SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene32163

Length: 477 nt

UniGene Fasta

>sp_v3.0_unigene32163
CAGCTTCGATTCAGCCGTTCATGGCTGTGACTTCGTGGTTCACATGGCCACTCCCACGGATTACACCAAAGATCCAGAGACTGGTGTTATCCAAGCCGCGGTGAATGGGACTCTGGATATTCTGAGCGCTTGCACAAAGGCAAAATCCGTTAAGCGTGTAATTTACACCTCGTCCATAACCGCAGCATCTCCGCTGAAAGATAAGGGCGAATACATGGACTTCGTTGATGAATCTTGCTGGACCAATGTCGATCTCATCAGGCGTGAAAAACCGCCTTTCTGGATGTATTATGTAGCCAAGACATTAACAGAGCAAGCAGCGCTTCAGTATGGATCAGATCATGGGATTGATGTGGTGACAATAGTGCCATCCCTCGTTGCTGGACCTTCTCTTACACCAACAATTCCGCTGAGCATTGCACAGACTTTAACCCCTATAACAGGCAATGAACAATTCTGTGGATATATAAAGGAGCT

Ace file of the UniGene sp_v3.0_unigene32163

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Anthocyanidin reductase n=1 Tax=Ginkgo biloba RepID=Q5XLY0_GINBI	-	-	3.0e-40	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%
Sma3	Dihydroflavonol 4-reductase	-	-	0.0	-

Source	ECs	Term	Type	e value	Identity
Sma3	Dihydrokaempferol 4-reductase.	EC:1.1.1.219	-	1.87e-15	-

Source	KEGGs	Term	e value	Identity
Sma3	Flavonoid biosynthesis	00941	1.87e-15	%
Sma3	Biosynthesis of phenylpropanoids	01061	1.87e-15	%
Sma3	Metabolic pathways	01100	1.87e-15	%
Sma3	Biosynthesis of secondary metabolites	01110	1.87e-15	%

Source	Gene names
Sma3	ANR; ANR/BAN1; ANR/BAN2; CtDFR; DFR; DFR-A; DFR-B; DFR-C; DFR1; DFR2; DFR3; DFR4; DFR5; Dfr1; FrDFR; GSVIVT00005344001; GSVIVT00026339001; GSVIVT00026341001; IhDFR; LAR; LsDFR; MtrDRAFT_AC155890g32v2; MtrDRAFT_AC155890g8v2; POPTRDRAFT_206006; POPTRDRAFT_8

Source	GOs	Term	Type	Identity
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	dihydrokaempferol 4-reductase activity	GO:0045552	Molecular Function	-
Sma3	coenzyme binding	GO:0050662	Molecular Function	-
Sma3	cellular metabolic process	GO:0044237	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	NAD-dependent epimerase/dehydratase	IPR001509	-	0.0	-
Sma3	NAD(P)-binding domain	IPR016040	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ADN9

Fln msg: Distance to subject end: 106 aas, your sequence is shorter than subject: 158 - 343

Fln protein: SFDSAVHGCDFVVHMATPTDYTKDPETGVIQAAVNGTLDILSACTKAKSVKRVIYTSSITAASPLKDKGEYMDFVDESCWTNVDLIRREKPPFWMYYVAKTLTEQAALQYGSDHGIDVVTIVPSLVAGPSLTPTIPLSIAQTLTPITGNEQFCGYIKE

Protein Length: 159

Fln nts: CAGCTTCGATTCAGCCGTTCATGGCTGTGACTTCGTGGTTCACATGGCCACTCCCACGGATTACACCAAAGATCCAGAGACTGGTGTTATCCAAGCCGCGGTGAATGGGACTCTGGATATTCTGAGCGCTTGCACAAAGGCAAAATCCGTTAAGCGTGTAATTTACACCTCGTCCATAACCGCAGCATCTCCGCTGAAAGATAAGGGCGAATACATGGACTTCGTTGATGAATCTTGCTGGACCAATGTCGATCTCATCAGGCGTGAAAAACCGCCTTTCTGGATGTATTATGTAGCCAAGACATTAACAGAGCAAGCAGCGCTTCAGTATGGATCAGATCATGGGATTGATGTGGTGACAATAGTGCCATCCCTCGTTGCTGGACCTTCTCTTACACCAACAATTCCGCTGAGCATTGCACAGACTTTAACCCCTATAACAGGCAATGAACAATTCTGTGGATATATAAAGGAGCT

Fln Alignment:

Contig32163___SFDSAVHGCDFVVHMATPTDYT-KDPETGVIQAAVNGTLDILSACTKAKSVKRVIYTSSITAASPLKDKGEYMDFVDESCWTNVDLIRREKPPFWMYYVAKTLTEQAALQYGSDH-GIDVVTIVPSLVAGPSLTPTIPLSIAQTLTPITGNEQ
D5ADN9_______________SFDAAINGCDGVFHVASPVDFTPKDPENDVIKPAVDGTLNVLRACTKAKTVKRVVVTSS-TASACINESEEQDQYIDETCWTDVDFLRSKEPPAWAYGVAKTLAEQAALQYGKDDAGLDVVTINPVLVVGSAITPNVPYTVGLTLSLLTGNDQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain