SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene37044

Length: 773 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene37044 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana] gb\|AAY34172.1\| At1g13140 [Arabidopsis thaliana] gb\|AEE28974.1\| cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana]	-	-	1.99965e-42	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%
Sma3	Cytochrome P450	-	-	4.447e-21	-

Source	ECs	Term	Type	e value	Identity
Sma3		EC:1.14.-.-	-	6.419e-06	-
Sma3	Unspecific monooxygenase.	EC:1.14.14.1	-	2.147e-19	-

Source	KEGGs	Term	e value	Identity
Sma3	Fatty acid metabolism	00071	2.147e-19	%
Sma3	Steroid hormone biosynthesis	00140	2.147e-19	%
Sma3	Caffeine metabolism	00232	2.147e-19	%
Sma3	Tryptophan metabolism	00380	2.147e-19	%
Sma3	Arachidonic acid metabolism	00590	2.147e-19	%
Sma3	Linoleic acid metabolism	00591	2.147e-19	%
Sma3	Aminobenzoate degradation	00627	2.147e-19	%
Sma3	Retinol metabolism	00830	2.147e-19	%
Sma3	Metabolism of xenobiotics by cytochrome P450	00980	2.147e-19	%
Sma3	Drug metabolism - cytochrome P450	00982	2.147e-19	%
Sma3	Drug metabolism - other enzymes	00983	2.147e-19	%
Sma3	Biosynthesis of alkaloids derived from shikimate pathway	01063	2.147e-19	%
Sma3	Metabolic pathways	01100	2.147e-19	%

Source	Gene names
Sma3	A_IG005I10.21; At1g01600; At1g01600/F22L4_10; At1g13150; At1g24540; At1g34540; At1g63710; At2g27690; At2g27690/F15K20.21; At2g45970; At3g26125; At3g56630; At4g00360; At5g08250; At5g23190; At5g58860; B0103C08-B0602B01.11; B1096A10.16; CYP86; CYP86A1; CYP86

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	endoplasmic reticulum membrane	GO:0005789	Cellular Component	-
Sma3	microsome	GO:0005792	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3		GO:0008393	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	fatty acid metabolic process	GO:0006631	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	suberin biosynthetic process	GO:0010345	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	RNA helicase, ATP-dependent, DEAD-box, conserved site	IPR000629	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Phosphoglycerate/bisphosphoglycerate mutase, active site	IPR001345	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Cytochrome P450, B-class	IPR002397	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	EGF-like region, conserved site	IPR013032	-	-
Sma3	Histidine phosphatase superfamily, clade-1	IPR013078	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G13140.1	CYP86C3 cytochrome P450, family 86, subfamily C, polypeptide 3 chr1:4478667-4480271 REVERSE LENGTH=534	51%
RefSeq	Arabidopsis thaliana	NP_001184979.1	cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana]	51%
RefSeq	Populus trichocarpa	XP_002314581.1	cytochrome P450 [Populus trichocarpa]	54%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain