SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene29091

Length: 536 nt

UniGene Fasta

>sp_v3.0_unigene29091
AAGTGGACGACTACGTTAGCTTTCTGTGTACCCTAAACTTACACAGCAAAGCAAATTCATATTCTGACAAGGCAGGCAACATCCTGCCCCAAACTTACGCTCCGCGCCGGGAGATCTCAACTACCCATCATTCTCGGTGGTGTTTAAGCCGCGTAGTTTGGTTCGTGTTACGAGGAGAACCGTGACGAACGTTGGAGGAGCACCGTGTGTATATGAAATGGCAGTCGAGAGCCCTGAAAACGTAAATATAACCGTGCAGCCAACGACGCTCGCCTTCGAAAAGCAAAACCAGAAGGCGACTTATACAGTGACATTTGAAAGCAAAATTGCAGCTGACCACAAACCTAAAGGACGCCAAGCCTTTGGTCAAATATTGTGGAAATGCGTGAAGGGCGGAACGCAAGTTGTTCGCAGTCCTGTGGCCATAGCCTGGACAGTGGAGTGATGAAGAATGAGTGGACTGGCCCAGTTGTTCGTCTGTGGGCCTCTAGTTTGAATAAAAGTAGAAGCCATCCATCCATGAAGATGTAACGCAT

Ace file of the UniGene sp_v3.0_unigene29091

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative cucumisin-like serine protease [Oryza sativa Japonica Group] gb\|AAP53584.1\| Subtilisin N-terminal Region family protein, expressed [Oryza sativa Japonica Group]	-	-	6.0e-15	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Protease-associated domain, PA	IPR003137	-	-
Sma3	Proteinase inhibitor I9	IPR010259	-	-
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G14067.1	Subtilase family protein chr3:4658421-4660754 REVERSE LENGTH=777	7.0e-16	46%
RefSeq	Arabidopsis thaliana	NP_566473.2	Subtilase family protein [Arabidopsis thaliana]	8.0e-16	46%
RefSeq	Populus trichocarpa	XP_002326128.1	predicted protein [Populus trichocarpa]	2.0e-18	47%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQQ7

Fln msg: Unexpected stop codon in the beginning of your sequence, your sequence is shorter than subject: 148 - 772

Fln protein: SGRLR*LSVYPKLTQQSKFIF*QGRQHPAPNLRSAPGDLNYPSFSVVFKPRSLVRVTRRTVTNVGGAPCVYEMAVESPENVNITVQPTTLAFEKQNQKATYTVTFESKIAADHKPKGRQAFGQILWKCVKGGTQVVRSPVAIAWTVE*

Protein Length: 149

Fln nts: AAGTGGACGACTACGTTAGCTTTCTGTGTACCCTAAACTTACACAGCAAAGCAAATTCATATTCTGACAAGGCAGGCAACATCCTGCCCCAAACTTACGCTCCGCGCCGGGAGATCTCAACTACCCATCATTCTCGGTGGTGTTTAAGCCGCGTAGTTTGGTTCGTGTTACGAGGAGAACCGTGACGAACGTTGGAGGAGCACCGTGTGTATATGAAATGGCAGTCGAGAGCCCTGAAAACGTAAATATAACCGTGCAGCCAACGACGCTCGCCTTCGAAAAGCAAAACCAGAAGGCGACTTATACAGTGACATTTGAAAGCAAAATTGCAGCTGACCACAAACCTAAAGGACGCCAAGCCTTTGGTCAAATATTGTGGAAATGCGTGAAGGGCGGAACGCAAGTTGTTCGCAGTCCTGTGGCCATAGCCTGGACAGTGGAGTGA___TGAAGAATGAGTGGACTGGCCCAGTTGTTCGTCTGTGGGCCTCTAGTTTGAATAAAAGTAGAAGCCATCCATCCATGAAGATGTAACGCAT

Fln Alignment:

Contig29091___PNLRSAPGDLNYPSFSVVFKPRSLXXXXXXXXXNVGGAPCVYEMAVESPENVNITVQPTTLAFEKQNQKATYTVTFESKIAADHKPKGRQAFGQILWKCVKGGTQVVRSPVAIAW
B8LQQ7_______________PKLRSRPGDLNYPSFSVVFKPRSLVRVTRRTVTNVGGAPSVYEMAVESPENVNVIVEPRTLAFTKQNEKATYTVRFESKIASDNKSKRHRGFGQILWKCVKGGTQVVRSPVAIAW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain