SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene32365

Length: 805 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene32365

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	GCN5-related N-acetyltransferase-like protein [Arabidopsis thaliana] gb\|AAK17146.1\|AF325078_1 putative alanine acetyl transferase [Arabidopsis thaliana] gb\|AAD15401.1\| putative alanine acetyl transferase [Arabidopsis thaliana] gb\|ABD60717.1\| At2g32030 [Ar	-	-	2.0e-33	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%

Source	Gene names
Sma3	GSVIVT00020016001; GSVIVT00020017001; GSVIVT00020018001; RCOM_0911790;

Source	GOs	Term	Type	e value	Identity
Sma3	N-acetyltransferase activity	GO:0008080	Molecular Function	0.0	-
Sma3	metabolic process	GO:0008152	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	GNAT domain	IPR000182	-	-
Sma3	Acyl-CoA N-acyltransferase	IPR016181	-	-
Sma3	Peptidase S1/S6, chymotrypsin/Hap, active site	IPR018114	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G32030.1	Acyl-CoA N-acyltransferases (NAT) superfamily protein chr2:13632675-13633241 REVERSE LENGTH=188	1.0e-35	46%
RefSeq	Arabidopsis thaliana	NP_180763.1	GCN5-related N-acetyltransferase-like protein [Arabidopsis thaliana]	2.0e-35	46%

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
421		33	66		0.997452
430	66		33		0.997452
508	75		25		0.996473
547			87	12	0.992554
569	87	12			0.992554
583	12	87			0.992554
711	90		10		0.90298
751	11			88	0.923564
756			88	11	0.923564
760	11		88		0.923564
761		12		87	0.992554
763	12			87	0.992554
767			16	83	0.994512
768	83			16	0.994512
769	83			16	0.994512
771		16		83	0.994512
775	16			83	0.994512
777		83		16	0.994512
779	83		16		0.994512
780	83			16	0.994512
782		83		16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain