SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene35078

Length: 601 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene35078 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Helianthus annuus RepID=A1Z3W6_HELAN	-	-	0.0	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Sma3	Beta-ketoacyl-ACP synthase II	-	-	9.207e-17	-

Source	ECs	Term	Type	e value	Identity
Sma3	Beta-ketoacyl-acyl-carrier-protein synthase I.	EC:2.3.1.41	-	9.993e-30	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Fatty acid biosynthesis	00061		9.993e-30	%
Sma3	Metabolic pathways	01100		9.993e-30	%

Source	Gene names
Sma3	AT1G74960; At1g74960; At2g04540; At5g46290; B1056G08.109; CHLREDRAFT_114457; CHLREDRAFT_139619; CHLREDRAFT_205887; CwKASII1; CwKASII2; F25A4.7; FABFa; FABFb; GSVIVT00003432001; GSVIVT00006723001; GSVIVT00016391001; GSVIVT00025980001; GSVIVT00034037001; KA

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	chloroplast stroma	GO:0009570	Cellular Component	-
Sma3	chloroplast envelope	GO:0009941	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	3-oxoacyl-[acyl-carrier-protein] synthase activity	GO:0004315	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	transferase activity, transferring acyl groups other than amino-acyl groups	GO:0016747	Molecular Function	-
Sma3	fatty acid biosynthetic process	GO:0006633	Biological Process	-
Sma3	unsaturated fatty acid biosynthetic process	GO:0006636	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	biosynthetic process	GO:0009058	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	BTB/POZ-like	IPR000210	-	-
Sma3	Beta-ketoacyl synthase	IPR000794	-	-
Sma3	Thiolase	IPR002155	-	-
Sma3	BTB/POZ fold	IPR011333	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	BTB/POZ	IPR013069	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Beta-ketoacyl synthase, N-terminal	IPR014030	-	-
Sma3	Beta-ketoacyl synthase, C-terminal	IPR014031	-	-
Sma3	Thiolase-like, subgroup	IPR016038	-	-
Sma3	3-oxoacyl-[acyl-carrier-protein] synthase 2	IPR017568	-	-
Sma3	Beta-ketoacyl synthase, active site	IPR018201	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G46290.3	KASI 3-ketoacyl-acyl carrier protein synthase I chr5:18774439-18776629 REVERSE LENGTH=489	78%
RefSeq	Arabidopsis thaliana	NP_199441.1	3-oxoacyl-[acyl-carrier-protein] synthase I [Arabidopsis thaliana]	78%
RefSeq	Populus trichocarpa	XP_002305334.1	predicted protein [Populus trichocarpa]	77%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain