptidase S26A, signal peptidase I, serine active site	IPR019756	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G16290.1	EMB2083 AAA-type ATPase family protein chr3:5521187-5524995 REVERSE LENGTH=876	53%
RefSeq	Arabidopsis thaliana	NP_566541.1	AAA-type ATPase family protein [Arabidopsis thaliana]	53%
RefSeq	Populus trichocarpa	XP_002303302.1	predicted protein, partial [Populus trichocarpa]	54%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PQ75

Fln msg: your sequence is longer than subject: 916 - 695

Fln protein: MEAIQFASQRAPLLDYKTLNLGLRSRRMCSGPFWIRTRILRFPAQIRCLAVKSQDNEERTRFRQDLFRVSEMAVTMTIVSLALPQAAAFADVAVKKRTKTAREVEVMTPEERAAWTQGLPFVQERIPYTDVLKLKSEDRLKYIIKHPKTLPKARPDVILLVLDDDRVVRTVLPAAERDKKFWDAWDKLGLDSSIMDAYSPPLPKPKPQRSVLEYLGQFASVLKGKDHKGKRKTQNSQLQEIRRAKMELERQRKAMENELKRQKNMKERAIKEQTKLDEGQQKEQKNFEERRLKETENRKKQQESGTVTVADIDAWSEYWYRLSSDDGVQYGLGFVFFFLFYQIVILGLRKRQKDYEDRLKIEKAEAEDRKKMKRLDYETGVTDDALYSSTKEGQGIVGGENEEKLEESEKKSDIKLGLQFMRSGARVRRAEGRRPPQYLNRGANVKFSDVAGLGDIRRELEEIVEFFRYGERYRRRGTQIPTGILLCGQPGTGKTLLAKAVACEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPAVVFIDELDAVGRKRGLIQGSGGQERDATLNQLLTCLDGFEEKGKVITIAATNRADILDPALVRPGRFDRKIYIPKPGLLGRIEILKVHARNKPMADDVDYKSVSLITEGMVGAQLANLLDIAALNMMRDGRTEITTDDLLEAARLEESGLPDIRKRSMDLWRKLALNEAALAVVSVNFPDLKDIQMITIVPRYGEEKGFGRIHMDATKFEMPSISRQTMLDHITVQLAPRAADEIWHGPDQLCTIWAETVNNARSAARELVFAGLSDKEEFYGLYDCWYEVNRLNEVDVEAMRILNMCYERAKKILQQNRKLMDALIDALIGKKTIRKAEFFRLVEEHGNLDPIPPQLTEVRDASLVEFREKMMAGKHVSNSS*

Protein Length: 917

Fln nts: ATGGGGATGCATGCACAAATCACAATCGAAGGCTTCTGAGACAGCATGGAGGCTTTTGCTTAGTAGCCAGAGGAGCCTGGCCAGGAGGCAAGGTGGAGCCGATGCATCAGATAAGGTGACACGCAGGGATGCTTCTTTCAATGTTGGAAGGCATCCTCAGTTAACTTCTTGTTGAACAGTATAAAAAATTCCAGAGAAAAATGTCCACGGTGAGAGAAAACCATAGTCTTTATGGATGTATCATTCAAATGAGCTGAGTGTTCAATGGTAACTTCTACCTCGGAAATTTTATCTCGGAAACTCCCTGCAACAATTTTCCAAGGGGAAACTCCCTGCAAGATATATTAGTCAAATGAACTGAGTATTCAATGCTAACGTCTACTTCGGAGATTTTATGTCGGAAACTCCCTGCAAGTTTTTGCCAAGGGGAAACTTCCAGCAAGATATAACCATAAGGTCTTGAGATTATATCGAGTCGAGACAACAAGAAAACTAAATCGAAACATATATACAGACACC_-_ATGGAAGCCATTCAATTTGCTTCCCAACGTGCCCCATTGCTTGATTACAAAACCCTAAATTTGGGTTTAAGGAGCAGAAGAATGTGTTCCGGTCCATTTTGGATTCGAACTCGTATTTTACGCTTTCCTGCTCAGATCAGATGCCTAGCAGTAAAATCGCAAGACAACGAGGAGAGAACCCGATTTCGACAGGATCTTTTCAGGGTTTCTGAAATGGCCGTGACAATGACGATTGTTTCATTAGCATTACCGCAGGCAGCTGCATTCGCAGATGTCGCAGTGAAAAAGAGGACTAAAACTGCTAGAGAGGTCGAGGTAATGACCCCCGAGGAGCGTGCAGCGTGGACACAGGGGCTCCCGTTTGTTCAAGAACGGATTCCTTATACAGATGTTTTGAAATTGAAGTCTGAAGATAGGCTCAAGTATATTATCAAGCATCCCAAGACTCTGCCCAAGGCCAGGCCGGATGTAATTTTGCTGGTCTTGGATGATGACAGGGTAGTCAGAACCGTGCTGCCGGCGGCTGAGAGGGATAAGAAGTTCTGGGATGCATGGGATAAGCTGGGACTTGATTCGTCTATCATGGATGCTTACTCACCGCCATTGCCGAAACCCAAACCCCAACGTTCAGTACTTGAATATCTTGGGCAATTTGCCTCTGTTTTGAAAGGTAAGGATCATAAGGGCAAGAGGAAGACGCAGAATTCACAATTGCAGGAGATTCGAAGGGCTAAAATGGAATTGGAGAGGCAGCGAAAGGCGATGGAGAATGAGTTAAAGCGCCAGAAGAATATGAAAGAAAGGGCTATCAAAGAACAGACGAAGCTTGATGAAGGGCAGCAGAAGGAACAGAAGAATTTTGAAGAAAGGCGGCTCAAGGAAACCGAAAATAGGAAGAAACAACAAGAGTCGGGGACAGTGACTGTGGCTGATATCGACGCGTGGTCTGAATACTGGTATCGACTATCATCCGATGACGGTGTTCAATATGGCCTAGGATTTGTTTTCTTCTTCTTGTTTTATCAAATTGTTATTCTTGGGTTGAGGAAACGCCAAAAGGACTATGAGGATAGGTTGAAGATTGAAAAGGCTGAAGCAGAGGATAGAAAAAAAATGAAGCGGTTGGATTACGAGACGGGAGTTACAGATGATGCACTTTATTCATCTACCAAGGAAGGTCAGGGCATTGTGGGTGGAGAAAATGAAGAGAAACTTGAGGAGTCTGAGAAAAAATCAGATATTAAACTTGGGTTGCAGTTCATGCGTTCTGGTGCTCGGGTTCGTCGTGCCGAAGGTAGGCGGCCTCCTCAATATTTGAATAGGGGTGCAAATGTCAAGTTTTCGGATGTTGCTGGCTTGGGTGATATCAGGAGGGAACTTGAAGAGATTGTAGAATTTTTCAGATACGGGGAGAGGTATCGCAGGCGAGGAACACAAATTCCAACTGGCATCCTTTTGTGCGGGCAACCGGGAACTGGCAAAACATTACTGGCAAAAGCAGTAGCTTGTGAGGCAGGTGTCAACTTTTTCTCGATTTCAGCTTCCCAGTTTGTTGAGATTTATGTTGGAGTTGGTGCTTCTCGTGTACGAGCACTTTACCAAGAAGCACGAGAAAATGCACCTGCTGTTGTTTTCATTGATGAGCTGGATGCTGTTGGGCGAAAGCGTGGTCTTATTCAAGGTTCTGGAGGACAAGAACGTGATGCCACTCTCAATCAGCTCCTTACATGCTTGGATGGATTTGAAGAGAAAGGCAAAGTGATAACCATTGCTGCCACCAACAGGGCAGACATTCTGGATCCAGCTTTAGTGCGACCTGGACGGTTTGATAGGAAAATTTATATTCCTAAGCCTGGGCTTCTTGGTCGAATTGAAATTCTGAAGGTCCATGCGCGAAACAAACCTATGGCAGATGATGTTGATTACAAGTCTGTGTCCCTCATAACAGAAGGAATGGTTGGAGCTCAGCTAGCTAACTTACTTGACATTGCAGCTCTCAATATGATGCGTGATGGAAGAACTGAGATCACTACAGATGATTTACTGGAAGCTGCACGATTAGAGGAGTCTGGACTACCAGACATACGGAAACGCAGTATGGATTTGTGGCGGAAGCTGGCTCTTAATGAGGCAGCATTGGCCGTGGTTTCTGTTAACTTCCCAGATTTGAAGGATATTCAGATGATCACTATTGTCCCAAGATATGGAGAAGAGAAAGGATTTGGGCGAATTCACATGGATGCAACAAAGTTTGAGATGCCAAGCATCAGTCGACAGACAATGCTCGATCACATCACTGTGCAGCTAGCTCCACGTGCAGCAGACGAAATTTGGCATGGCCCTGATCAGTTATGTACAATTTGGGCAGAAACAGTAAACAATGCTAGGTCAGCTGCTCGAGAGCTTGTATTTGCTGGACTTTCCGATAAGGAAGAGTTTTATGGGCTATACGACTGCTGGTATGAAGTGAATCGGCTCAATGAAGTTGATGTGGAAGCAATGAGAATTCTTAACATGTGCTATGAACGTGCAAAAAAGATTTTGCAACAGAATCGGAAGCTCATGGATGCATTGATTGATGCTCTTATTGGGAAGAAGACCATCAGGAAAGCTGAGTTTTTCCGTTTGGTAGAGGAACATGGTAATCTAGATCCCATACCACCACAACTTACTGAGGTCAGAGATGCTAGTCTTGTAGAATTTCGAGAAAAGATGATGGCGGGAAAGCATGTTTCAAATTCATCTTAA___AGTTCATTTGTGACAGTTTTTATGTGGGAGGAGGGAGCAGAGTAATGGAAATTCTGAGCACAATGTCCTTTTTCGTCTAAGCACAGTATTTTGGATCAAATTTTCTGGTTGAGGAGGAAATTATGATGTATAATCAGTGGTTCTGCGGGTTCTTTTGTGAACGTGGATATTTCAAAGGCCTCTTCCTATTTTCAGTCCACCTGCAGCTGGGATGTTGTTACCAATGTACCTGCAATCTTTCTTTTGTATACAGCAGCAACATACTCCTAGTCATACGTGAAGAAGCATGTATTATTTTTCAAAATCACATCTCGAACAATTTCGAGATGTGACATGTTTATACCTACTGCCATGTTTCTAAATCCAAAGGACTAAACATTAATAAAATATTTAATCTTCCATTTGGTGATTTTACTAATATTGCAAAACTGTAACTTTAGTTTTGTATGTCTGAAAATTCTTCTCCAATATTGATGTCGCAGAGATGCCTGTGACTTCAGTTATAAATCAATACAAATCAATTTGTTTCTTGTGGTTTTCAAGGAAATGGACAAGAAAATAATGCAAGAGTCGAATTG

Fln Alignment:

Contig37289___VKFSDVAGLGDIRRELEEIVXXXXXXXXXXXXGTQIPTGILLCGQPGTGKTLLAKAVACEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPAVVFIDELDAVGRKRGLIQGSGGQERDATLNQLLTCLDGFEEKGKVITIAATNRADILDPALVRPGRFDRKIYIPKPGLLGRIEILKVHARNKPMADDVDYKSVSLITEGMVGAQLANLLDIAALNMMRDGRTEITT---DDLLE--AARLEESGLPDIRKRSMDLWRKLALNEAALAVVSVNFPDLKDIQMITIVPRYGEEKGFGRIHMDATKFEMPSISRQTMLDHITVQLAPRAADEIWHGPDQLCTIWAETVNNARSAARELVFA---------GLSDKEEFYGLYDCWYEVNRLNE-----VDVEAMRILNMCYERAKKILQQNRKLMDALIDALIGKKTIRKAEFFRLVEE
C0PQ75_______________VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGIGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDAALLRPGRFDRQVSVDVPDVKGRTEILKVHGGNKKFDSDVSLGVIAMRTPGFSGADLANLLNEAAILAGRRGRSAISAKEIDDSIDRIVAGMEGTIMTDGKNKSL-----VAYHEVGHAICGTLTPGHDAVQKVTLIPR-GQARG---LTWFIPGDDPTLISRQQLFARIVGGLGGRAAEQVIFGESEVTTGAASDLQMVTSMAKQMVTVFGMSEIGPWSLMDAAQSGDVIMRMMARNSMSEKLAEDIDEAVKSLSDQAYEVALGHIRNNRAAIDKIVEVLLEKETMTGDEFRALLSE

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
1139	33		66		0.997452
1491		20		80	0.995493
1492	20			80	0.995493
1497		50		50	1.0
1500		50		50	1.0
1549	36		63		1.0
1640		85		14	0.993533
2870	33		66		0.997452
2920	25	75			0.996473
2949			80	20	0.995493
2951	80			20	0.995493
3008	16	83			0.994512
3046		16		83	0.994512
3047		85		14	0.993533
3056	85		14		0.993533
3170		50	50		1.0
3309	75	25			0.996473
3365	25		75		0.996473
3385	25			75	0.996473
3471	50		50		1.0
3496	50	50			1.0
3542	50		50		1.0
3623	50	50			1.0
3767	16			83	0.994512
3769	16		83		0.994512
3774		16	83		0.994512
3779		20		80	0.995493
3781		20		80	0.995493
3782	20		80		0.995493
3783			80	20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain