SustainPineDB

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Assembly info
Unigenes
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SSRs
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ECs
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene35831

Length: 409 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene35831 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ribosomal protein S26e n=1 Tax=Sphaerius sp. APV-2005 RepID=Q4LAZ6_9COLE	-	-	8.40779e-45	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	64%
Sma3	40S ribosomal protein S26	-	-	2.565e-22	-

Source	Gene names
Sma3	At2g40510; At2g40590; At3g56340; CHLREDRAFT_46276; F18O21_300; GSVIVT00023949001; GSVIVT00029423001; MICPUCDRAFT_27736; MICPUN_61082; OSJNBa0018K15.3; OSTLU_14364; Os01g0823300; Os05g0477300; OsI_04251; OsI_20339; OsJ_03907; OsJ_18924; Ot02g05170; PHATRDR

Source	GOs	Term	Type	Identity
Sma3	ribosome	GO:0005840	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	cytosolic small ribosomal subunit	GO:0022627	Cellular Component	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein S26e	IPR000892	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G56340.1	Ribosomal protein S26e family protein chr3:20892309-20893343 REVERSE LENGTH=130	66%
RefSeq	Arabidopsis thaliana	NP_191193.1	40S ribosomal protein S26-3 [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002319327.1	predicted protein [Populus trichocarpa]	69%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain