SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene29252

Length: 1137 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene29252

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein phosphatase 2c [Medicago truncatula]	-	-	0.0	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%
Sma3	Protein phosphatase-2c, putative	-	-	2.26e-17	-

Source	ECs	Term	Type	e value	Identity
Sma3	Phosphoprotein phosphatase.	EC:3.1.3.16	-	0.0	-

Source	Gene names
Sma3	AT3G05640; At1g03590; At1g16220; At1g79630; At3g02750; At3g05640; At3g16800; At4g03415; At4g32950; At5g01700; At5g26010; At5g27930; At5g36250; F13E7.31; F14I23.90; F15F15.3; F18C1.9; F20B17.6; F21B7.20; F26P21.70; F3O9.3; F7A7.220; GSVIVT00003341001; GSVI

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	-
Sma3	solute:hydrogen antiporter activity	GO:0015299	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-
Sma3	cation transport	GO:0006812	Biological Process	-
Sma3	response to water deprivation	GO:0009414	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	IPR000194	-	-
Sma3	Protein phosphatase 2C, manganese/magnesium aspartate binding site	IPR000222	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	Cation/H+ exchanger	IPR006153	-	-
Sma3		IPR014045	-	-
Sma3	Protein phosphatase 2C	IPR015655	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G02750.3	Protein phosphatase 2C family protein chr3:593601-595457 REVERSE LENGTH=527	47%
RefSeq	Arabidopsis thaliana	NP_186924.1	putative protein phosphatase 2C 33 [Arabidopsis thaliana]	53%
RefSeq	Populus trichocarpa	XP_002328995.1	predicted protein [Populus trichocarpa]	51%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLH8

Fln msg: Distance to subject end: 216 aas, your sequence is shorter than subject: 297 - 526

Fln protein: MGSCISSWGHQGLQTAGEQPWKKEIDAATAEALAMEAEKDEQLAGVEGRLCTNGASSLASIYTQQGKKGINQDSMIIWEFESQENFGSHENISFLGVFDGHGPYGHLVSKRVRNSLPGLLMNQWQELLLTEWPSHANLSNFEADDSNKLLNDSDGAMHKEESNMFAAWKESHLRAFKVMDKELKLHPILDCFCSGTTAVTIIKQGRDLVIANVGDSRAILGTMSADGNLTAIQLTVDLKPTLPGEAERIKQCKGRVHALKDEPHVHRVWLPNENSPGLAMTRAFGDFCLKDFGVIAV

Protein Length: 298

Fln nts: AATTGCATCCCGTGAGACTCGGTCTTTGAATCCAATTGCATCTCGAAAATGCGCTATAATTTCCCATTATATCTCGTGCAAGCTTTTGAACTTTCATCTCTGTGACAAAATGGCTTCAGTGCCTCTCCAGTCACAAGCTCTGTTTACTTTGCTTGTATTCTGCAAGGCAGCCTTTATGGAGAAAAATGGCGGGTAAATCTTGATATTTGCTCTTAGTACTGAGAAGAGGCATTTGGAGTCAGGTC_-_ATGGGGTCTTGCATATCGTCCTGGGGGCATCAGGGTCTTCAGACTGCAGGAGAGCAACCGTGGAAGAAGGAAATTGATGCTGCAACAGCCGAGGCTCTGGCGATGGAGGCCGAGAAGGACGAACAACTTGCAGGCGTGGAAGGCAGACTTTGTACCAATGGTGCTAGCAGTCTTGCCAGCATTTATACCCAGCAAGGAAAGAAAGGAATCAATCAGGATTCCATGATCATATGGGAGTTTGAGTCGCAAGAGAATTTTGGGTCGCATGAAAACATAAGCTTCCTTGGAGTTTTTGACGGGCATGGTCCGTACGGACACTTGGTTAGCAAAAGGGTTAGAAACTCTCTGCCTGGCTTGCTTATGAACCAGTGGCAAGAACTGCTGTTAACTGAATGGCCTAGTCATGCAAATCTTAGCAATTTTGAGGCCGATGATTCAAACAAATTGCTCAATGATTCGGATGGGGCTATGCACAAAGAAGAGTCCAATATGTTTGCTGCCTGGAAGGAATCTCATCTGCGAGCTTTCAAGGTGATGGATAAGGAACTCAAGCTGCATCCCATCTTGGATTGCTTCTGCAGTGGAACGACTGCCGTGACCATCATCAAACAGGGACGGGACCTTGTCATTGCAAATGTTGGAGACTCTCGGGCTATTCTGGGAACAATGTCTGCTGATGGAAATTTGACAGCCATTCAGTTGACAGTTGACCTGAAGCCAACCTTACCTGGGGAGGCAGAAAGGATAAAGCAGTGCAAAGGCCGAGTCCATGCTCTAAAAGATGAACCCCATGTGCATAGAGTATGGTTACCGAATGAAAACTCCCCGGGTCTTGCCATGACCCGGGCCTTTGGAGATTTTTGTCTCAAGGACTTTGGTGTTATCGCCGTCC

Fln Alignment:

Contig29252___DEQLAGVEGRLCTNGASSLASIYTQQGKKGINQDSMIIWEFESQENFGSHENISFLGVFDGHGPYGHLVSKRVRNSLPGLLMNQWQELLLTEWPSHANLSNFEADDSNKLLNDSDGAMHKEES----------------------NMFAAWKESHLRAFKVMDKELKLHPILDCFCSGTTAVTIIKQGRDLVIANVGDSRAILGTMSADGNLTAIQLTVDLKPTLPGEAERIKQCKGRVHALKDEPHVHRVWLPNENSPGLAMTRAFGDFCLKDFGVIAV
B8LLH8_______________DEQISRIPGRMFGNGASNVACMFTQQGRKGTNQDAMLVWE-----DFGSRKDTVFCGVFDGHGPFGHLVAKKVRDSLPSKLSNQWE-------------AEMKDDDSIKEANSTVGSMNSEESLSVTMDDEWRESADMEEREKCPEIFLTLKESFLKAFKVMDKELRLHPTIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRVQDNSLSAVQLTVDLKPNLPREAERIRQCKGRVFALHDEPEVSRVWLPHNDSPGLAMARAFGDFCLKDFGLIAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain