SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene18442

Length: 2052 nt

UniGene Fasta

>sp_v3.0_unigene18442
CACTAAGTCATATATATACATTTTATATACCCCCGGACAACTGCAATTATTGCTCACTTGCTTCAGCATCAGCATATCTGTAGGTTCATCTGACCGCGTTTAATGTGCATGGATAAACAATCTCTCATGTCCTGGTCAACAGCACAGGAAAAGATTATATCTGCAGTTCAAAATAAAAGGTGAAGCGTGAAATACCTGTAAAGCACATGGGTTCTGCAGATGTGGGGTTTGCAGCATTTTCAATAGTTGAGCGGAACAGAGGCGCAGGTTCGAATCGCAGTAGAAGTTGAAAGGATACTTGTATAAGTAAATAGTTAGCTGGTCAGGAAGTAAATAGCATTGTTGATGTTCGGCTCCCGAAGGCGATGAAGGAGATGAAGATCAGGGAGAATGCAGATAATAAGGAAATAGTGCCATCAGTTGTGGAGGGAAATGGTACAGAAGCAGGCCATGTAATTTCCACAACCATCGGTGGTCGAGATGGGCAGCCTAAGCAAACCATAAGTTACATGGCAGAGCGTGTGGTCGGTAGCGGGTCTTTTGGAATTGTGTTTCAGGCTAAATGCCTGGAGACAGGCGAGAGTGTGGCTATCAAAAAGGTGTTGCAAGATAAGCGGTATAAAAACAGAGAGTTGCAGATGATGCGTTTTCTAGACCATCCAAATGTGGTTTCCTTGAAGCACTGTTTCTTTTCTACAACCAACAGGGATGAGTTGTATCTGAATCTGGTGTTAGAGTATGTGCCAGAGACTGTTTACAAGGTTGAGAGGCATTATGGTAGGACGAATCACCAGATGCCTGTTCTTTATACAAAGCTCTATACTTATCAGCTCTGCAGAGCATTGGCTTATATCCATGGTGGTTTTGGTATATGTCATAGAGACATCAAGCCACAAAATCTTCTGGTCAATCCTCACACCCACCAGCTTAAAATATGTGACTTTGGCAGCGCAAAAGTTCTGGTTAAGGGTGAACCAAACATATCTTACATTTGCTCAAGGTATTATCGAGCTCCTGAGCTCATATTCGGAGCCACAGAGTATACCACGGCAATTGATATGTGGTCGGCAGGTTGTGTCCTAGCTGAGCTTCTTCTGGGTCAGCCTCTGTTTCCTGGTGAGAGTGCAGTAGACCAGCTTGTGGAGATCATTAAGATCCTTGGGACCCCAACTCGAGAGGAAATTAAATGTATGAATCCCAATTATACAGAGTTCAAGTTTCCCCATATAAAAGCTCACCCTTGGCACAAGGTTTTTCACAAGCGAGTGCCAGCAGACGCAATTGATCTTATCTCTAGGCTGCTTCAGTACTCACCAAATCTACGTTGTGCCCCTTTGGAAGCTTGTGTGCATCCATTTTTTGATGAACTCCGCGATCCTAACACTCGACTGCCAAATGGGCATCCTTTGCCTGCTCTTTTTGACTTCAAGCCAGAGGAATTAAAGGGTGCCACCCTTGAGCTTCTTCGGAAGTTGATTCCAGAGCATGCAAGGAGGCAATGTCCACATCTCGGCCTTTAGATATTGTTGCATATTGGTTATGGTGAAATTCTGGTATCCTTTTTATCCTAAGCTTAAGGAGCCCGAGAATTTTTGATGGCTAGCAAGTGGTGTTCACAGATTGGGGTTCAGAAAGGAAACGGAGCATTTTAAAGTAATGAGATCATTTATCCTTTCATTGGATTGGTTATACTCGAAAATTGCAGATTGGTTTTGCAATCAGTCTAACTATAACACCAAATCCCACAAAGAGTGCAGCCTCTATGTATTAAATTAATGCGAAAGTAGATCTTTTTACAACAATTTTTTAGGTTCTAGCTGGGATCTGGACTTGTAGACAAAGGCACATAAAGCACACTTCAGTTTGAGATTCACTTATGGGTGGTTGGTCCCAATACATTTTTGCCCTAGTTTGAGAGGCTGATACATTAAGCTTCATCTCACACTCCCAGAAAAGTTATGCATGTTTTTTACTGAGCAGCTATTAGCCTATTCAGTATATCTAGAACGAATCGAAGGTGAAGGCATATTGATGTAGCGGCGAGTTCGAAGT

Ace file of the UniGene sp_v3.0_unigene18442

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Shaggy-related protein kinase epsilon [Arabidopsis thaliana] sp\|Q8VZD5.1\|KSG5_ARATH RecName: Full=Shaggy-related protein kinase epsilon; AltName: Full=ASK-epsilon gb\|AAL57679.1\| AT5g14640/T15N1_130 [Arabidopsis thaliana] gb\|AAQ65089.1\| At5g14640/T15N1_130	-	-	0.0	82%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	96%
Sma3	Glycogen synthase kinase-3 beta, putative	-	-	2.472e-20	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	1.603e-18	-
Sma3	[Tau protein] kinase.	EC:2.7.11.26	-	7.396e-17	-

Source	Gene names
Sma3	ASK1; ASK10; ASK2; ASK3; ASK4; ASK5; ASK6; ASK7; ASK8; ASK9; AT1G06390; AT1G09840; AT3G05840; AT4G18710; At1g06390; At1g09840; At1g57870; At2g30980; At3g05840; At3g61160; At4g00720; At4g18710; At5g14640; At5g26751; BIN2; CHLREDRAFT_114692; DWF12; F10A16.1

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	brassinosteroid mediated signaling pathway	GO:0009742	Biological Process	-
Sma3	regulation of protein localization	GO:0032880	Biological Process	-
Sma3	hyperosmotic salinity response	GO:0042538	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Zinc finger, RING-CH-type	IPR011016	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Zinc finger, C3HC4 RING-type	IPR018957	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G14640.1	ATSK13, SK13 shaggy-like kinase 13 chr5:4719350-4721772 REVERSE LENGTH=410	82%
RefSeq	Arabidopsis thaliana	NP_196968.2	Shaggy-related protein kinase epsilon [Arabidopsis thaliana]	82%
RefSeq	Populus trichocarpa	XP_002320270.1	predicted protein [Populus trichocarpa]	80%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5ABL7

Fln msg:

Fln protein: MKEMKIRENADNKEIVPSVVEGNGTEAGHVISTTIGGRDGQPKQTISYMAERVVGSGSFGIVFQAKCLETGESVAIKKVLQDKRYKNRELQMMRFLDHPNVVSLKHCFFSTTNRDELYLNLVLEYVPETVYKVERHYGRTNHQMPVLYTKLYTYQLCRALAYIHGGFGICHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSAGCVLAELLLGQPLFPGESAVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPHIKAHPWHKVFHKRVPADAIDLISRLLQYSPNLRCAPLEACVHPFFDELRDPNTRLPNGHPLPALFDFKPEELKGATLELLRKLIPEHARRQCPHLGL*

Protein Length: 386

Fln nts: CACTAAGTCATATATATACATTTTATATACCCCCGGACAACTGCAATTATTGCTCACTTGCTTCAGCATCAGCATATCTGTAGGTTCATCTGACCGCGTTTAATGTGCATGGATAAACAATCTCTCATGTCCTGGTCAACAGCACAGGAAAAGATTATATCTGCAGTTCAAAATAAAAGGTGAAGCGTGAAATACCTGTAAAGCACATGGGTTCTGCAGATGTGGGGTTTGCAGCATTTTCAATAGTTGAGCGGAACAGAGGCGCAGGTTCGAATCGCAGTAGAAGTTGAAAGGATACTTGTATAAGTAAATAGTTAGCTGGTCAGGAAGTAAATAGCATTGTTGATGTTCGGCTCCCGAAGGCG_-_ATGAAGGAGATGAAGATCAGGGAGAATGCAGATAATAAGGAAATAGTGCCATCAGTTGTGGAGGGAAATGGTACAGAAGCAGGCCATGTAATTTCCACAACCATCGGTGGTCGAGATGGGCAGCCTAAGCAAACCATAAGTTACATGGCAGAGCGTGTGGTCGGTAGCGGGTCTTTTGGAATTGTGTTTCAGGCTAAATGCCTGGAGACAGGCGAGAGTGTGGCTATCAAAAAGGTGTTGCAAGATAAGCGGTATAAAAACAGAGAGTTGCAGATGATGCGTTTTCTAGACCATCCAAATGTGGTTTCCTTGAAGCACTGTTTCTTTTCTACAACCAACAGGGATGAGTTGTATCTGAATCTGGTGTTAGAGTATGTGCCAGAGACTGTTTACAAGGTTGAGAGGCATTATGGTAGGACGAATCACCAGATGCCTGTTCTTTATACAAAGCTCTATACTTATCAGCTCTGCAGAGCATTGGCTTATATCCATGGTGGTTTTGGTATATGTCATAGAGACATCAAGCCACAAAATCTTCTGGTCAATCCTCACACCCACCAGCTTAAAATATGTGACTTTGGCAGCGCAAAAGTTCTGGTTAAGGGTGAACCAAACATATCTTACATTTGCTCAAGGTATTATCGAGCTCCTGAGCTCATATTCGGAGCCACAGAGTATACCACGGCAATTGATATGTGGTCGGCAGGTTGTGTCCTAGCTGAGCTTCTTCTGGGTCAGCCTCTGTTTCCTGGTGAGAGTGCAGTAGACCAGCTTGTGGAGATCATTAAGATCCTTGGGACCCCAACTCGAGAGGAAATTAAATGTATGAATCCCAATTATACAGAGTTCAAGTTTCCCCATATAAAAGCTCACCCTTGGCACAAGGTTTTTCACAAGCGAGTGCCAGCAGACGCAATTGATCTTATCTCTAGGCTGCTTCAGTACTCACCAAATCTACGTTGTGCCCCTTTGGAAGCTTGTGTGCATCCATTTTTTGATGAACTCCGCGATCCTAACACTCGACTGCCAAATGGGCATCCTTTGCCTGCTCTTTTTGACTTCAAGCCAGAGGAATTAAAGGGTGCCACCCTTGAGCTTCTTCGGAAGTTGATTCCAGAGCATGCAAGGAGGCAATGTCCACATCTCGGCCTTTAG___ATATTGTTGCATATTGGTTATGGTGAAATTCTGGTATCCTTTTTATCCTAAGCTTAAGGAGCCCGAGAATTTTTGATGGCTAGCAAGTGGTGTTCACAGATTGGGGTTCAGAAAGGAAACGGAGCATTTTAAAGTAATGAGATCATTTATCCTTTCATTGGATTGGTTATACTCGAAAATTGCAGATTGGTTTTGCAATCAGTCTAACTATAACACCAAATCCCACAAAGAGTGCAGCCTCTATGTATTAAATTAATGCGAAAGTAGATCTTTTTACAACAATTTTTTAGGTTCTAGCTGGGATCTGGACTTGTAGACAAAGGCACATAAAGCACACTTCAGTTTGAGATTCACTTATGGGTGGTTGGTCCCAATACATTTTTGCCCTAGTTTGAGAGGCTGATACATTAAGCTTCATCTCACACTCCCAGAAAAGTTATGCATGTTTTTTACTGAGCAGCTATTAGCCTATTCAGTATATCTAGAACGAATCGAAGGTGAAGGCATATTGATGTAGCGGCGAGTTCGAAGT

Fln Alignment:

Contig18442___MKEMKIRENADNK--------EIVPSVVEGNGTEAGHVISTTIGGRDGQPKQTISYMAERVVGSGSFGIVFQAKCLETGESVAIKKVLQDKRYKNRELQMMRFLDHPNVVSLKHCFFSTTNRDELYLNLVLEYVPETVYKVERHYGRTNHQMPVLYTKLYTYQLCRALAYIHGGFGICHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSAGCVLAELLLGQPLFPGESAVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPHIKAHPWHKVFHKRVPADAIDLISRLLQYSPNLRCAPLEACVHPFFDELRDPNTRLPNGHPLPALFDFKPEELKGATLELLRKLIPEHARRQCP
D5ABL7_______________MKEMKTRENADDKGSFCKKFDEIVPSVVEGNGTEAGHVISTTIGGRDGQPKQTISYMAERVVGSGSFGIVFQAKCLETGESVAIKKVLQDKRYKNRELQMMRFLDHPNVVSLKHCFFSTTNRDELYLNLVLEYVPETVYRVERHYGRTNHQMPVIYTKLYTYQLCRALAYIHGGFGICHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSAGCVLAELLLGQPLFPGESAVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPHIKAHPWHKVFHKRVPAEAIDLISRLLQYSPNLRCAPLEACVHPFFDELRDPNTRLPNGHPLPALFDFKPEELKGATLELLRKLIPEHARRQCP

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain