SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene20752

Length: 975 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene20752

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Calcineurin B-like protein 01 n=1 Tax=Selaginella moellendorffii RepID=C4P7X6_SELML	-	-	0.0	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	73%
Sma3	Calcineurin B, putative	-	-	1.419e-26	-

Source	Gene names
Sma3	24.t00062; 26.t00079; 40.t00066; At1g64480; At4g01420; At4g16350; At4g17615; At4g26560; At4g26570; At4g33000; At5g24270; At5g47100; At5g55990; B1142C05.7; CBL1; CBL10; CBL2; CBL3; CBL4; CBL5; CBL6; CBL7; CBL8; CBL9; CnB; F1N19.5; F26P21_120; F3D13.2; FCAA

Source	GOs	Term	Type	Identity
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plant-type vacuole membrane	GO:0009705	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	cytosolic ribosome	GO:0022626	Cellular Component	-
Sma3	intrinsic to membrane	GO:0031224	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	transmembrane signaling receptor activity	GO:0004888	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	nucleoside-triphosphatase activity	GO:0017111	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-
Sma3	detection of calcium ion	GO:0005513	Biological Process	-
Sma3	apoptotic process	GO:0006915	Biological Process	-
Sma3	signal transduction	GO:0007165	Biological Process	-
Sma3	response to cold	GO:0009409	Biological Process	-
Sma3	response to water deprivation	GO:0009414	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	abscisic acid mediated signaling pathway	GO:0009738	Biological Process	-
Sma3	potassium ion import	GO:0010107	Biological Process	-
Sma3	stomatal movement	GO:0010118	Biological Process	-
Sma3	calcium-mediated signaling	GO:0019722	Biological Process	-
Sma3	cellular potassium ion homeostasis	GO:0030007	Biological Process	-
Sma3	hyperosmotic salinity response	GO:0042538	Biological Process	-
Sma3	hypotonic salinity response	GO:0042539	Biological Process	-
Sma3	innate immune response	GO:0045087	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Toll/interleukin-1 receptor homology (TIR) domain	IPR000157	-	-
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Recoverin	IPR001125	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	Calcium-binding EF-hand	IPR002048	-	-
Sma3	NB-ARC	IPR002182	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3		IPR014045	-	-
Sma3		IPR015757	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-hand	IPR018248	-	-
Sma3	EF-HAND 2	IPR018249	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G17615.1	CBL1, ATCBL1, SCABP5 calcineurin B-like protein 1 chr4:9817142-9818995 FORWARD LENGTH=213	66%
RefSeq	Arabidopsis thaliana	NP_567533.1	calcineurin B-like protein 1 [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002318422.1	predicted protein [Populus trichocarpa]	72%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
829	10		90		0.90298
922	85	14			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain