SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene33574

Length: 1026 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene33574

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Intracellular pathogenesis-related protein PinmIII n=15 Tax=Pinus monticola RepID=O81134_PINMO	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	e value	Identity
Sma3	defense response	GO:0006952	Biological Process	0.0	-
Sma3	response to biotic stimulus	GO:0009607	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Bet v I domain	IPR000916	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
388	42		57		1.0
462	62	37			1.0
472	37		62		1.0
624	25			75	0.996473
844		82		17	1.0
933		34	66		1.0
944		3	96		0.99989
949		1	3	95	0.999393
952		61		38	1.0
954			96	3	0.999911
955	35			64	1.0
976	56	43			1.0
980			3	95	0.918242
981	6	91			1.0
983	9	15	9	65	1.0
985	87		12		0.992554
986	66	16		16	0.988813
988			80	20	0.995493
997	25			75	0.996473
998		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain