SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene26165

Length: 176 nt

UniGene Fasta

>sp_v3.0_unigene26165
AAGAAAGCTTTCGCCAAATACGCTGCTAAATACAAGGATGGTGCTAAATCCATTGCCCTCCAACTCGCCAGAATCAAGAAATACTGCACTGTTGTCAGAGTCCTTGTCCACACCCAACAACACTTGATGAACTTGAGACAAAAGAAGGCCAATATCGTCGAAATCCAAGTTAACGG

Ace file of the UniGene sp_v3.0_unigene26165

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Ribosomal protein L3 (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7E5_9MOLL	-	-	2.0e-07	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	54%

Source	Gene names
Sma3	GSVIVT00010223001; PHATR_13361; POPTRDRAFT_583524; POPTRDRAFT_831551; RPL3; RPL3-A1; RPL3A-1; RPL3B; VITISV_042376;

Source	GOs	Term	Type	Identity
Sma3	ribosome	GO:0005840	Cellular Component	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L3	IPR000597	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NZI7

Fln msg: Distance to subject end: 201 aas, your sequence is shorter than subject: 58 - 389

Fln protein: KKAFAKYAAKYKDGAKSIALQLARIKKYCTVVRVLVHTQQHLMNLRQKKANIVEIQVN

Protein Length: 59

Fln nts: AAGAAAGCTTTCGCCAAATACGCTGCTAAATACAAGGATGGTGCTAAATCCATTGCCCTCCAACTCGCCAGAATCAAGAAATACTGCACTGTTGTCAGAGTCCTTGTCCACACCCAACAACACTTGATGAACTTGAGACAAAAGAAGGCCAATATCGTCGAAATCCAAGTTAACGG

Fln Alignment:

Contig26165___IALQLARIKKYCTVVRVLVHTQ-QHLMNLRQKKANIVEIQVN
A9NZI7_______________IQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAHLMEIQVN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain