SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene18950

Length: 897 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene18950

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Sugar transporter, putative n=1 Tax=Ricinus communis RepID=B9RZ57_RICCO	-	-	5.0e-16	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%

Source	Gene names
Sma3	At2g20780; F5H14.25; GSVIVT00025836001; PLT4; VITISV_017987;

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	sugar:hydrogen symporter activity	GO:0005351	Molecular Function	-
Sma3	substrate-specific transmembrane transporter activity	GO:0022891	Molecular Function	-
Sma3	carbohydrate transport	GO:0008643	Biological Process	-
Sma3	transmembrane transport	GO:0055085	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Sugar/inositol transporter	IPR003663	-	-
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT2G20780.1	Major facilitator superfamily protein chr2:8947496-8949170 REVERSE LENGTH=526	3.0e-18	56%
RefSeq	Arabidopsis thaliana	NP_179671.2	putative polyol transporter 4 [Arabidopsis thaliana]	4.0e-18	56%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LLD6

Fln msg: Warning!, your query overlaps and the subject is separated, your sequence is shorter than subject: 156 - 538. Was predicted as Complete, but is very much shorter than de subject

Fln protein: MVPAAGALDSEGGKGQEAMDMDSSKPTKKIPRxxxxxxxxNWVLGGDIFPLRLRAKAASLGVAVERGMSGVVSMTFLSISRAMTVRRMFCLLLAVSALCLIFLYSCVPEPFRVKPQEYLDKMATDPSELEPGNRRGVPVEAETAVPHLLTGGVSQ*

Protein Length: 157

Fln nts: ATGGGGGATTCAACTCCCAGAGGTGCGCGATAAGAATATAAATCAAGGATCCCCATCCTCTAGAGTGCAAACACAGCAGCAACA_-_ATGGTGCCAGCTGCTGGAGCTCTAGATTCCGAGGGTGGGAAAGGGCAAGAGGCCATGGATATGGATAGTTCGAAGCCAACGAAGAAGATTCCCAGAxxxxxxxxxxxxxxxxxxxxxxxxAACTGGGTGCTGGGAGGCGATATTTTCCCTCTTAGACTCCGGGCCAAGGCGGCCAGCCTTGGGGTGGCCGTTGAACGAGGCATGAGTGGGGTGGTCTCAATGACATTTCTCAGCATTTCCAGAGCAATGACTGTGCGTAGAATGTTCTGCCTCTTGTTAGCTGTTTCGGCTCTCTGTTTAATCTTCTTATACTCCTGTGTACCGGAACCTTTCCGCGTGAAACCTCAGGAATATTTAGACAAAATGGCAACAGATCCGTCAGAGCTTGAGCCTGGTAACAGGAGGGGTGTTCCAGTGGAAGCAGAAACAGCCGTACCACACTTGCTAACAGGAGGGGTATCCCAGTGA___AAGCAGAAACAGCCGTATCATGAACGTATTCTACTGAAAACTACGATATAACTACGATATATTTTATATGACCCGGGTATGTCCGAAGCTGCACCATAAAGAAAAGGGAAAATAGTTTGTCATATGTAGTCCATAGGGTTTGTGTATGTTTAAGTGCAAGTTGATGTAATGTATATTGTCGTTACTTACTTTTTTCTTGATTGTTTTGGATTTATTACGGGTGGTTGTGCGATTCGGATTCGGTCTCAGCCACAGCTGAAAAAAGTTAAAGGCTAACCATTTCTATCAATGTATACGAGATCTATATTTACGATTTTCTAATAAAAGCCACGTTTAAATTAGTGTAC

Fln Alignment:

Contig18950___MVPAAGALDSEGGKGQEAMDMDSSKPTKKIPRNSWNGTCxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTVGMGPVNWVLGGDIFPLRLRAKAASLGVAVERGMSGVVSMTFLSISRAMTVRRMFCLLLAVSALCLIFLYSCVP-----------EPFRVKPQEYLDKMATDPSELEPGNRRGVPVEAETAV
B8LLD6_______________MVSAAGTLDSVGGREPVAMEMDNSKPRKKIPRNKFVIACxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSVGMGPVNWVLGAEIFPLRLRAKAASLGVGVNRGMSGVVSMTFISISNAITVPGTFYLFAGVSALCSIFIYFCVPETKGKTLEEIVESFHVKARGSPDKTAMGPSELELGNSRAIPVKAETAV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain