SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene21551

Length: 800 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene21551

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Non-specific lipid-transfer protein n=4 Tax=Picea sitchensis RepID=A9NJW4_PICSI	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	e value	Identity
Sma3	lipid binding	GO:0008289	Molecular Function	0.0	-
Sma3	lipid transport	GO:0006869	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Plant lipid transfer protein/hydrophobic protein helical domain	IPR013770	-	-
Sma3		IPR003612	-	-
Sma3	Plant lipid transfer protein/Par allergen	IPR000528	-	-

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
30	33			66	0.997452
31		33	66		0.997452
32	33		66		0.997452
33	33		66		0.997452
34		33	33		0.997753
251	33		66		0.997452
401		82		17	1.0
480		65	34		1.0
497		36	63		1.0
619		70		29	1.0
688	4	32	4	60	1.0
692	10			89	0.999919
695	6	53		40	1.0
696	13			86	0.999973
698	14			85	0.999981
701	9	9	27	54	1.0
707		33	66		1.0
710	33	66			1.0
711	88		11		0.923564
721			25	75	1.0
730	25	75			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain