SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene21307

Length: 835 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene21307 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	enhanced disease susceptibility 1 protein [Solanum tuberosum]	-	-	4.0e-27	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	71%
Sma3	EDS1	-	-	2.964e-09	-

Source	Gene names
Sma3	B1175F05.21; GSVIVT00016176001; LES1_20t00001; Os09g0392100; OsI_31251; OsJ_29238; POPTRDRAFT_807962; POPTRDRAFT_823348; RCOM_1512820;

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002318626.1	disease resistance protein [Populus trichocarpa]	1.0e-36	46%

Full-Lengther Next Prediction

SNPs (tot: 16)

Position	A %	C %	G %	T %	Probability
326	14		85		0.993533
430		72		27	1.0
448		33	66		1.0
455		33		66	1.0
492		11		88	0.923564
551			12	87	0.992554
559		12	87		0.992554
560	12	87			0.992554
561	12			87	0.992554
562		87	12		0.992554
563			12	87	0.992554
567		12		87	0.992554
568			12	87	0.992554
570		12		87	0.992554
571			14	85	0.993533
668	88	11			0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain