SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene29102

Length: 711 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene29102 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Glutamate decarboxylase n=2 Tax=Pinaceae RepID=A0EJ89_PINPS	-	-	5.04467e-44	61%
FL-Next	tr=Glutamate decarboxylase; Pinus pinaster (Maritime pine).	-	-	0.0	61%
Sma3	Glutamate decarboxylase	-	-	5.35296e-42	-

Source	ECs	Term	Type	e value	Identity
Sma3	Glutamate decarboxylase.	EC:4.1.1.15	-	0.0	-

Source	KEGGs	Term	Identity
Sma3	Alanine, aspartate and glutamate metabolism	00250	%
Sma3	beta-Alanine metabolism	00410	%
Sma3	Butanoate metabolism	00650	%
Sma3	Metabolic pathways	01100	%
Sma3	Biosynthesis of secondary metabolites	01110	%

Source	Gene names
Sma3	At1g65960; At2g02000; At2g02000/F14H20.7; At2g02010; At3g17760; At5g17330; B1377B10.13; F12P19.12; GAD; GAD1; GAD2; GAD3; GAD4a; GAD4b; GDH1; GDH2; GSVIVT00006041001; GSVIVT00023485001; GSVIVT00030677001; GSVIVT00030679001; LOC_Os03g13300; LOC_Os03g51080;

Source	GOs	Term	Type	Identity
Sma3	glutamate decarboxylase activity	GO:0004351	Molecular Function	-
Sma3	calmodulin binding	GO:0005516	Molecular Function	-
Sma3	carboxy-lyase activity	GO:0016831	Molecular Function	-
Sma3	pyridoxal phosphate binding	GO:0030170	Molecular Function	-
Sma3	glutamate metabolic process	GO:0006536	Biological Process	-
Sma3	carboxylic acid metabolic process	GO:0019752	Biological Process	-
Sma3	response to cadmium ion	GO:0046686	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Pyridoxal phosphate-dependent decarboxylase	IPR002129	-	-
Sma3	Glutamate decarboxylase	IPR010107	-	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	IPR015421	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G02000.1	GAD3 glutamate decarboxylase 3 chr2:469505-471997 REVERSE LENGTH=500	65%
RefSeq	Arabidopsis thaliana	NP_178309.1	glutamate decarboxylase 3 [Arabidopsis thaliana]	65%
RefSeq	Populus trichocarpa	XP_002327596.1	predicted protein [Populus trichocarpa]	66%

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain