SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene29048

Length: 5411 nt

UniGene Fasta

>sp_v3.0_unigene29048
TGGTCCTAGACGCTTTCTCGATATAGCGGGAATTGTTGCGAGCTCGTTCTACCCAAATGGTTTCTGGAACCCCTTTACTGGAGCGGTACTGCAGGCCTGATGCGAACGGAGCCTGGATAACCTTGGTAAAAGTGCTTTCGGCGGTTACACGCCCTGTGCCACTGAAACCATCGTGGTTTCTCTGTCGCATTTGGTTCTTTGGTGCTTAATTTGTTACAGGATTTATCTCATCCGGAAGGATTTATCCATCAAGAGGTTTTGCCTGCAATCCCGCTATTATAACTATGGATTGGCTCTGGTCGCAGCCTATAATACGGCCGAGCCGTTGTTTAGGGCCGTCATGGGGCTATCTGTTGTTAATCTGGACGGGCCGGCGTCGCTTCCTCCCTTCGAGGTTGTAACTTTGCTAATCGAGAGTATCACTTGGTGCACTATGCTGGCATTGCTCTTTATCGAAACCAAAATTTATATAAGGGAATTTAGATGGTATATTCGGTTTGCAGTTATTTATGTTCTTGTTGGGGATGCTACATTGCTGAGACTTGTACTCACTGTCAAAGATTACTGTGACAAGTATGTTCTGAATTTGTACATCAGTGAGATATTATGCCAGGCTATATTTTGCATATTACTGCTATTTTATCTACCCAACTTGGTTCCGTATTCTGGGTACATTCCTGTTGAGCGTGAAGATTGTAGTGCAGCTTCAGTGGAGTATGAACCTCTTCCAGATGGGGACATGATTTGTCCTGAGCGACATGTGCATTTCTTTTCCAAAATCTTTTTTGAATGGATGACACCCCTCATGAAGCTAGGCTATCAAAAGCCTATTACAGAGTCGGATGTTTGGAAGCTTGATACTTGGGATCAGACTGAGAATCTTTACAATAATTTCCAGCGACGTTGGGAAGAAGAAAGTACCAAATCCAAACCATGGCTATTAAGGGCATTGAATCGTAGTCTTGGAGGACGATTCTGGTTTGGAGGTTTATTCAAGATTGGAAATGATGCTTCACAATTTGTTGGTCCGATTGTTTTAGGCCTTCTACTGGAGTCAATGCAACGCGGGGAACCTTCATGGATTGGTTACTTGTATGCAACATTAATCTTTCTAGGAGTGTTCGTTGGTGTACTATCAGAAGCACAGTACTTCCAGAATGTTATGCGTGTTGGTTACCGTATCAGGGCAACCTTGGTTGCTGCTGTATTTCGGAAAACATTGAGGTTGACACACGAAGGCCGCAAGAAATTTGCTTCTGGAAGAATAACCAACATGATGACTCAAGATGCTGAAGCTCTCCAGCAAATTTGCCAACAGGTGCATGGCCTCTGGTCAGCACCTCTACGTATTGTTGTTGCTATTGTTCTACTCTATAAACAACTTGGTGTGGCATCACTGTTTGGTGCATCAGTATTGGTGCTTCTGTTCCCAGTACAGACATTTATCATTAGTAGGATGCAAAAACTATCAAAGGAAGGATTGCAGCGTACAGACAAGAGGATTGGTCTCATGAATGAAATTCTGGCTGCAATGGACACGGTCAAATGCTATGCATGGGAAAATAGTTTTCGGTCAAAGGTCCAGACTATTAGGAATGATGAGCTCAGCTGGTTTAGGAAGGCACAATTATTGGGATCGTGCAACAGCTTCATTCTGAATAGTATTCCAATCGTTGTTACTGTGCTTGCTTTTGGGCTGTATACTTTGCTTGGTGGTCAATTGACAGCTGCAAAAGCCTTTTCATCTCTTTCCTTGTTTGCAGTATTGAGATTTCCACTCTTTATGTTCCCAAACTTGATAACTCAGGTTGTTAATGCTAATGTGTCATTGAAAAGACTAGAGGATCTGTTTTTGGCAGAAGAAAGAATATTGCAACCAAATCCACCCATTCAGGCAGGCCTGCCTGCTATATCAATTAAAAATGGAACTTTTTCTTGGGACAAAAAGGCAGAGAAAGCTACACTATCCAACATTCATCTTGATATCTCTGTTGGGAGTCTTGTTGCTGTTGTTGGTAGTACAGGCGAGGGTAAAACTTCTTTGATCTCAGCAATACTTGGAGAGATACCTGCGGTTTCAGAGACGGAGGTAGTTGTCAGGGGAAGTGTTGCATATGTTCCACAAGTTTCATGGATCTTCAATGCAACAGTCCGTGACAACATCTTGTTTGGGTCTCCTTATGATCCGTTACGTTATGAAAAAGCAATCCATGTCAGTGCATTGGAACATGATCTTCAGTCATTGCCAGGTGGTGATCTTACAGAAATTGGTGAAAGAGGAGTGAACATTAGTGGTGGCCAAAAGCAAAGAGTTTCTATTGCCAGGGCTGTATATGCTAACACAGATGTTTATATATTTGATGATCCTCTAAGTGCACTCGATGCCCATGTTGGCCGTCAGGTATTTGAGAAATGCCTCAAGGATGAACTCAAGGGGAAAACACAAGTTTTGGTTACCAATCAACTGCATTTTCTTCCGCATGTGGATAGAATTATTTTGATTGGCGAGGGTATGATTAAAGAAGAGGGAACATATGAAGAGCTCATCAGCCGTGGGCCATTATTTCAGAAATTGATGGAAAATGCTGGAAAAATGGAAGATGAGATAGAAGAAGGCATTCCTAATGGGCATCATGAACCAAAGTTGTCTACTGCTGAGGTTAATGGTGAGCAAATGAAGAGTGATCAAAATCCATCATCCAAGAAAACAAGCAGCAAGACAAAGGAGGGAAAATCAGTTCTCATAAAGCAAGAAGAGCGTGAGACAGGAGTTGTGAGTTTGAAAGTCCTTCAGAGATACAAAAATGCACTAGGAGGATTATGGGTGGTTCTTATTTTGCTTTCATGTTACGTGGCATCAGAAGTTTTGAGAGTCTCAAGCAGTACATGGTTAAGTGTGTGGACAGATGAAACTGCTCCAAAGGGACATGGGCCTCAGTTTTATAACATTATTTACGCTGTTCTATCTTTTGGCCAGGTATTGGTAACATTGACGAACTCATTTTGGCTGGTTCTATCAAGCCTGTATGCTGCTAAGAAGTTGCATGACAGTATGCTCAGTTCCATCTTAAGGGCTCCAATGTCATTCTTCCAGACCAATCCAATTGGACGAATTATCAACAGATTTGCAAAGGACTTGGGGGATATAGATAGGAATGTTGCTGTCTTTACCAATATGTTTCTGAGCCAAGTTTTCCAGCTTCTTTCAACATTTATTTTGATAGGAACTGTGAGCACAATATCTCTGTGGGCAATAATGCCACTTCTGATTGTCTTTTATGCAGCATACTTGTACTACCAGAGTACTGCACGTGAGGTTAAACGCTTGGATTCCATCACGCGGTCACCAGTTTATGCACAGTTTGGGGAGGCATTAAATGGTTTGGCTGCAATTCGTGCATACCAAGCATATGACCGCATGGCAACGATCAATGGGAAGACAATGGACAATAATATCAGGTTTACATTGGTAAACATGAGCTCCAATCGCTGGCTTGGTATAAGACTGGAAACTTTAGGGGGTCTTATGATCTGGTTGACAGCAATATTTGCTGTTATGCAGAATCAACGTGCTAATTCAGCAGCATTTGCTCCATTGATGGGTCTACTCCTTAGTTATACCTTAAATATTACTAGTCTGTTGACAAATACCTTACGGTTAGCAAGTATGGCAGAGAATAGTTTTAATGCTGTAGAAAGAGTTGGGAACTATATAGAGTTGCCTCCTGAAGCCCCACTTATTATTGATAACAACAGGCCACCACCTGGGTGGCCTTCATCTGGAGTCATTGAATACAAAAAAGTTGTAATGCGGTATCGTCAAGAACTTCCTCCTGTTATTCATGATGTATCGTTCAGAGTAATGGCAAGTGAGAAAGTTGGAATAGTTGGACGCACTGGTGCAGGAAAGTCAAGCATGTTCAATACATTGTTCCGCATTGTTGAACTAGAGAGTGGAAATATTCTCATTGATGAATGCGACATTTCTAAGATTGGATTGGCTGATTTGCGCAAAGCGTTAGGCATCATACCACAAGCACCAGTTCTATTTTCAGGGACGGTACGGTTCAATCTTGATCCATTTGGTGAACATAATGATGCTGATCTTTGGGAGTCTTTGGAAAGGGCACATTTAAAAGATGTTATCAGGAGAAATTCTTTGGGACTTGATACTGAGGTCTCTGAGGCCGGTGATAACTTCAGTGTGGGCCAACGCCAACTACTAAGCCTTGCTCGTGCCCTGCTCCGGAGATCAAAGATTTTAGTTCTTGATGAAGCCACGGCAGCTGTGGATGTTGCAACAGATGCTCTTATCCAAAGGACCATCCGTGAAGAATTTAGATCTTGTACAATGCTTGTCATTGCTCATCGAATTAATACTATCATTGATTGTGACCGTATACTGGTCCTTGAAGCCGGTCAAGTTTTGGAATTTGATACTCCTGAGAATCTACTTTCTAATGAAGACAGTGCATTTTCGAAAATGGTTCAAAGCACTGGATCTGCTAATGCACAATATTTGCGGAGTATAGTTCTGGGAGATCCAAACAGTAGAGAGGGCTTTGAAAACAGAGCAACTGAAAAGAAAAGGAAGTGGAATGCCTCTGCACGATGGGCTGCTGCAGCCCAATTTGCCCTTGCCTTGAGTTTAACTTCTTCACAGCAAGATCTGCAAGCAATTGCTGAGGGAGGAAATGACAACAACATTCTTCAGGAGACAAGGAATGCAGCTCAGATCCTGCAGGATGTTTTGCAAGGAAAGCATGACAGTGCTATTGAAGAGGCATTAGTCCAGCATCAAGTACCGAGGGAAAATTGGTGGTCTGCACTCTTTAAAGTTGTGGAAGGTTTGGCTGTAATGAGTCGATTGGCACGAAACAGATTTTATCAAGATGAGTCTATAATTGAAGGGAGAGATATTGTGTGGGACGATCTGACTATATGATGAATCATCTCTATATTTTTGAATTTCTGTTGAAGCTTCTGATTGAGAATTGATAGGAATCTCGAGATCAATTATTGCCTATTAATATAATTCTTAAATTTCAGCAGTGGATTGTTTTTCCCGTGCGGTAATTAACTCATTTGCAAGTTTATGTATCACAGAAGTTCCAGATGTCATTGTAATGCATTGTGCATTTAAACTCTAGAAATTGGTATTTCCATTCCGTGTGTCAAAGAATGGAATGTTGTAAACAATAGAAGTATATCATAGTCCAAGAGGCCAAATGATTTGAATGGGCAATAGAGAAACATTTATTGAAATGAAAAGAAACCTATTCCGAACCAACTTTTGTGCTGTCCAGTACAAGGTCATTTTCAACATTCACCTTAAATAGAGGATAAGTGTTGCTGATCTTAATGTCTTCTGACTCTTATGTTTTGTTGATTTCTAATTTTCTTATAAAGTA

Ace file of the UniGene sp_v3.0_unigene29048

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ABC transporter C family member 2 [Arabidopsis thaliana] ref\|NP_001189675.1\| ABC transporter C family member 2 [Arabidopsis thaliana] sp\|Q42093.2\|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN	-	-	0.0	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	31%
Sma3	Multidrug resistance protein ABC transporter family	-	-	7.709e-17	-

Source	ECs	Term	Type	e value	Identity
Sma3	Xenobiotic-transporting ATPase.	EC:3.6.3.44	-	7.208e-10	-

Source	Gene names
Sma3	At1g30400; At1g30410; At1g30420; At2g34660; EST1; EST4; F26G16.1; GSVIVT00002488001; GSVIVT00028387001; GSVIVT00028389001; GSVIVT00028391001; GSVIVT00028392001; GSVIVT00028393001; GSVIVT00028470001; H0714H04.5; MRP1; MRP11; MRP12; MRP13; MRP2; OSJNBa0058K

Source	GOs	Term	Type	Identity
Sma3	plant-type vacuole	GO:0000325	Cellular Component	-
Sma3	vacuolar membrane	GO:0005774	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	calmodulin binding	GO:0005516	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	xenobiotic-transporting ATPase activity	GO:0008559	Molecular Function	-
Sma3	ATPase activity	GO:0016887	Molecular Function	-
Sma3	ATPase activity, coupled to transmembrane movement of substances	GO:0042626	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ABC transporter, transmembrane domain	IPR001140	-	-
Sma3	Proteinase inhibitor I3, Kunitz legume	IPR002160	-	-
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	ABC transporter, integral membrane type 1	IPR017940	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G34660.1	ATMRP2, EST4, MRP2, ABCC2, AtABCC2 multidrug resistance-associated protein 2 chr2:14603267-14612387 FORWARD LENGTH=1623	70%
RefSeq	Arabidopsis thaliana	NP_001189675.1	ABC transporter C family member 2 [Arabidopsis thaliana]	70%
RefSeq	Populus trichocarpa	XP_002317351.1	multidrug resistance protein ABC transporter family [Populus trichocarpa]	72%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5ABW1

Fln msg: your sequence is longer than subject: 1535 - 316

Fln protein: MGLSVVNLDGPASLPPFEVVTLLIESITWCTMLALLFIETKIYIREFRWYIRFAVIYVLVGDATLLRLVLTVKDYCDKYVLNLYISEILCQAIFCILLLFYLPNLVPYSGYIPVEREDCSAASVEYEPLPDGDMICPERHVHFFSKIFFEWMTPLMKLGYQKPITESDVWKLDTWDQTENLYNNFQRRWEEESTKSKPWLLRALNRSLGGRFWFGGLFKIGNDASQFVGPIVLGLLLESMQRGEPSWIGYLYATLIFLGVFVGVLSEAQYFQNVMRVGYRIRATLVAAVFRKTLRLTHEGRKKFASGRITNMMTQDAEALQQICQQVHGLWSAPLRIVVAIVLLYKQLGVASLFGASVLVLLFPVQTFIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWENSFRSKVQTIRNDELSWFRKAQLLGSCNSFILNSIPIVVTVLAFGLYTLLGGQLTAAKAFSSLSLFAVLRFPLFMFPNLITQVVNANVSLKRLEDLFLAEERILQPNPPIQAGLPAISIKNGTFSWDKKAEKATLSNIHLDISVGSLVAVVGSTGEGKTSLISAILGEIPAVSETEVVVRGSVAYVPQVSWIFNATVRDNILFGSPYDPLRYEKAIHVSALEHDLQSLPGGDLTEIGERGVNISGGQKQRVSIARAVYANTDVYIFDDPLSALDAHVGRQVFEKCLKDELKGKTQVLVTNQLHFLPHVDRIILIGEGMIKEEGTYEELISRGPLFQKLMENAGKMEDEIEEGIPNGHHEPKLSTAEVNGEQMKSDQNPSSKKTSSKTKEGKSVLIKQEERETGVVSLKVLQRYKNALGGLWVVLILLSCYVASEVLRVSSSTWLSVWTDETAPKGHGPQFYNIIYAVLSFGQVLVTLTNSFWLVLSSLYAAKKLHDSMLSSILRAPMSFFQTNPIGRIINRFAKDLGDIDRNVAVFTNMFLSQVFQLLSTFILIGTVSTISLWAIMPLLIVFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLAAIRAYQAYDRMATINGKTMDNNIRFTLVNMSSNRWLGIRLETLGGLMIWLTAIFAVMQNQRANSAAFAPLMGLLLSYTLNITSLLTNTLRLASMAENSFNAVERVGNYIELPPEAPLIIDNNRPPPGWPSSGVIEYKKVVMRYRQELPPVIHDVSFRVMASEKVGIVGRTGAGKSSMFNTLFRIVELESGNILIDECDISKIGLADLRKALGIIPQAPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDVIRRNSLGLDTEVSEAGDNFSVGQRQLLSLARALLRRSKILVLDEATAAVDVATDALIQRTIREEFRSCTMLVIAHRINTIIDCDRILVLEAGQVLEFDTPENLLSNEDSAFSKMVQSTGSANAQYLRSIVLGDPNSREGFENRATEKKRKWNASARWAAAAQFALALSLTSSQQDLQAIAEGGNDNNILQETRNAAQILQDVLQGKHDSAIEEALVQHQVPRENWWSALFKVVEGLAVMSRLARNRFYQDESIIEGRDIVWDDLTI*

Protein Length: 1536

Fln nts: TGGTCCTAGACGCTTTCTCGATATAGCGGGAATTGTTGCGAGCTCGTTCTACCCAAATGGTTTCTGGAACCCCTTTACTGGAGCGGTACTGCAGGCCTGATGCGAACGGAGCCTGGATAACCTTGGTAAAAGTGCTTTCGGCGGTTACACGCCCTGTGCCACTGAAACCATCGTGGTTTCTCTGTCGCATTTGGTTCTTTGGTGCTTAATTTGTTACAGGATTTATCTCATCCGGAAGGATTTATCCATCAAGAGGTTTTGCCTGCAATCCCGCTATTATAACTATGGATTGGCTCTGGTCGCAGCCTATAATACGGCCGAGCCGTTGTTTAGGGCCGTC_-_ATGGGGCTATCTGTTGTTAATCTGGACGGGCCGGCGTCGCTTCCTCCCTTCGAGGTTGTAACTTTGCTAATCGAGAGTATCACTTGGTGCACTATGCTGGCATTGCTCTTTATCGAAACCAAAATTTATATAAGGGAATTTAGATGGTATATTCGGTTTGCAGTTATTTATGTTCTTGTTGGGGATGCTACATTGCTGAGACTTGTACTCACTGTCAAAGATTACTGTGACAAGTATGTTCTGAATTTGTACATCAGTGAGATATTATGCCAGGCTATATTTTGCATATTACTGCTATTTTATCTACCCAACTTGGTTCCGTATTCTGGGTACATTCCTGTTGAGCGTGAAGATTGTAGTGCAGCTTCAGTGGAGTATGAACCTCTTCCAGATGGGGACATGATTTGTCCTGAGCGACATGTGCATTTCTTTTCCAAAATCTTTTTTGAATGGATGACACCCCTCATGAAGCTAGGCTATCAAAAGCCTATTACAGAGTCGGATGTTTGGAAGCTTGATACTTGGGATCAGACTGAGAATCTTTACAATAATTTCCAGCGACGTTGGGAAGAAGAAAGTACCAAATCCAAACCATGGCTATTAAGGGCATTGAATCGTAGTCTTGGAGGACGATTCTGGTTTGGAGGTTTATTCAAGATTGGAAATGATGCTTCACAATTTGTTGGTCCGATTGTTTTAGGCCTTCTACTGGAGTCAATGCAACGCGGGGAACCTTCATGGATTGGTTACTTGTATGCAACATTAATCTTTCTAGGAGTGTTCGTTGGTGTACTATCAGAAGCACAGTACTTCCAGAATGTTATGCGTGTTGGTTACCGTATCAGGGCAACCTTGGTTGCTGCTGTATTTCGGAAAACATTGAGGTTGACACACGAAGGCCGCAAGAAATTTGCTTCTGGAAGAATAACCAACATGATGACTCAAGATGCTGAAGCTCTCCAGCAAATTTGCCAACAGGTGCATGGCCTCTGGTCAGCACCTCTACGTATTGTTGTTGCTATTGTTCTACTCTATAAACAACTTGGTGTGGCATCACTGTTTGGTGCATCAGTATTGGTGCTTCTGTTCCCAGTACAGACATTTATCATTAGTAGGATGCAAAAACTATCAAAGGAAGGATTGCAGCGTACAGACAAGAGGATTGGTCTCATGAATGAAATTCTGGCTGCAATGGACACGGTCAAATGCTATGCATGGGAAAATAGTTTTCGGTCAAAGGTCCAGACTATTAGGAATGATGAGCTCAGCTGGTTTAGGAAGGCACAATTATTGGGATCGTGCAACAGCTTCATTCTGAATAGTATTCCAATCGTTGTTACTGTGCTTGCTTTTGGGCTGTATACTTTGCTTGGTGGTCAATTGACAGCTGCAAAAGCCTTTTCATCTCTTTCCTTGTTTGCAGTATTGAGATTTCCACTCTTTATGTTCCCAAACTTGATAACTCAGGTTGTTAATGCTAATGTGTCATTGAAAAGACTAGAGGATCTGTTTTTGGCAGAAGAAAGAATATTGCAACCAAATCCACCCATTCAGGCAGGCCTGCCTGCTATATCAATTAAAAATGGAACTTTTTCTTGGGACAAAAAGGCAGAGAAAGCTACACTATCCAACATTCATCTTGATATCTCTGTTGGGAGTCTTGTTGCTGTTGTTGGTAGTACAGGCGAGGGTAAAACTTCTTTGATCTCAGCAATACTTGGAGAGATACCTGCGGTTTCAGAGACGGAGGTAGTTGTCAGGGGAAGTGTTGCATATGTTCCACAAGTTTCATGGATCTTCAATGCAACAGTCCGTGACAACATCTTGTTTGGGTCTCCTTATGATCCGTTACGTTATGAAAAAGCAATCCATGTCAGTGCATTGGAACATGATCTTCAGTCATTGCCAGGTGGTGATCTTACAGAAATTGGTGAAAGAGGAGTGAACATTAGTGGTGGCCAAAAGCAAAGAGTTTCTATTGCCAGGGCTGTATATGCTAACACAGATGTTTATATATTTGATGATCCTCTAAGTGCACTCGATGCCCATGTTGGCCGTCAGGTATTTGAGAAATGCCTCAAGGATGAACTCAAGGGGAAAACACAAGTTTTGGTTACCAATCAACTGCATTTTCTTCCGCATGTGGATAGAATTATTTTGATTGGCGAGGGTATGATTAAAGAAGAGGGAACATATGAAGAGCTCATCAGCCGTGGGCCATTATTTCAGAAATTGATGGAAAATGCTGGAAAAATGGAAGATGAGATAGAAGAAGGCATTCCTAATGGGCATCATGAACCAAAGTTGTCTACTGCTGAGGTTAATGGTGAGCAAATGAAGAGTGATCAAAATCCATCATCCAAGAAAACAAGCAGCAAGACAAAGGAGGGAAAATCAGTTCTCATAAAGCAAGAAGAGCGTGAGACAGGAGTTGTGAGTTTGAAAGTCCTTCAGAGATACAAAAATGCACTAGGAGGATTATGGGTGGTTCTTATTTTGCTTTCATGTTACGTGGCATCAGAAGTTTTGAGAGTCTCAAGCAGTACATGGTTAAGTGTGTGGACAGATGAAACTGCTCCAAAGGGACATGGGCCTCAGTTTTATAACATTATTTACGCTGTTCTATCTTTTGGCCAGGTATTGGTAACATTGACGAACTCATTTTGGCTGGTTCTATCAAGCCTGTATGCTGCTAAGAAGTTGCATGACAGTATGCTCAGTTCCATCTTAAGGGCTCCAATGTCATTCTTCCAGACCAATCCAATTGGACGAATTATCAACAGATTTGCAAAGGACTTGGGGGATATAGATAGGAATGTTGCTGTCTTTACCAATATGTTTCTGAGCCAAGTTTTCCAGCTTCTTTCAACATTTATTTTGATAGGAACTGTGAGCACAATATCTCTGTGGGCAATAATGCCACTTCTGATTGTCTTTTATGCAGCATACTTGTACTACCAGAGTACTGCACGTGAGGTTAAACGCTTGGATTCCATCACGCGGTCACCAGTTTATGCACAGTTTGGGGAGGCATTAAATGGTTTGGCTGCAATTCGTGCATACCAAGCATATGACCGCATGGCAACGATCAATGGGAAGACAATGGACAATAATATCAGGTTTACATTGGTAAACATGAGCTCCAATCGCTGGCTTGGTATAAGACTGGAAACTTTAGGGGGTCTTATGATCTGGTTGACAGCAATATTTGCTGTTATGCAGAATCAACGTGCTAATTCAGCAGCATTTGCTCCATTGATGGGTCTACTCCTTAGTTATACCTTAAATATTACTAGTCTGTTGACAAATACCTTACGGTTAGCAAGTATGGCAGAGAATAGTTTTAATGCTGTAGAAAGAGTTGGGAACTATATAGAGTTGCCTCCTGAAGCCCCACTTATTATTGATAACAACAGGCCACCACCTGGGTGGCCTTCATCTGGAGTCATTGAATACAAAAAAGTTGTAATGCGGTATCGTCAAGAACTTCCTCCTGTTATTCATGATGTATCGTTCAGAGTAATGGCAAGTGAGAAAGTTGGAATAGTTGGACGCACTGGTGCAGGAAAGTCAAGCATGTTCAATACATTGTTCCGCATTGTTGAACTAGAGAGTGGAAATATTCTCATTGATGAATGCGACATTTCTAAGATTGGATTGGCTGATTTGCGCAAAGCGTTAGGCATCATACCACAAGCACCAGTTCTATTTTCAGGGACGGTACGGTTCAATCTTGATCCATTTGGTGAACATAATGATGCTGATCTTTGGGAGTCTTTGGAAAGGGCACATTTAAAAGATGTTATCAGGAGAAATTCTTTGGGACTTGATACTGAGGTCTCTGAGGCCGGTGATAACTTCAGTGTGGGCCAACGCCAACTACTAAGCCTTGCTCGTGCCCTGCTCCGGAGATCAAAGATTTTAGTTCTTGATGAAGCCACGGCAGCTGTGGATGTTGCAACAGATGCTCTTATCCAAAGGACCATCCGTGAAGAATTTAGATCTTGTACAATGCTTGTCATTGCTCATCGAATTAATACTATCATTGATTGTGACCGTATACTGGTCCTTGAAGCCGGTCAAGTTTTGGAATTTGATACTCCTGAGAATCTACTTTCTAATGAAGACAGTGCATTTTCGAAAATGGTTCAAAGCACTGGATCTGCTAATGCACAATATTTGCGGAGTATAGTTCTGGGAGATCCAAACAGTAGAGAGGGCTTTGAAAACAGAGCAACTGAAAAGAAAAGGAAGTGGAATGCCTCTGCACGATGGGCTGCTGCAGCCCAATTTGCCCTTGCCTTGAGTTTAACTTCTTCACAGCAAGATCTGCAAGCAATTGCTGAGGGAGGAAATGACAACAACATTCTTCAGGAGACAAGGAATGCAGCTCAGATCCTGCAGGATGTTTTGCAAGGAAAGCATGACAGTGCTATTGAAGAGGCATTAGTCCAGCATCAAGTACCGAGGGAAAATTGGTGGTCTGCACTCTTTAAAGTTGTGGAAGGTTTGGCTGTAATGAGTCGATTGGCACGAAACAGATTTTATCAAGATGAGTCTATAATTGAAGGGAGAGATATTGTGTGGGACGATCTGACTATATGA___TGAATCATCTCTATATTTTTGAATTTCTGTTGAAGCTTCTGATTGAGAATTGATAGGAATCTCGAGATCAATTATTGCCTATTAATATAATTCTTAAATTTCAGCAGTGGATTGTTTTTCCCGTGCGGTAATTAACTCATTTGCAAGTTTATGTATCACAGAAGTTCCAGATGTCATTGTAATGCATTGTGCATTTAAACTCTAGAAATTGGTATTTCCATTCCGTGTGTCAAAGAATGGAATGTTGTAAACAATAGAAGTATATCATAGTCCAAGAGGCCAAATGATTTGAATGGGCAATAGAGAAACATTTATTGAAATGAAAAGAAACCTATTCCGAACCAACTTTTGTGCTGTCCAGTACAAGGTCATTTTCAACATTCACCTTAAATAGAGGATAAGTGTTGCTGATCTTAATGTCTTCTGACTCTTATGTTTTGTTGATTTCTAATTTTCTTATAAAGTA

Fln Alignment:

Contig29048___ISIKNGTFSWDKKAEKATLSNIHLDISVGSLVAVVGSTGEGKTSLISAILGEIPAVSETEVV------------VRGSVAYVPQVSWIFNATVRDNILFG--SPYDPLRYEKAIHVSALEHDLQSLPGGDLTEIGERGVNISGGQKQRVSIARAVYANTDVYIFDDPLSALDA---HVGRQVFEKCLKDELKGKTQVLV-TNQLHFLPHVDRIILIGEGMIKEEGTYEELISRGPLFQKL
D5ABW1_______________IEFVNISFNYPARPMIPVLQNVNLSFFPGELVAVVGLSGSGKSTLLALLLRLYEAVSGQILIDGIPLNELDVKWFRSKIGVVSQEPRLFNMDIASNISYGCVKKVSQRDIEWAAKQADAHEFIMSLPDGYKTLIDN--ARLSGGQKQRIAIARAVLREPTILVLDEATSALDAESENYVKQAIERIVRSNSKRKCTVLVITHRLSTICTADRIVVMKSGRILEMGSHDELLQKDGEYAKL

SNPs (tot: 38)

Position	A %	C %	G %	T %	Probability
471			25	75	0.996473
617	75		25		0.996473
641	20			80	0.995493
658	33			66	0.997452
659	33			66	0.997452
660			66	33	0.997452
1366	14			85	0.993533
1421	16			83	0.994512
1422	16			83	0.994512
1704	12			87	0.992554
1705			87	12	0.992554
1784	12	87			0.992554
1785	12			87	0.992554
1786		87	12		0.992554
1788	12			87	0.992554
1791		12		87	0.992554
1792	12		87		0.992554
1793			12	87	0.992554
1855	12		87		0.992554
1901			83	16	0.994512
1905			83	16	0.994512
1907		83	16		0.994512
1909			83	16	0.994512
2029	75		25		0.996473
2090	83		16		0.994512
2104		83	16		0.994512
2560	33		66		0.997452
3216	25	25			1.0
3217	50			50	1.0
3681	88		11		0.923564
3969		25		75	1.0
4123		10		90	0.90298
4898	90			10	0.90298
5138		91		8	0.999766
5225	10	90			1.0
5283	70		29		1.0
5298	87		12		0.999964
5362		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain