SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene37036

Length: 793 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene37036

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj\|BAG94677.1\| unnamed protein product [Oryza sativa Japonica Group]	-	-	0.0	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%
Sma3	Wall-associated kinase, putative	-	-	8.529e-20	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific protein-tyrosine kinase.	EC:2.7.10.2	-	8.277e-11	-

Source	Gene names
Sma3	AT5G48740; AT5G49770; At1g18390; At1g20650; At1g25390; At1g29730; At1g66880; At1g70520; At1g70530; At2g23450; At5g38210; B1148D12.10; B1153E06.9; B1250G12.30; B1642C07.38; BISERK1; CRK2; CRK3; F14G9.24; F15H18.11; F15H18.25; F1N18.20; F24J13.10; F24J13.9;

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	nucleic acid binding	GO:0003676	Molecular Function	-
Sma3	peptidyl-prolyl cis-trans isomerase activity	GO:0003755	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein folding	GO:0006457	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	EGF-type aspartate/asparagine hydroxylation site	IPR000152	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Epidermal growth factor-like domain	IPR000742	-	-
Sma3	Blue (type 1) copper domain	IPR000923	-	-
Sma3	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	IPR001179	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	EGF-like calcium-binding	IPR001881	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Peptidoglycan-binding Lysin subgroup	IPR002482	-	-
Sma3	Gnk2-homologous domain	IPR002902	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Argonaute/Dicer protein, PAZ	IPR003100	-	-
Sma3	Stem cell self-renewal protein Piwi	IPR003165	-	-
Sma3	Endonuclease/exonuclease/phosphatase	IPR005135	-	-
Sma3	EGF-like domain	IPR006209	-	-
Sma3	Epidermal growth factor-like	IPR006210	-	-
Sma3	Tyrosine-protein kinase, active site	IPR008266	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	EGF-like region, conserved site	IPR013032	-	-
Sma3		IPR013091	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	-
Sma3	Domain of unknown function DUF1785	IPR014811	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EGF-like calcium-binding, conserved site	IPR018097	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-
Sma3	Ribosomal protein S14, conserved site	IPR018271	-	-
Sma3	Peptidoglycan-binding lysin domain	IPR018392	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G18390.2	-	51%
RefSeq	Arabidopsis thaliana	NP_001154349.1	protein kinase domain-containing protein [Arabidopsis thaliana]	51%
RefSeq	Populus trichocarpa	XP_002314842.1	predicted protein, partial [Populus trichocarpa]	64%

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	G %	T %	Probability
181	33	66	0.997452
182	33	66	0.997452
183	33	66	0.997452

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain