SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene32940

Length: 925 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene32940

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	N-acetyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RTP4_RICCO	-	-	0.0	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%
Sma3	Putative alanine acetyl transferase	-	-	1.934e-08	-

Source	Gene names
Sma3	At2g32020; At2g32030; At3g22560; GSVIVT00020016001; GSVIVT00020017001; GSVIVT00020018001; LOC_Os03g58010; LOC_Os03g58020; OSJNBb0060J21.4; OSJNBb0060J21.5; Os03g0794200; Os03g0794300; OsI_13871; OsI_13872; OsJ_12930; PHYPADRAFT_158674; POPTRDRAFT_593410;

Source	GOs	Term	Type	Identity
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	N-acetyltransferase activity	GO:0008080	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	GNAT domain	IPR000182	-	-
Sma3	DNA ligase, ATP-dependent, conserved site	IPR016059	-	-
Sma3	Acyl-CoA N-acyltransferase	IPR016181	-	-
Sma3	Peptidase S1/S6, chymotrypsin/Hap, active site	IPR018114	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G32020.1	Acyl-CoA N-acyltransferases (NAT) superfamily protein chr2:13631193-13631744 REVERSE LENGTH=183	45%
RefSeq	Arabidopsis thaliana	NP_180762.1	GCN5-related N-acetyltransferase-like protein [Arabidopsis thaliana]	45%
RefSeq	Populus trichocarpa	XP_002332679.1	predicted protein [Populus trichocarpa]	50%

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
189	42		57		1.0
205		57		42	1.0
211	57		42		1.0
216			42	57	1.0
275	57		42		1.0
294		42		57	1.0
304	57	42			1.0
331	40	60			1.0
333	40	60			1.0
338			60	40	1.0
347		60		40	1.0
393			75	25	0.996473
414		50	50		1.0
417	25		75		0.996473
756			17	82	1.0
757	11		88		0.999952
764	82		17		1.0
771		76	23		1.0
781	70		29		1.0
784		70		29	1.0
804	68		31		1.0
810	31		68		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain