SustainPineDB

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Assembly info
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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene21836

Length: 512 nt

UniGene Fasta

>sp_v3.0_unigene21836
ATCGACCAGTCGGAGGCCGAGAAGCAGCGCAAGGTGCTGCTCGAGCTCCAGGCTGAGAGCGCTGCTGTCGAGTCGACCGGTCAGGCTACCGCCGAGGCGAAGGCCAAGGCCAACGCCGCCGAGATCGAGGCCAACGCTGCTGTGACCCAGGCCAAGCTCGTCGCTGAGGCCACCAAGATCAAGACTGAGTCCGAACTCGCGAATAAGATCGCCGTCCAGGCCTCGGAGATCAAGCACCTTCAGGAGCTCAACGGCCTCGAGGTCAACAAGGCCAAGCAGCTCGCCGCCATCGAGTCCAAGAAGTTCAAGGACACCGTCAACGCCATTGGCGCGGACACCATCGCCGCCATTGCCCAGGCTGGTCCCGAGATGCAGGCTCGCCTGCTCCAGGGCCTGGGCCTCCAGGGCTTCCTGATCACCGACGGCAACTCGCCCATCAACCTCTTCAACGCTGCCTCTGGCCTCATTGGCAACTGAAGGCTTGTATCCTCGCCCTCGTGAATACAAGGTTG

Ace file of the UniGene sp_v3.0_unigene21836

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Major vault protein n=1 Tax=Dictyostelium fasciculatum RepID=F4QCU0_9MYCE	-	-	2.0e-30	47%
FL-Next	tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley).	-	-	0.0	57%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: F2E078

Fln msg: your sequence is shorter than subject: 159 - 843

Fln protein: IDQSEAEKQRKVLLELQAESAAVESTGQATAEAKAKANAAEIEANAAVTQAKLVAEATKIKTESELANKIAVQASEIKHLQELNGLEVNKAKQLAAIESKKFKDTVNAIGADTIAAIAQAGPEMQARLLQGLGLQGFLITDGNSPINLFNAASGLIGN*

Protein Length: 160

Fln nts: ATCGACCAGTCGGAGGCCGAGAAGCAGCGCAAGGTGCTGCTCGAGCTCCAGGCTGAGAGCGCTGCTGTCGAGTCGACCGGTCAGGCTACCGCCGAGGCGAAGGCCAAGGCCAACGCCGCCGAGATCGAGGCCAACGCTGCTGTGACCCAGGCCAAGCTCGTCGCTGAGGCCACCAAGATCAAGACTGAGTCCGAACTCGCGAATAAGATCGCCGTCCAGGCCTCGGAGATCAAGCACCTTCAGGAGCTCAACGGCCTCGAGGTCAACAAGGCCAAGCAGCTCGCCGCCATCGAGTCCAAGAAGTTCAAGGACACCGTCAACGCCATTGGCGCGGACACCATCGCCGCCATTGCCCAGGCTGGTCCCGAGATGCAGGCTCGCCTGCTCCAGGGCCTGGGCCTCCAGGGCTTCCTGATCACCGACGGCAACTCGCCCATCAACCTCTTCAACGCTGCCTCTGGCCTCATTGGCAACTGA___AGGCTTGTATCCTCGCCCTCGTGAATACAAGGTTG

Fln Alignment:

Contig21836___DQSEAEKQRKVLLELQAESAAVESTGXXXXXXXXXXXXXXXXXXXXXXXXKLVAEATKIKTESELANKIAVQASEIKHLQELNGLEVNKAKQLAAIESKKFKDTVNAIGADTIAAIAQAGPEMQARXXXXXXXXXXXITDGNSPINLFNAASGLIG
F2E078_______________DEAKAEVERVELLKLQAKTISVEATGQATADAVAKSDAALIVGKSELDQSRLRTDATRIKMQAELEQLQKRQKAEIDHRTQLNELELQKAEELAEIEAQKFKQIVDSIGADTIKAIAQAGPEMQAKLLQGLGLKGFMITDGNSPINLFGAAQGFVG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain