SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene30815

Length: 960 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene30815

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	coniferyl-alcohol glucosyltransferase [Arabidopsis thaliana] sp\|Q94A84.1\|U72E1_ARATH RecName: Full=UDP-glycosyltransferase 72E1 gb\|AAK83619.1\| AT3g50740/T3A5_120 [Arabidopsis thaliana] gb\|AAU90060.1\| At3g50740 [Arabidopsis thaliana] gb\|AEE78703.1\| conifer	-	-	2.0e-39	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Sma3	Anthocyanidin 3-O-glucosyltransferase	-	-	5.321e-07	-

Source	Gene names
Sma3	At3g50740; F18B3.20; GSVIVT00024129001; OSJNBa0082C09.34; OSJNBb0067G11.12; Os02g0242100; Os07g0672700; OsI_02897; OsI_15144; OsI_27293; OsJ_14081; P0470D12.134; P0503B05.5; POPTRDRAFT_1083426; POPTRDRAFT_731288; POPTRDRAFT_816627; T3A5.120; VITISV_032000

Source	GOs	Term	Type	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-
Sma3	coniferyl-alcohol glucosyltransferase activity	GO:0047209	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	lignin metabolic process	GO:0009808	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LR79

Fln msg: your sequence is shorter than subject: 253 - 482

Fln protein: RHLDSGGGGGKGVWVVGPMVEPPGREKIQSPRDGEIVAWLDRQTPGSVVYVAFGSESYISSAQVTELAVGLEASGQPFLWVLRPPGSTLGGNSASSAEKWKTEALPEGYERRLGAVCLIETCWAPQAAILAHEATGAFITHCGWNSVLESVAAAVPMITLPLHSDQPLNAILLAKEVKVAVELKTSDGVAKREEVEMAVRRVMAADEMKQRVKDLSMVAVAAVSKEGGAGKNVDSFINACLRFKNSSRKLVL*

Protein Length: 254

Fln nts: CGACACCTAGACAGCGGTGGAGGAGGCGGTAAGGGAGTGTGGGTTGTAGGGCCGATGGTTGAGCCGCCTGGGAGGGAGAAAATCCAGAGCCCCAGGGACGGGGAGATTGTGGCGTGGTTGGATCGCCAAACGCCCGGCTCCGTCGTGTACGTGGCGTTCGGGTCAGAATCGTATATTTCTTCGGCACAGGTAACAGAACTGGCGGTGGGTCTGGAGGCGAGCGGGCAGCCCTTCCTTTGGGTGCTGCGGCCACCCGGCTCGACACTTGGAGGTAACTCCGCATCGTCGGCGGAGAAATGGAAAACAGAGGCGCTGCCTGAGGGCTACGAGCGACGGCTTGGGGCAGTGTGCCTTATCGAGACCTGTTGGGCGCCACAGGCAGCTATTCTGGCGCACGAAGCGACGGGGGCTTTTATCACTCACTGCGGATGGAATTCGGTTCTGGAGAGCGTGGCGGCGGCCGTTCCGATGATCACCTTGCCACTACATTCGGACCAGCCGTTAAACGCTATCCTTCTGGCGAAGGAAGTGAAAGTGGCGGTGGAGTTGAAGACGAGTGATGGCGTGGCTAAAAGAGAGGAGGTAGAAATGGCGGTGCGAAGAGTAATGGCGGCGGATGAGATGAAGCAGAGGGTGAAGGATCTAAGTATGGTTGCGGTTGCGGCGGTTTCGAAAGAGGGCGGAGCAGGGAAAAATGTGGATTCATTTATCAACGCATGTCTTCGTTTTAAGAATAGTTCACGGAAATTAGTGTTGTAA___TCGTAGGTCTGAGTGCACAACTTCATTTAATAATTGATGATTGGTGGCTCCGTACCTATTGTCTTCGTCGTAATCGTAGGTCTGAGTGTACAACTTTACCTAATAATTGTTGATTGGTGGCTCCGGACCTATTATCTTTGGTTAAATGGTAAGAGGCCGTGTACGAAAAAATTAAAAATTTATATATTTGAATTGGTATAC

Fln Alignment:

Contig30815___PMVEPPGRE-KIQSPRDGEIVAWLDRQTPGSVVYVAFGSESYISSAQVTELAVGLEASGQPFLWVLRPPGSTLGGNSASSAEKWKTEALPEGYERRLGAVCLIETCWAPQAAILAHEATGAFITHCGWNSVLESVAAAVPMITLPLHSDQPLNAILLAKEVKVAVELKTSDGVAKREEVEMAVRRVMAAD--EMKQRVKDLSMVAVAAV-SKEGGAGKNVDSFI
B8LR79_______________PVIDLPDRDHKLHSPREGEILEWLGRQTRGSVVYVSFGTESHISPAQVMELAMGLEASGQPFLWVLRPPDSRLTVGS-SSAEDWKAELLPEGYERRVQGRCLIETGWAPQGAILAHEATGAFISHCGWNSCLESVAAGVPIIALPLQVDQPVNALLLAREAKVAVEMKIIDGIAERNEVERAVRRLMSGEGVEVKRRVEAVSKAAVSAIFHEEGDAWKTLDSFI

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
622	87		12		0.992554
924		25	75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain