SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene36597

Length: 872 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene36597 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	MazG domain containing protein	-	-	2.0e-07	30%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Sma3	Xtp3a-related NTP pyrophosphatase	-	-	3.622e-09	-

Source	Gene names
Sma3	At3g25400; GSVIVT00012955001; GSVIVT00016278001; GSVIVT00020296001; GSVIVT00033515001; MICPUCDRAFT_70691; MICPUN_113203; OSIGBa0111I14.3; OSIGBa0140J09.11; OSJNBb0070J16.14; OSJNBb0072M01.10; Os02g0479300; Os04g0346800; Os04g0515400; OsI_07212; OsI_15429;

Source	InterPros	Term	Type	Identity
Sma3	NTP pyrophosphohydrolase MazG, putative catalytic core	IPR004518	-	-
Sma3	EAR	IPR009039	-	-
Sma3	NTP Pyrophosphohydrolase MazG-related, RS21-C6	IPR011394	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G25400.1	" CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species	4.0e-38	65%
RefSeq	Arabidopsis thaliana	NP_189167.2	uncharacterized protein [Arabidopsis thaliana]	6.0e-38	65%
RefSeq	Populus trichocarpa	XP_002321100.1	predicted protein [Populus trichocarpa]	0.0	75%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
94	75		25		0.996473
284	75			25	0.996473
285	25			75	0.996473
833		62		36	1.0
851	14		57		1.0
854	20			80	0.995493
862			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain