SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene36341

Length: 1056 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene36341 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI	-	-	8.0e-30	88%
FL-Next	sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Sma3	40S ribosomal protein S21	-	-	6.254e-11	-

Source	Gene names
Sma3	At3g53890; At5g27700; CHLREDRAFT_129742; F5K20_190; GSVIVT00019777001; GSVIVT00029813001; LOC_Os03g22460; LOC_Os03g46490; MICPUCDRAFT_45937; MICPUN_109558; MtrDRAFT_AC148817g44v2; OSJNBa0039O18.25; OSJNBb0036M02.11; OSTLU_27816; Os03g0345200; Os03g0667800

Source	GOs	Term	Type	Identity
Sma3	ribosome	GO:0005840	Cellular Component	-
Sma3	cytosolic small ribosomal subunit	GO:0022627	Cellular Component	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein S21e	IPR001931	-	0.0	-
Sma3	Ribosomal protein S21e, conserved site	IPR018279	-	0.0	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT5G27700.1	Ribosomal protein S21e chr5:9807541-9808048 REVERSE LENGTH=82	5.0e-34	80%
RefSeq	Arabidopsis thaliana	NP_198122.4	small subunit ribosomal protein S21e [Arabidopsis thaliana]	6.0e-34	80%
RefSeq	Populus trichocarpa	XP_002318991.1	predicted protein [Populus trichocarpa]	2.0e-34	81%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain