SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene21631

Length: 2035 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v3.0_unigene21631
GGAGAGGGTAATATACAAACTGACAACAAGGTCTTCTCTGATTGCCTCAAGGATAATGATGCTCAACCAGCTCGCGTTCATCAGGGAGCTCTTCAGTTGTTCCTGCATATTATGGAGAACACAGATTTCCAAACAAAGATGCAGGTTTATACGGACTCAAAACAAAGGAAGCTGAAACCCATTATATTTGTGGGTCATTCCTTAGGAGGGGCAGTTGCAACTTTGGCTACACTATGGGTACTGGAAAAGAGGCTTAGGCAAAGTTCTCCTTTTTGTATAACATTTGGAAGTCCTTTAGTGGGGGATGTAGGACTTGTTGAAGCAGTTGGCCGTGAAAATTGGGCAGGCTAACTTTTGTCATGTGGTTTCCAAGCATGATATTGTTCCTCGAATGCTCCTTGCAACTTTTGAGTCAATCGCTGAACCCTTGATTGCTATCCTGCCCTACTGGCAAGGCATAATGACTAATGACAGTAAAACTGTACCTGATTCTTCTATTCAAGATGCTTGTAAGACTCTTCTTAAGAATGTACTGCAGGATACTCATATAGTAACAAAGTATGGGCCCGACTCTCTGAGGGAGTCAGATGGAGCTATCAAGAGAAGCCCATACAAACCTTTTGGCACTTATATGTTTTGTTCAGTCGAGGGTGCAGCTTGTATTGATAATTCTGAGACCGTTTTGAAGATTCTTCATTTGACAATGCAGAGCCACGAAAAGCCTTATGATAATATCGTACAGGACTGTTTTAAAGAGCATGTAGAGTATGGTTCTGTTTTGAAACATGTCATACAGAAGTCCATCAGTGGGAAAAGAAGTGCAAAGTGTGATTCAGAATCTTCTTACAAGATGGGTATTTCACTGCAGCTGGAGGCCATTGGTATCGGTGCTCAGGATGATCATGCACAGATTGCCCTACAAATAGCAAGAAATATGGAAAACAGGCATAGCTCAAATGTTGCTAAGCTAGCAATTGAATTAAGCGAGAAACAATGTATTATGGCAGAGATTGAGTGGTATAAAGAGCGTTGTGAAAAGGAAGATGGCATCACATATTATGATTCTTTTAGGAAACACAACCATATCGATGCTAATTTATGCAGGGAAAGTCTCGCCAAGTTTTGGGATGATATTATTAAAATGTGGGAAAATCATGAGTTGCCCCATGATTTCCAATCTCAAAATAAGTGGATAAACGCTGGCACTGCTTATAGAAGACTTGTGGAGCCTCTGGATATTGCACATTATTATGGCATGTCTAATGGTAAAGGCAACTATCTTTCAGATGGAAGACCTACTCGTCATAAAGTTCTTGAGAAATGGATGGAAGAGAAAGAAAAAACTCGCAGTTCAAAAGGTAGGAGCGGGCGTACCGAGCTTGCATCCCTCACTCAGGACTCCTGCTTTTGGGCACATGTAGAAGAGGCTTTGAAAGAGTTGAAAAATCTGGAGCAGAGCCAACACCAAAAGCTGGAAAGCCTTGAAATATTTGAAGGTTATGTGGCAAGATTGATCAATGATCGCAACATTTCCTTTGATGTTTTCTTGCAAGGGAGCAGCTTCATGGAATGGTGGAAAGAATGGAAAAAATCCAAGCAAGATCAATTCACCGAATCGAGCTCTCCTTTGTATGAAATAATGGAAACAGAAAGCTGGAAGGAAGGGCTGAACTTGTAGATGGCTGCGTGGACATTGGAAAACTGTTTCAATTAGAGAAGTTTGTTTTCTCAGATGTCATTTCCCTTAGAGAAGGTTGTTTCAATTAGAGAAGGTTGTTTTCTCAGATGTAACTTCCTCGTTCCACTTAGGTTTCGTGTCTTTAGTTAGTGACTTCTTAATTTCCATGTTCTATTTTGGTTTCGTGTCTTTAGGTTGTGATTTTCTTTCATTTGTTTAAATTAGCGTGATCAATTAGGGAACTTGTTCAAGTAGGTTTTTTGCTTTTAAGATGTAATTTCTTCGTTTTAATTAGGTTCTGTGTTTTTAAGAAAGAGAGTTAAGATATTCCACAATAGTATGTGAATTTTATGGATG

Ace file of the UniGene sp_v3.0_unigene21631 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam01764, Lipase_3, Lipase (class 3)	-	-	3.0e-13	34%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Sma3	Putative uncharacterized protein	-	-	3.151e-07	-

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLY7

Fln msg: Separated hits, possible frame ERROR between 348 and 350, your sequence is shorter than subject: 560 - 617

Fln protein: GEGNIQTDNKVFSDCLKDNDAQPARVHQGALQLFLHIMENTDFQTKMQVYTDSKQRKLKPIIFVGHSLGGAVATLATLWVLEKRLRQSSPFCITFGSPLVGDVGLVEAVGRENWAxxNFCHVVSKHDIVPRMLLATFESIAEPLIAILPYWQGIMTNDSKTVPDSSIQDACKTLLKNVLQDTHIVTKYGPDSLRESDGAIKRSPYKPFGTYMFCSVEGAACIDNSETVLKILHLTMQSHEKPYDNIVQDCFKEHVEYGSVLKHVIQKSISGKRSAKCDSESSYKMGISLQLEAIGIGAQDDHAQIALQIARNMENRHSSNVAKLAIELSEKQCIMAEIEWYKERCEKEDGITYYDSFRKHNHIDANLCRESLAKFWDDIIKMWENHELPHDFQSQNKWINAGTAYRRLVEPLDIAHYYGMSNGKGNYLSDGRPTRHKVLEKWMEEKEKTRSSKGRSGRTELASLTQDSCFWAHVEEALKELKNLEQSQHQKLESLEIFEGYVARLINDRNISFDVFLQGSSFMEWWKEWKKSKQDQFTESSSPLYEIMETESWKEGLNL*

Protein Length: 561

Fln nts: GGAGAGGGTAATATACAAACTGACAACAAGGTCTTCTCTGATTGCCTCAAGGATAATGATGCTCAACCAGCTCGCGTTCATCAGGGAGCTCTTCAGTTGTTCCTGCATATTATGGAGAACACAGATTTCCAAACAAAGATGCAGGTTTATACGGACTCAAAACAAAGGAAGCTGAAACCCATTATATTTGTGGGTCATTCCTTAGGAGGGGCAGTTGCAACTTTGGCTACACTATGGGTACTGGAAAAGAGGCTTAGGCAAAGTTCTCCTTTTTGTATAACATTTGGAAGTCCTTTAGTGGGGGATGTAGGACTTGTTGAAGCAGTTGGCCGTGAAAATTGGGCAGGxxxTAACTTTTGTCATGTGGTTTCCAAGCATGATATTGTTCCTCGAATGCTCCTTGCAACTTTTGAGTCAATCGCTGAACCCTTGATTGCTATCCTGCCCTACTGGCAAGGCATAATGACTAATGACAGTAAAACTGTACCTGATTCTTCTATTCAAGATGCTTGTAAGACTCTTCTTAAGAATGTACTGCAGGATACTCATATAGTAACAAAGTATGGGCCCGACTCTCTGAGGGAGTCAGATGGAGCTATCAAGAGAAGCCCATACAAACCTTTTGGCACTTATATGTTTTGTTCAGTCGAGGGTGCAGCTTGTATTGATAATTCTGAGACCGTTTTGAAGATTCTTCATTTGACAATGCAGAGCCACGAAAAGCCTTATGATAATATCGTACAGGACTGTTTTAAAGAGCATGTAGAGTATGGTTCTGTTTTGAAACATGTCATACAGAAGTCCATCAGTGGGAAAAGAAGTGCAAAGTGTGATTCAGAATCTTCTTACAAGATGGGTATTTCACTGCAGCTGGAGGCCATTGGTATCGGTGCTCAGGATGATCATGCACAGATTGCCCTACAAATAGCAAGAAATATGGAAAACAGGCATAGCTCAAATGTTGCTAAGCTAGCAATTGAATTAAGCGAGAAACAATGTATTATGGCAGAGATTGAGTGGTATAAAGAGCGTTGTGAAAAGGAAGATGGCATCACATATTATGATTCTTTTAGGAAACACAACCATATCGATGCTAATTTATGCAGGGAAAGTCTCGCCAAGTTTTGGGATGATATTATTAAAATGTGGGAAAATCATGAGTTGCCCCATGATTTCCAATCTCAAAATAAGTGGATAAACGCTGGCACTGCTTATAGAAGACTTGTGGAGCCTCTGGATATTGCACATTATTATGGCATGTCTAATGGTAAAGGCAACTATCTTTCAGATGGAAGACCTACTCGTCATAAAGTTCTTGAGAAATGGATGGAAGAGAAAGAAAAAACTCGCAGTTCAAAAGGTAGGAGCGGGCGTACCGAGCTTGCATCCCTCACTCAGGACTCCTGCTTTTGGGCACATGTAGAAGAGGCTTTGAAAGAGTTGAAAAATCTGGAGCAGAGCCAACACCAAAAGCTGGAAAGCCTTGAAATATTTGAAGGTTATGTGGCAAGATTGATCAATGATCGCAACATTTCCTTTGATGTTTTCTTGCAAGGGAGCAGCTTCATGGAATGGTGGAAAGAATGGAAAAAATCCAAGCAAGATCAATTCACCGAATCGAGCTCTCCTTTGTATGAAATAATGGAAACAGAAAGCTGGAAGGAAGGGCTGAACTTGTAGATGGCTGCGTGGACATTGGAAAACTGTTTCAATTAGAGAAGTTTGTTTTCTCAGATGTCATTTCCCTTAGAGAAGGTTGTTTCAATTAGAGAAGGTTGTTTTCTCAGATGTAACTTCCTCGTTCCACTTAGGTTTCGTGTCTTTAGTTAGTGACTTCTTAATTTCCATGTTCTATTTTGGTTTCGTGTCTTTAGGTTGTGATTTTCTTTCATTTGTTTAAATTAGCGTGATCAATTAGGGAACTTGTTCAAGTAGGTTTTTTGCTTTTAAGATGTAATTTCTTCGTTTTAATTAGGTTCTGTGTTTTTAAGAAAGAGAGTTAAGATATTCCACAATAGTATGTGAATTTTATGGATG

Fln Alignment:

Contig21631___GEGNIQTDNKVFSDCLKDNDAQPARVHQGALQLFLHIMENTDFQTKMQVYTDSKQRKLKPIIFVGHSLGGAVATLATLWVLEKRLRQSSPFCITFGSPLVGDVGLVEAVGRENWAGxNFCHVVSKHDIVPRMLLATFESIAEPLIAILPYWQGIMTNDSKTVPDSSIQDACKTLLKNVLQDTHIVTKYGPDSLRESDGAIKRSPYKPFGTYMFCSVEGAACIDNSETVLKILHLTMQSHEKPYDNIVQDCFKEHVEYGSVLKHVIQKSISGKRSAKCDSESSYKMGISLQLEAIGIGAQDDHAQIALQIARNMENRHSSNVAKLAIELSEKQCIMAEIEWYKERCEKEDGITYYDSFRKHNHIDANLCRESLAKFWDDIIKMWENHELPHDFQSQNKWINAGTAYRRLVEPLDIAHYYGMSNGKGNYLSDGRPTRHKVLEKWMEEKEKTRSSKGRSGRTELASLTQDSCFWAHVEEALKELKNLEQSQHQKLESLEIFEGYVARLINDRNISFDVFLQGSSFMEWWKEWKKSKQDQFTESSSPLYEIMETESWK
B8LLY7_______________GEGKIQTDNKVFSGCLKGNDDQPALVHQGALKLFLRIMENTDFQAKMQIYTDSKQRKLKPIIFVGHSLGGAVATLATLWVLEKRLRQSSPFCITFGSPLVGDVGLVEAVGCENWAGxNFCHVVSTHDIVPRMLLAPIESIAEPLIAILPYWQDIMANDSKIVPDSFIQDACRTLLNNV--------NYGLDSVKELDGVIKKSPYRPFGTYMFCSGEGAACIDNSETVMKILHLTMQRHEKPYANIVQGCFSEHIEYGSVLNHVIEKSISGRRTEKPDSESSYEMGMSLQLEAIGVGAQNDDAPIALQIARDVENKHNTNVAKLTIELSEKQCIMAELEWYKERCEKEVGITYYDSFRKHKDVDANLCRVRLAEFWDKIIEMWERHELPSDFQSQNKWINAGTAYRRLVEPLDIAHYYRMCKGKGNYLSDGRPTRHKVLQKWMEEKENTRGSRGQKGRTKLASLTQDSCFWAHLEEALKELESLKQDQHQKLESLEMFEGYVTRKINDRSVSSDVFLEGSSFMEWWKEWKEYKQNQFPEWSSTLYEIMEGESWK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain