SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene24802

Length: 5359 nt

UniGene Fasta

>sp_v3.0_unigene24802
ATATTTGGCGACTGACCGAGATATCACGCATTTCCTTTTACGAGGGTTTTTCTAGGCGAAGCGCTATACACAGTGATTATATGTCAGGTATGCCCTGCGATTTTCCGAAATCTTCCGAATTTTCGGTAGTATAAAGGAGTACAGGTCTTTGCCATTGCAAATTTAATGTAACAGGAGACCGTCGGGATTTTGCACCGGTGAATATTCAGCCTTTTGAGCTCAATTCAGAATTTTGACAGAAATCAAGACTTGGATCGGATAATGACCATTTGATTATTGTTAAGCCTAATTATATACCAATCAAGATGCATGGACAGTGTTTGCTTCAGTCGGCAATAAGCAGGCTACCGTCTTCTCTGGTGGAAAAACGTCATAGTAGGGAATATCCTGGTCCTACTGCTGGACTTGTTCCCCACAGCATATCTATTGGTATTTCAAATCCATCACTCCGTCGGTCCTCAAAATCTAGTCTTTACAGTAAATTCTTGGACAATGGTCTCCTCTTACCAAACAAAATCTGTTTCAAGGTGACCCCCACTGTGGGCTGGCTTGGGCCTCGTGCAGTTCTGGCAACAGATCTAGCTGCTTCTGAGCAGCTTGTTGAGAAATTCAACCTTGATGGGCAGTCTCAGCTGCAGGTGAATGTTGTTAATTCTACAGCTGGATCTCCAACAACGATTCATTTGCAGGTTACGAATAGCAATCCGTCCTTAATTCTTCATTGGGGTGCTGTTGGTTCTGACAAGAAGAATTGGATTCTTCCATCGCATAGGCCCAATGGAACACAAGATTATAAAAAAAGAGCTTTGCGGACTCCTTTTACAAAGTCTGGGGAAAGCTCTTTCTTGACGATTGAAATTCTTGACACAAACATATCTGCAATTGAATTTACTTTGTATGACCAATCAAGAGAAAAATGGTTTAAGTATGAAGGCCAGAACTTCCGTATTGACTTGCCTAGGGGTGATAGTGGCACACCACAAAAGGGTAATAGTGGCAAACCACAAATATCAATACCTGAGGAGCTTGTTCAAATACAAGCTTATTTACGATGGGAAAGGAGAGGCAAGCAGATTTATACCCCAGAGCAGGAAAAGGAAGAATATGAGGCGGCTCGAAAAGATTTACAAGATGAAGTTGCTAAGGGTCTTTCCCTCCATGACATTAGAGAAAAGCTGCAGGGAGGTGGCAGTCTTGGTGATGGGTCTTTAAGTACGAAGATACCTGATGATCTCATACAAGTTCAGTCATATTTACGCTGGGAGAAAGCTGGCAAACCCAATTACTCTCAAGAAAAGCAACTTCAAGAATTTGAAGAGGCTAGAAAAGACTTGGAAAACAAATTATCAGAGGGAATGTCTCTGGCTGACCTTCGGAAGAAGCTACAATCAGGAGACACTCAAAAGAAAGCTGCAGATAGAATAGGAAAGCCTAAAACCTTTCAACGCATTCAACGGAAAAAACGTGATATACTACAGATGCTTAACAAATTTCCTGATAAGAAGGAAAATATCAAAGTTTCTGTTGAGCCAGAAAAGCGTAGTGCACTTGCGCTGTGCTCACAGGTTATGGAAGCCTTGGATGGTGGGTCAGTTCTTCAAAAGAAGATATTCAAATTTGGGGACAAAGAACTCCTGGTTCTTATAACAAATCCAAGAGGCAAGGTCCATGTAAGGTTGGCTACAGATATGGAAGGACCACTTACACTACACTGGGGCTTGTCAAAACATTCAGCTAGGGAGTGGACGCCACCTCCATTGGACATTTTACCTGAAGGGTCAAATCTTTTGCAATTAGCTTGTGATACACCTTTTAAAGAGGGGTTTGCTGGAGATGCATCATTAAAGTCTGTTGAGATTGAGATTGACAAAAGTAGCTTTCTGGGAATGCCTTTTGTTCTGTCCTCCTCTGGTAACTGGATCAAAGACAATGGGTCAGACTTCTATTTTAGTCTGAGAGAAAAAGATACAAAACCTGTAAAGGCCGTGGGAGATGGCAGAGGTACTGCCAAAGGGTTGTTACATGCAATTGCAGAACAGGAGAGTGAAGCAGAAAGGTCATTAATGCATAGATTCAATATTGCAACAGGGTTGACAAATAGAGCCAAAGATGAAGGGGAGTTGGGCCTGGCTGGAATCCTGGTTTGGATGAGATTCATGGCAACTAGACAGCTTACATGGAATAAAAACTACAATGTGAAACCCCGGGAAATTAGTGCAGCTCAAGACAGGCTTACAGATTTACTGCAACAAATATTTTTAGAGCAGCCACATAATCGGGAAATTACACGACTCATTATGTCAACTGTAGGTCGTGGAGGCCAAGGTGATGTTGGGCAGCGTATCCGAGATGAAATCTTGGTGATCCAGCGGAACAATGACTGTAAGGGTGGAATGATGGAGGAGTGGCACCAAAAGCTACATAATAATACGAGTCCAGATGATGTAGTCATCTGCCAGGCTCTTATTGATTATGCCAAGAGTGATTTCAACATGGATGTGTACTGGAATACATTGATCTCCAATGGTGTAACAAAGGAACGCCTTGGAAGTTATGATCGTAAGATTTGTTCAGAGCCTAGATTCAGGCGTGATCAGAAAGATGGTCTTATTCGTGATTTGACAGCATACCTGAGAACGCTGAAGGCAGTTCACTCTGGCGCAGACCTTGAATCTGCCATTGCAACTTGCATGGGTTACTCTGCAGAGGGACGGGGTTTTATGGGTGGAGTTCAAATTCGCCCTGTTAGTGGTTTGTCATCTGAATTGCCGGGACTTTTAAAGTTTAGTTTGGACCATGTTGAAGATAAACAGGTTGGCCCTCTTCTAGAGGGATTGCTGGAAGCACGATTTGAGCTCCGTTCTAACCTTCTTAAACCACATGATCGACTCAAGGATATCATATTTTTGGATCTTGCTCTTGACTCAACTGTTAGAACTGCTATTGAAAGGGGATTCGAGGAGCTGAATAATGCTCAACCATCGGAAATTATATATTTTATTACCATGGTGCTTGAAAATTTATCCCTATCATCAGATAACAATGAAGAGCTTATATACTGCTTGAAGGATTGGTATCATACACTCGATTTATGCAAGTCTAAATCAGATCAGTGGGCGCTATATGCTAAGGCTGTGCTTGATCGGACAAGACTTGCACTTACCGAGAAGGCTGAGCACTACCAGAAAGTTCTGCAACCAACTGCTGAGTACCTTGGTGGTTTGTTGGGAGTAGATCAGTCAGCACTAAGCATCTTCACGGAAGAAATGATACGGGCTGGCTCAGCTGCCTCTCTATCTTTGCTTCTCAACCGCCTTGATCCTGTTCTTCGAAATATTGCACATCTTGGCAGCTGGCAGGTGATCAGTCCAGTGGAAGTGCGTGGATTTGTTATTACAGTCGATGAATTAGCTAAAGTTCAAAATGAAGTCTATGATCAGAAAACAATCCTAGTCGTAAACAGAGTAAAGGGAGAGGAAGAAATTCCGGATGGTGTAGTTGCTGTTTTGACGCCTGACATGCCTGATGTTTTATCTCATGTGTCAGTGCGGGCAAGGAATAGCAAGGTGTGCTTTGCAACGTGCTTTGATCCAAACATTCTTGATGACCTTCGAGCAAAGGAAGGAAAGGCATTGTTGATACGACCTACTTCATCCGACCTAGTCTATAATGAAATCAAGGTTAATGAAGTTTTGGATGACTCGGAAAATCTATCACAAGGCCATGGAGTATCTCAAGGAATAGCATTAAAGAAAAAAAAAATTCAACGGGAAGTATGCAATCTCAGCTGATGAATTTTCCGATGAACTGGTTGGTGCTAAGTCTCGCAATATTGCTTATTTGAGAGGGAAAGTTCCTTCATGGGTGCGAGTTCCTGTGTCAATTGCCTTACCATTTGGTGTGTTTGAGAAAGTTCTATCAGAAGATATGAACAAGGGTGTTGCTGAAAAAATAGAAGCTCTGGACAAACTTGTAGCCAAAGGAGACTTTAGCAAACTCCACAAAATTCGAGAAATTGTTCTGCAAATGAATGCACCTTCCCAATTGGTGGGTGAACTGAAAGATAAGATGCAGAGAGCAAATATGCCTTGGCCTGGTGAGGAGGGTGAAGAGCGATGGTTACAGGCTTGGATGGCGATTAAAAGGGTTTGGGCTTCGAAGTGGAATGAAAGAGCGTATTTTAGTACACGAAAGGCAAAAATAGATCATAGTGACCTTTGTATGGCTGTTTTGGTTCAAGAAATAATCAGTGCAGACTATGCATTTGTCATTCATACTACTAACCCATCAACAGGAGACTCATCTGAGATTTACGCCGAGATTGTAAAAGGTTTGGGAGAAACACTAGTTGGGGCCTACCCTGGTCGAGCTATGAGTTTCGTTACTAAGAAGACAGACTTAAATCAAGTCAAGGTATTGGGCTACCCCAGCAAACCGATAGGACTATTCATCAGACAGTCTATTATCTTCAGATCTGATTCAAATGGTGAAGATCTAGAGGGTTATGCAGGTGCTGGTCTTTATGACAGTGTTCCCATGGATGAAGAGGAGAAAAGAACAATTGATTATTCCTCAGATTCACTTGTCGTGGATCACAATTTTAGGCAGTCCATACTATCAAAGATTGCTCAAGTTGGACATGCAGTCGAGGAACTTTATGGATCTCCCCAGGATGTTGAAGGTGTAGTAAAAGATGGTGAAATCTATGTTGTGCAGACCAGGCCTCAAATGTAAAGGATGCATCCGAGGAATAAAAATATCCATTAATGAGAAATATAACATGTAGTCTTAGAATGCCCACCCTTTTTCTCTTCAGGTATTTATTAACTCAGAAGCTTGGTGTCTGGGATGCTTTCTGCTATAGCAGAGCTTGCAGTTTATTAGAGTGGCAGTCGTTTTCATCGCTGCAGAGGCATTGTATGGCAAACTGTCCACTTTATATTTGTGCCAGCTTTGGGCATCGGGCCCTTCAAGATTACTCCTGGAGCATATTCATGTTAGTGATATGTATAGGTTGTGGGGCATACCACTGAAGTGGTTAGCTTGTTCTGAAGCTTGGAACTTACTGTGCATTTCAAGCAGGGAAAATATTCCTTATCGTTATATCTAGACAGAGAGGGATGGACAGAGAAAGGAATTGCAATTAAAGGGTGGTATTGAATAAATCAACATTGGCTAGTTGCAGCAATCAATAATTTTTCAAATATTATAGAATTTTATCACATGAAGAGGATAACAATGGCGTTTGACTTTTTCCTTGTTTCAGCTATTCTCATAAATATGGACTTCATAATGTTTGGAAAAAAAAATGTTGCGAATATTACCACGTAAGTTCAAACGCAAAAATATTATTGTTGCG

Ace file of the UniGene sp_v3.0_unigene24802

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Alpha-glucan water dikinase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPI3_RICCO	-	-	0.0	59%
FL-Next	sp=Alpha-glucan water dikinase, chloroplastic; Citrus reticulata (Tangerine).	-	-	0.0	59%
Sma3	Glucan water dikinase	-	-	7.149e-09	-

Source	ECs	Term	Type	e value	Identity
Sma3	Alpha-glucan, water dikinase.	EC:2.7.9.4	-	2.862e-23	-

Source	Gene names
Sma3	At1g10760; At4g24450; GSVIVT00002766001; GSVIVT00002767001; GWD; GWD1; GWD2; MICPUCDRAFT_48104; MICPUN_96442; OSTLU_89893; Os06g0498400; OsI_23085; OsJ_21446; PHYPADRAFT_129189; PHYPADRAFT_174645; POPTRDRAFT_1089922; POPTRDRAFT_851165; R1; R1-1; RCOM_0024

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	chloroplast stroma	GO:0009570	Cellular Component	-
Sma3	chloroplast envelope	GO:0009941	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	enzyme inhibitor activity	GO:0004857	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	kinase activity	GO:0016301	Molecular Function	-
Sma3	pectinesterase activity	GO:0030599	Molecular Function	-
Sma3	alpha-glucan, water dikinase activity	GO:0050521	Molecular Function	-
Sma3	carbohydrate metabolic process	GO:0005975	Biological Process	-
Sma3	phosphorylation	GO:0016310	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	PEP-utilising enzyme, C-terminal	IPR000121	-	-
Sma3	Pyruvate phosphate dikinase, PEP/pyruvate-binding	IPR002192	-	-
Sma3	Pectinesterase inhibitor	IPR006501	-	-
Sma3	ATP-grasp fold, subdomain 1	IPR013815	-	-
Sma3	ATP-grasp fold, subdomain 2	IPR013816	-	-
Sma3	PEP-utilising enzyme, active site	IPR018274	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G10760.1	SEX1, SOP1, SOP, GWD1, GWD Pyruvate phosphate dikinase, PEP/pyruvate binding domain chr1:3581210-3590043 REVERSE LENGTH=1399	56%
RefSeq	Arabidopsis thaliana	NP_563877.1	alpha-glucan water dikinase 1 [Arabidopsis thaliana]	56%
RefSeq	Populus trichocarpa	XP_002315679.1	predicted protein [Populus trichocarpa]	61%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q8LPT9

Fln msg: Overlapping hits, possible frame ERROR between 3761 and 3754,

Fln protein: MHGQCLLQSAISRLPSSLVEKRHSREYPGPTAGLVPHSISIGISNPSLRRSSKSSLYSKFLDNGLLLPNKICFKVTPTVGWLGPRAVLATDLAASEQLVEKFNLDGQSQLQVNVVNSTAGSPTTIHLQVTNSNPSLILHWGAVGSDKKNWILPSHRPNGTQDYKKRALRTPFTKSGESSFLTIEILDTNISAIEFTLYDQSREKWFKYEGQNFRIDLPRGDSGTPQKGNSGKPQISIPEELVQIQAYLRWERRGKQIYTPEQEKEEYEAARKDLQDEVAKGLSLHDIREKLQGGGSLGDGSLSTKIPDDLIQVQSYLRWEKAGKPNYSQEKQLQEFEEARKDLENKLSEGMSLADLRKKLQSGDTQKKAADRIGKPKTFQRIQRKKRDILQMLNKFPDKKENIKVSVEPEKRSALALCSQVMEALDGGSVLQKKIFKFGDKELLVLITNPRGKVHVRLATDMEGPLTLHWGLSKHSAREWTPPPLDILPEGSNLLQLACDTPFKEGFAGDASLKSVEIEIDKSSFLGMPFVLSSSGNWIKDNGSDFYFSLREKDTKPVKAVGDGRGTAKGLLHAIAEQESEAERSLMHRFNIATGLTNRAKDEGELGLAGILVWMRFMATRQLTWNKNYNVKPREISAAQDRLTDLLQQIFLEQPHNREITRLIMSTVGRGGQGDVGQRIRDEILVIQRNNDCKGGMMEEWHQKLHNNTSPDDVVICQALIDYAKSDFNMDVYWNTLISNGVTKERLGSYDRKICSEPRFRRDQKDGLIRDLTAYLRTLKAVHSGADLESAIATCMGYSAEGRGFMGGVQIRPVSGLSSELPGLLKFSLDHVEDKQVGPLLEGLLEARFELRSNLLKPHDRLKDIIFLDLALDSTVRTAIERGFEELNNAQPSEIIYFITMVLENLSLSSDNNEELIYCLKDWYHTLDLCKSKSDQWALYAKAVLDRTRLALTEKAEHYQKVLQPTAEYLGGLLGVDQSALSIFTEEMIRAGSAASLSLLLNRLDPVLRNIAHLGSWQVISPVEVRGFVITVDELAKVQNEVYDQKTILVVNRVKGEEEIPDGVVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPNILDDLRAKEGKALLIRPTSSDLVYNEIKVNEVLDDSENLSQGHGVSQGIALKxxxxFNGKYAISADEFSDELVGAKSRNIAYLRGKVPSWVRVPVSIALPFGVFEKVLSEDMNKGVAEKIEALDKLVAKGDFSKLHKIREIVLQMNAPSQLVGELKDKMQRANMPWPGEEGEERWLQAWMAIKRVWASKWNERAYFSTRKAKIDHSDLCMAVLVQEIISADYAFVIHTTNPSTGDSSEIYAEIVKGLGETLVGAYPGRAMSFVTKKTDLNQVKVLGYPSKPIGLFIRQSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKRTIDYSSDSLVVDHNFRQSILSKIAQVGHAVEELYGSPQDVEGVVKDGEIYVVQTRPQM*

Protein Length: 1478

Fln nts: ATATTTGGCGACTGACCGAGATATCACGCATTTCCTTTTACGAGGGTTTTTCTAGGCGAAGCGCTATACACAGTGATTATATGTCAGGTATGCCCTGCGATTTTCCGAAATCTTCCGAATTTTCGGTAGTATAAAGGAGTACAGGTCTTTGCCATTGCAAATTTAATGTAACAGGAGACCGTCGGGATTTTGCACCGGTGAATATTCAGCCTTTTGAGCTCAATTCAGAATTTTGACAGAAATCAAGACTTGGATCGGATAATGACCATTTGATTATTGTTAAGCCTAATTATATACCAATCAAG_-_ATGCATGGACAGTGTTTGCTTCAGTCGGCAATAAGCAGGCTACCGTCTTCTCTGGTGGAAAAACGTCATAGTAGGGAATATCCTGGTCCTACTGCTGGACTTGTTCCCCACAGCATATCTATTGGTATTTCAAATCCATCACTCCGTCGGTCCTCAAAATCTAGTCTTTACAGTAAATTCTTGGACAATGGTCTCCTCTTACCAAACAAAATCTGTTTCAAGGTGACCCCCACTGTGGGCTGGCTTGGGCCTCGTGCAGTTCTGGCAACAGATCTAGCTGCTTCTGAGCAGCTTGTTGAGAAATTCAACCTTGATGGGCAGTCTCAGCTGCAGGTGAATGTTGTTAATTCTACAGCTGGATCTCCAACAACGATTCATTTGCAGGTTACGAATAGCAATCCGTCCTTAATTCTTCATTGGGGTGCTGTTGGTTCTGACAAGAAGAATTGGATTCTTCCATCGCATAGGCCCAATGGAACACAAGATTATAAAAAAAGAGCTTTGCGGACTCCTTTTACAAAGTCTGGGGAAAGCTCTTTCTTGACGATTGAAATTCTTGACACAAACATATCTGCAATTGAATTTACTTTGTATGACCAATCAAGAGAAAAATGGTTTAAGTATGAAGGCCAGAACTTCCGTATTGACTTGCCTAGGGGTGATAGTGGCACACCACAAAAGGGTAATAGTGGCAAACCACAAATATCAATACCTGAGGAGCTTGTTCAAATACAAGCTTATTTACGATGGGAAAGGAGAGGCAAGCAGATTTATACCCCAGAGCAGGAAAAGGAAGAATATGAGGCGGCTCGAAAAGATTTACAAGATGAAGTTGCTAAGGGTCTTTCCCTCCATGACATTAGAGAAAAGCTGCAGGGAGGTGGCAGTCTTGGTGATGGGTCTTTAAGTACGAAGATACCTGATGATCTCATACAAGTTCAGTCATATTTACGCTGGGAGAAAGCTGGCAAACCCAATTACTCTCAAGAAAAGCAACTTCAAGAATTTGAAGAGGCTAGAAAAGACTTGGAAAACAAATTATCAGAGGGAATGTCTCTGGCTGACCTTCGGAAGAAGCTACAATCAGGAGACACTCAAAAGAAAGCTGCAGATAGAATAGGAAAGCCTAAAACCTTTCAACGCATTCAACGGAAAAAACGTGATATACTACAGATGCTTAACAAATTTCCTGATAAGAAGGAAAATATCAAAGTTTCTGTTGAGCCAGAAAAGCGTAGTGCACTTGCGCTGTGCTCACAGGTTATGGAAGCCTTGGATGGTGGGTCAGTTCTTCAAAAGAAGATATTCAAATTTGGGGACAAAGAACTCCTGGTTCTTATAACAAATCCAAGAGGCAAGGTCCATGTAAGGTTGGCTACAGATATGGAAGGACCACTTACACTACACTGGGGCTTGTCAAAACATTCAGCTAGGGAGTGGACGCCACCTCCATTGGACATTTTACCTGAAGGGTCAAATCTTTTGCAATTAGCTTGTGATACACCTTTTAAAGAGGGGTTTGCTGGAGATGCATCATTAAAGTCTGTTGAGATTGAGATTGACAAAAGTAGCTTTCTGGGAATGCCTTTTGTTCTGTCCTCCTCTGGTAACTGGATCAAAGACAATGGGTCAGACTTCTATTTTAGTCTGAGAGAAAAAGATACAAAACCTGTAAAGGCCGTGGGAGATGGCAGAGGTACTGCCAAAGGGTTGTTACATGCAATTGCAGAACAGGAGAGTGAAGCAGAAAGGTCATTAATGCATAGATTCAATATTGCAACAGGGTTGACAAATAGAGCCAAAGATGAAGGGGAGTTGGGCCTGGCTGGAATCCTGGTTTGGATGAGATTCATGGCAACTAGACAGCTTACATGGAATAAAAACTACAATGTGAAACCCCGGGAAATTAGTGCAGCTCAAGACAGGCTTACAGATTTACTGCAACAAATATTTTTAGAGCAGCCACATAATCGGGAAATTACACGACTCATTATGTCAACTGTAGGTCGTGGAGGCCAAGGTGATGTTGGGCAGCGTATCCGAGATGAAATCTTGGTGATCCAGCGGAACAATGACTGTAAGGGTGGAATGATGGAGGAGTGGCACCAAAAGCTACATAATAATACGAGTCCAGATGATGTAGTCATCTGCCAGGCTCTTATTGATTATGCCAAGAGTGATTTCAACATGGATGTGTACTGGAATACATTGATCTCCAATGGTGTAACAAAGGAACGCCTTGGAAGTTATGATCGTAAGATTTGTTCAGAGCCTAGATTCAGGCGTGATCAGAAAGATGGTCTTATTCGTGATTTGACAGCATACCTGAGAACGCTGAAGGCAGTTCACTCTGGCGCAGACCTTGAATCTGCCATTGCAACTTGCATGGGTTACTCTGCAGAGGGACGGGGTTTTATGGGTGGAGTTCAAATTCGCCCTGTTAGTGGTTTGTCATCTGAATTGCCGGGACTTTTAAAGTTTAGTTTGGACCATGTTGAAGATAAACAGGTTGGCCCTCTTCTAGAGGGATTGCTGGAAGCACGATTTGAGCTCCGTTCTAACCTTCTTAAACCACATGATCGACTCAAGGATATCATATTTTTGGATCTTGCTCTTGACTCAACTGTTAGAACTGCTATTGAAAGGGGATTCGAGGAGCTGAATAATGCTCAACCATCGGAAATTATATATTTTATTACCATGGTGCTTGAAAATTTATCCCTATCATCAGATAACAATGAAGAGCTTATATACTGCTTGAAGGATTGGTATCATACACTCGATTTATGCAAGTCTAAATCAGATCAGTGGGCGCTATATGCTAAGGCTGTGCTTGATCGGACAAGACTTGCACTTACCGAGAAGGCTGAGCACTACCAGAAAGTTCTGCAACCAACTGCTGAGTACCTTGGTGGTTTGTTGGGAGTAGATCAGTCAGCACTAAGCATCTTCACGGAAGAAATGATACGGGCTGGCTCAGCTGCCTCTCTATCTTTGCTTCTCAACCGCCTTGATCCTGTTCTTCGAAATATTGCACATCTTGGCAGCTGGCAGGTGATCAGTCCAGTGGAAGTGCGTGGATTTGTTATTACAGTCGATGAATTAGCTAAAGTTCAAAATGAAGTCTATGATCAGAAAACAATCCTAGTCGTAAACAGAGTAAAGGGAGAGGAAGAAATTCCGGATGGTGTAGTTGCTGTTTTGACGCCTGACATGCCTGATGTTTTATCTCATGTGTCAGTGCGGGCAAGGAATAGCAAGGTGTGCTTTGCAACGTGCTTTGATCCAAACATTCTTGATGACCTTCGAGCAAAGGAAGGAAAGGCATTGTTGATACGACCTACTTCATCCGACCTAGTCTATAATGAAATCAAGGTTAATGAAGTTTTGGATGACTCGGAAAATCTATCACAAGGCCATGGAGTATCTCAAGGAATAGCATTAAAGxxxxxxxxxxxxTTCAACGGGAAGTATGCAATCTCAGCTGATGAATTTTCCGATGAACTGGTTGGTGCTAAGTCTCGCAATATTGCTTATTTGAGAGGGAAAGTTCCTTCATGGGTGCGAGTTCCTGTGTCAATTGCCTTACCATTTGGTGTGTTTGAGAAAGTTCTATCAGAAGATATGAACAAGGGTGTTGCTGAAAAAATAGAAGCTCTGGACAAACTTGTAGCCAAAGGAGACTTTAGCAAACTCCACAAAATTCGAGAAATTGTTCTGCAAATGAATGCACCTTCCCAATTGGTGGGTGAACTGAAAGATAAGATGCAGAGAGCAAATATGCCTTGGCCTGGTGAGGAGGGTGAAGAGCGATGGTTACAGGCTTGGATGGCGATTAAAAGGGTTTGGGCTTCGAAGTGGAATGAAAGAGCGTATTTTAGTACACGAAAGGCAAAAATAGATCATAGTGACCTTTGTATGGCTGTTTTGGTTCAAGAAATAATCAGTGCAGACTATGCATTTGTCATTCATACTACTAACCCATCAACAGGAGACTCATCTGAGATTTACGCCGAGATTGTAAAAGGTTTGGGAGAAACACTAGTTGGGGCCTACCCTGGTCGAGCTATGAGTTTCGTTACTAAGAAGACAGACTTAAATCAAGTCAAGGTATTGGGCTACCCCAGCAAACCGATAGGACTATTCATCAGACAGTCTATTATCTTCAGATCTGATTCAAATGGTGAAGATCTAGAGGGTTATGCAGGTGCTGGTCTTTATGACAGTGTTCCCATGGATGAAGAGGAGAAAAGAACAATTGATTATTCCTCAGATTCACTTGTCGTGGATCACAATTTTAGGCAGTCCATACTATCAAAGATTGCTCAAGTTGGACATGCAGTCGAGGAACTTTATGGATCTCCCCAGGATGTTGAAGGTGTAGTAAAAGATGGTGAAATCTATGTTGTGCAGACCAGGCCTCAAATGTAA___AGGATGCATCCGAGGAATAAAAATATCCATTAATGAGAAATATAACATGTAGTCTTAGAATGCCCACCCTTTTTCTCTTCAGGTATTTATTAACTCAGAAGCTTGGTGTCTGGGATGCTTTCTGCTATAGCAGAGCTTGCAGTTTATTAGAGTGGCAGTCGTTTTCATCGCTGCAGAGGCATTGTATGGCAAACTGTCCACTTTATATTTGTGCCAGCTTTGGGCATCGGGCCCTTCAAGATTACTCCTGGAGCATATTCATGTTAGTGATATGTATAGGTTGTGGGGCATACCACTGAAGTGGTTAGCTTGTTCTGAAGCTTGGAACTTACTGTGCATTTCAAGCAGGGAAAATATTCCTTATCGTTATATCTAGACAGAGAGGGATGGACAGAGAAAGGAATTGCAATTAAAGGGTGGTATTGAATAAATCAACATTGGCTAGTTGCAGCAATCAATAATTTTTCAAATATTATAGAATTTTATCACATGAAGAGGATAACAATGGCGTTTGACTTTTTCCTTGTTTCAGCTATTCTCATAAATATGGACTTCATAATGTTTGGAAAAAAAAATGTTGCGAATATTACCACGTAAGTTCAAACGCAAAAATATTATTGTTGCG

Fln Alignment:

Contig24802___PRAVLATDLAASEQLVEKFNLDGQSQLQVNVVNSTAGSPTTIHLQVTNSNPSLILHWGAVGSDKKNWILPSHRPNGTQDYKKRALRTPFTKSGESSFLTIEILDTNISAIEFTLYDQSREKWFKYEGQNFRIDLPRGDSGTPQKGNSGKPQISIPEELVQIQAYLRWERRGKQIYTPEQEKEEYEAARKDLQDEVAKGLSLHDIREKXXXXXXXXXXXXXTK------IPDDLIQVQSYLRWEKAGKPNYSQEKQLQEFEEARKDLENKLSEGMSLADLRKKLQSGDTQKKAADRIGKPKTF--QRIQRKKRDILQMLNKF---PDKKENIKVSVEPEKRSALALCSQVMEALDGGSVLQKKIFKFGDKELLVLITNPRGKVHVRLATDMEGPLTLHWGLSKHSAREWTPPPLDILPEGSNLLQLACDTPFKEGFAGDA--SLKSVEIEIDKSSFLGMPFVLSSSGNWIKDNGSDFYFSLREKDTKPVKAVGDGRGTAKGLLHAIAEQESEAERSLMHRFNIATGLTNRAKDEGELGLAGILVWMRFMATRQLTWNKNYNVKPREISAAQDRLTDLLQQIFLEQPHNREITRLIMSTXXXXXXXXXXXXXXXEILVIQRNNDCKGGMMEEWHQKLHNNTSPDDVVICQALIDYAKSDFNMDVYWNTLISNGVTKERLGSYDRKICSEPRFRRDQKDGLIRDLTAYLRTLKAVHSGADLESAIATCMGYSAEGRGFMGGVQIRPVSGLSSELPGLLKFSLDHVEDKQVGPLLEGLLEARFELRSNLLKPHDRLKDIIFLDLALDSTVRTAIERGFEELNNAQPSEIIYFITMVLENLSLSSDNNEELIYCLKDWYHTLDLCKSKSDQWALYAKAVLDRTRLALTEKAEHYQKVLQPTAEYLGGLLGVDQSALSIFTEEMIXXXXXXXXXXXXXXXXXXXXNIAHLGSWQVISPVEVRGFVITVDELAKVQNEVYDQKTILVVNRVKGEEEIPDGVVAVLTPDMPDVLSHVSVRARNSKVCFATCFDPNILDDLRAKEGKALLIRPTSSDLVYNEIKVNEVLDDSE-NLSQGHGVSQGIALKxxxFNGKYAISADEFSDELVGAKSRNIAYLRGKVPSWVRVPVSIALPFGVFEKVLSEDMNKGVAEKIEALDKLVAKGDFSKLHKIREIVLQMNAPSQLVGELKDKMQRANMPWPGEEGEERWLQAWMAIKRVWASKWNERAYFSTRKAKIDHSDLCMAVLVQEIISADYAFVIHTTNPSTGDSSEIYAEIVKGLGETLVGAYPGRAMSFVTKKTDLNQVKVLGYPSKPIGLFIRQSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEEKRTIDYSSDSLVVDHNFRQSILSKIAQVGHAVEELYGSPQDVEGVVKDGEIYVVQTRPQM
Q8LPT9_______________PRAVLAVDSAS--ELAGKFNLEGNVELQITVGAPTPGSLTQVNIEISYSSNSLLLHWGAIRDKKEKWVLPSRPPDGTKILKNRALRTPFVSSGSKSLVKLEIDDPAIEAVEFLILDEAQNKWFKNNGANFHVKLP--------SERSLIQNVSVPEDLVQTQAYLRWERKGKQIYTPEQEKEEYEAARTELLEEIVRGTSVEDLRAKLTNKNDRQEIKESSSHGTKNAIPDDLVQIQSYIRWERAGKPNYSADQQLREFEEARKELQSELEKGISLDEIWKKITKGEIQTKVSDQLKTKKYFRTERIQRKQRDFMQILNKHVAEPTEKKNI--SVEPKALTPVELFVGATEEQEGDSILNKKIYKLAGKELLVLVHKPGGKTKIHLATDGKEPLILHWALSK-KAGEWLAPPPSVLPAGSVLLSGSVETTFTTSSLADLPYQVQSIEIEIEEEGYVGMPSVLQSGGNWIKNKGSDFYVDFSYESKQVQQDFGDGKGTAKALLEKIAGLEIEAQKSFMHRFNIAADLIQEAKEAGELGFAGILVWMRFMATRQLIWNKNYNVKPREISKAQDRLTDLLQNVYISNPEYREIVRMILSTVGRGGEGDVGQRIRDEILVIQRNNNCKGGMMEEWHQKLHNNTSPDDVIICQALIDYIKSDFDISAYWKTLNDNGITKERLLSYDRAIHSEPNFRRDQKDGLLRDLGNYMRTLKAVHSGADLESAITNCLGYRSEGQGFMVGVQINPIPNLPSGFPELLQFVSEHVEDRNVEALLEGLLEARQEIRPLLCKHNDRLKDLLFLDIALESSVRTAIEKGYEELNEAGPEKIMYFVSLILENLALSLDDNEDLIYCLKGWSNALSMSKSKSDNWALFAKSVLDRTRLALAGKADWYQKVLQPSAEYLGTLLSVDKWAVDIFTEEMIRAGSAAALSLLLNRLDPVLRKTASLGSWQVISPVEVFGYVAVVDELLAVQDKSYDQPTILLARRVKGEEEIPHGTVAVLTADMPDVLSHVSVRARNCKVCFATCFDPNILADLQSNEGKMLHLKPTSADIAYSVVEGSELQDSSSANLKEEDGPSSSVALVxxxFAGRYAITSDEFTGELVGAKSRNIAYLKGKVPSWIGIPTSVALPFGVFEKVLSDDINQAVAEKLQILKQKLGEEDHSALREIRETVLQMKAPNQLVQELKTEMKSSGMPWPGDEGEQRWEQAWMAIKKVWASKWNERAFFSTRRVKLDHEYLCMAVLVQEIINADYAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFVCKKNDLKSPRVLGYPSKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDHLITDGHFQQSILSSIARAGCEIEELFGSAQDIEGVVRDGKIYVVQTRPQM

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
1839	85			14	0.993533
1865			85	14	0.993533
1866	85	14			0.993533
1869	85	14			0.993533
2884		66	33		0.997452
2885	66			33	0.997452
2887	66		33		0.997452
2892		66		33	0.997452
2894	66		33		0.997452
2897		66	33		0.997452
2898	66			33	0.997452
2899	66	33			0.997452
2900	33		66		0.997452
2901		33	66		0.997452
2902	66			33	0.997452
2903		33		66	0.997452
3030	20			80	0.995493
3031		80		20	0.995493
3078			16	83	0.994512
3638	72		27		1.0
4862		94		5	0.998397
4915	95		4		0.997218
5138	83		16		0.999991
5265		20		80	0.995493
5278		60		40	1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain