SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene23166

Length: 543 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene23166 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	60S ribosomal protein L24 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SC69_VERA1	-	-	8.0e-28	57%
FL-Next	tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley).	-	-	0.0	49%

Source	GOs	Term	Type	Identity
Sma3	ribosome	GO:0005840	Cellular Component	-
Sma3	structural constituent of ribosome	GO:0003735	Molecular Function	-
Sma3	translation	GO:0006412	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L24e-related	IPR000988	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
120	85		14		0.993533
283		28		71	1.0
389		66		33	1.0
413	33		66		1.0
446			60	40	1.0
458		40	20	40	1.0
503	50		50		1.0
530			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain