SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene34969

Length: 894 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene34969

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	2-deoxyglucose-6-phosphate phosphatase, putative n=1 Tax=Ricinus communis RepID=B9S4C2_RICCO	-	-	0.0	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%

Source	Gene names
Sma3	F9F8.21; GSVIVT00029407001; OSJNBa0086E02.13; Os05g0168300; OsI_18609; OsJ_17267; PHYPADRAFT_119315; POPTRDRAFT_1107808; RCOM_0689400;

Source	GOs	Term	Type	e value	Identity
Sma3	catalytic activity	GO:0003824	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Haloacid dehalogenase-like hydrolase	IPR005834	-	0.0	-
Sma3	HAD-superfamily hydrolase, subfamily IA, variant 3	IPR006402	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G10970.1	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein chr3:3433276-3436077 REVERSE LENGTH=365	65%
RefSeq	Arabidopsis thaliana	NP_566385.1	haloacid dehalogenase-like hydrolase [Arabidopsis thaliana]	65%
RefSeq	Populus trichocarpa	XP_002325812.1	predicted protein [Populus trichocarpa]	62%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVF8

Fln msg: Warning!, your query overlaps and the subject is separated, your sequence is shorter than subject: 274 - 360

Fln protein: DSNGTFPTSKNLFMQEAIGAEHGEAFEAYRPNGPLKVDVDFLNDRMRESGLQRIRYAMKPDEAFGLIFSWDNVVADTRTLRIYAWNQLASEEGKTIPKDGETQRLMLSAGAEYVLCKILCWGEAGNEAERLKMRLSEIFYEELLKLQAPMEGLKEWLEALYTAGVPCAVASSLDRYNLLAALQRMGLRKYFQAIVSDEDGMExxxxxMAVALIGSHPAYELVQADLAVANFSELSVINLRRLFANKGCEFMDLQKQNVEESPTKKKLIIDTLF*

Protein Length: 275

Fln nts: CGATTCCAATGGCACCTTCCCAACATCAAAAAATCTCTTCATGCAAGAGGCTATTGGAGCTGAGCATGGAGAGGCTTTTGAAGCTTATAGACCAAATGGACCATTAAAAGTTGATGTGGATTTCCTAAATGACCGAATGCGTGAAAGTGGCCTTCAAAGAATACGATATGCTATGAAACCTGATGAAGCATTTGGTCTTATTTTTTCCTGGGACAATGTTGTGGCAGATACTCGGACTCTCAGGATATATGCTTGGAATCAACTTGCTTCTGAAGAAGGTAAAACCATTCCGAAAGATGGTGAGACGCAACGTTTGATGCTTTCTGCTGGTGCTGAGTATGTCTTATGTAAGATTCTTTGCTGGGGAGAAGCTGGAAATGAAGCCGAGAGGCTGAAAATGCGTCTGTCAGAAATTTTCTACGAGGAATTATTAAAATTACAAGCACCCATGGAGGGATTAAAGGAGTGGCTGGAAGCACTTTATACGGCTGGTGTGCCATGTGCAGTTGCATCATCCTTAGATCGCTACAATCTACTTGCAGCTCTTCAAAGAATGGGACTTCGAAAATATTTTCAGGCTATAGTGTCAGACGAAGATGGAATGGAGxxxxxxxxxxxxxxxATGGCAGTTGCTTTGATTGGTTCTCATCCTGCATATGAACTAGTGCAGGCCGATCTTGCTGTAGCCAACTTTAGCGAACTTTCTGTCATCAACTTGCGGAGATTATTTGCAAATAAAGGTTGTGAATTCATGGATTTACAAAAGCAAAATGTTGAGGAAAGCCCAACCAAGAAAAAGCTCATCATTGACACACTTTTTTAGGATATCAAGGACTTGATGCGACATGGAAGTCGGCTTCACTGAAAATTTTAGAGACTGTGCATGCCATTTTGC

Fln Alignment:

Contig34969___DSNGTFPTSKNLFMQEAIGAEHGEAFEAYRPNGPLKVDVDFLNDRMRESGLQRIRYAMKPDEAFGLIFSWDNVVADTRTLRIYAWNQLASEEGKTIPKDGETQRLMLSAGAEYVLCKILCWGEAGNEAERLKMRLSEIFYEELLKLQAPMEGLKEWLEALYTAGVPCAVASSLDRYNLLAALQRMGLRKYFQAIVSDEDGMESIAQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNCTMMAVALIGSHPAYELVQADLAVANFSELSVINLRRLFANKGCEFMDLQKQNVEESPTKKKLIIDTLF
A9NVF8_______________DSNGAYPTSKNLFMQEAIGAEHGEAFEAYRPNGPLKVDVDFLNDRMRESGLQRIRYAMKPDEAFGLIFSWDNVVADTRTLRIDAWNQLASEEGKTIPKDGETQRWMLSAGAEYVLCKILCWGEAGNEVERLKMRLSEIFYEELLKLQAPMDGLKEWLEALYTAGVPCAVASSLDRQNLLAALQRMGLRKYFQAIVSDEDGMESIAQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNCTMMAVALIGSHPAYELVQADLAVASFNELSVINLRRLFANKGCEFMDLQKQNVEESPSKKKLIIDTLF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain