SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene17717

Length: 1542 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene17717

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Mitogen activated protein kinase 1 n=2 Tax=Selaginella moellendorffii RepID=D8QQG3_SELML	-	-	0.0	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Sma3	MAP kinase	-	-	9.593e-39	-

Source	ECs	Term	Type	e value	Identity
Sma3	Mitogen-activated protein kinase.	EC:2.7.11.24	-	0.0	-

Source	Gene names
Sma3	AP22.98; AT1G10210; Asmap1; At1g01560; At1g07880; At1g10210; At1g18150; At1g59580; At2g18170; At2g42880; At2g43790; At2g46070; At3g14720; At3g45640; At3g59790; At4g11330; At4g36450; At5g19010; BIMK1; C7A10.910; CHLREDRAFT_183031; CHLREDRAFT_193901; CHLRED

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	MAP kinase activity	GO:0004707	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	activation of MAPK activity involved in osmosensory signaling pathway	GO:0000169	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	intracellular protein kinase cascade	GO:0007243	Biological Process	-
Sma3	response to cold	GO:0009409	Biological Process	-
Sma3	response to wounding	GO:0009611	Biological Process	-
Sma3	plant-type hypersensitive response	GO:0009626	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	response to ethylene stimulus	GO:0009723	Biological Process	-
Sma3	auxin mediated signaling pathway	GO:0009734	Biological Process	-
Sma3	response to abscisic acid stimulus	GO:0009737	Biological Process	-
Sma3	abscisic acid mediated signaling pathway	GO:0009738	Biological Process	-
Sma3	induced systemic resistance, jasmonic acid mediated signaling pathway	GO:0009864	Biological Process	-
Sma3	camalexin biosynthetic process	GO:0010120	Biological Process	-
Sma3	response to chitin	GO:0010200	Biological Process	-
Sma3	response to hydrogen peroxide	GO:0042542	Biological Process	-
Sma3	ovule development	GO:0048481	Biological Process	-
Sma3	response to indolebutyric acid stimulus	GO:0080026	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Pleckstrin homology domain	IPR001849	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	MAP kinase, conserved site	IPR003527	-	-
Sma3	Dihydroneopterin aldolase/epimerase domain	IPR006157	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	JNK MAP kinase	IPR008351	-	-
Sma3	MAP kinase, p38	IPR008352	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Pleckstrin homology-like domain	IPR011993	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G10210.1	ATMPK1, MPK1 mitogen-activated protein kinase 1 chr1:3349579-3350776 FORWARD LENGTH=370	68%
RefSeq	Arabidopsis thaliana	NP_001031017.1	mitogen-activated protein kinase 1 [Arabidopsis thaliana]	68%
RefSeq	Populus trichocarpa	XP_002302017.1	predicted protein [Populus trichocarpa]	71%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P1S7

Fln msg:

Fln protein: MATKVDPPNGVAAEGKHYYSMWRNTFEIDTKYIPIKPIGKGAYGIVCSAKNTETNEKVAIKKIGNVFENRIDAMRTLREIKLLRQLAHDNIITLKDIMTPVGRSNFRDVYLVYDLMDTDLHQIIKSSQALTDDHYQYFIYQLLRGLKYLHSANVLHRDLKPSNLLLTANCDLKICDFGLARTNCETGQFMTEYVVTRWYRAPELLLSCDEYGPSIDVWSVGCILAELLGRQPIFPGKDYINQLKLIINVIGSPAEDDLYFVQSQKACSYIKSLPHVPSASLQRLYPQANPTAIDLLDKMLVFDPYKRITVTEALEHPYFSALHDPRLEPSATAPFELDMPDEELRVQELREMVWREMIYYHPEAANIL*

Protein Length: 370

Fln nts: ATCTTTGGGATCCAAACAAAATCCCGCATATTCGCCTATTCGCCTAAATTCATGCCTGCCAAATTCATGGCTACCCCTATCCATATACACACGAAATATATCTCTGTGTCTTGTTGCTGACCACTTCTTTTCCCTGCTGCTGCATCAACGTCTTCTACTTAGCCCTGTGGCTTCTGCCTACAGGATCAAGGATTAGGG_-_ATGGCCACCAAGGTGGATCCTCCGAATGGGGTTGCTGCAGAGGGGAAGCACTACTATTCCATGTGGCGCAACACGTTTGAGATAGACACCAAGTATATTCCCATCAAGCCCATTGGGAAGGGTGCTTACGGGATTGTGTGCTCGGCTAAAAACACAGAGACCAACGAGAAAGTGGCTATTAAGAAGATCGGCAACGTATTCGAGAACCGGATCGATGCCATGAGGACACTTAGGGAAATCAAGCTTCTCAGGCAGCTCGCTCATGATAACATAATTACCTTGAAGGACATCATGACCCCTGTTGGCAGGTCTAATTTCAGGGATGTTTATCTGGTTTATGATCTCATGGATACTGACCTTCACCAGATCATCAAGTCTTCTCAGGCCCTCACTGATGATCACTACCAGTACTTCATCTACCAGTTGCTGCGAGGCCTAAAATATTTGCATTCTGCCAACGTGTTGCATAGAGATTTGAAGCCAAGTAATCTATTATTGACTGCCAATTGTGACCTTAAGATATGTGATTTTGGTTTAGCTCGAACAAACTGTGAGACAGGGCAGTTCATGACTGAATATGTTGTCACTCGATGGTATAGGGCTCCTGAATTGCTTCTGTCCTGTGATGAGTATGGTCCATCTATTGATGTGTGGTCTGTAGGCTGTATTTTGGCAGAGTTGTTGGGTCGACAGCCAATATTCCCTGGTAAGGATTATATCAATCAACTTAAACTGATCATCAATGTTATTGGCAGCCCAGCGGAAGATGATCTTTACTTTGTCCAGAGCCAGAAGGCCTGCAGCTACATAAAATCACTTCCTCATGTTCCCTCTGCTTCTCTGCAACGTTTATATCCTCAGGCAAATCCTACTGCCATCGACCTACTAGATAAGATGCTAGTTTTTGATCCTTACAAGAGGATCACTGTTACAGAGGCTCTTGAGCATCCATACTTCTCTGCATTACATGATCCAAGGCTCGAGCCTTCTGCAACAGCACCTTTTGAATTGGACATGCCTGATGAGGAATTGAGAGTACAGGAATTGAGGGAGATGGTCTGGAGAGAAATGATATATTATCATCCAGAAGCTGCAAATATATTATAG___ATATGCAAAATTATCCATTTGTTTTTTGTTGGATAACTTCATGGATGAGAAGATGAGATTTAGAGATAGATAAAATTTGAATATATCTCAAAGCACGGCCTTGAGTTTTGTTCAATGTCTGTATATATGTAGACTTTCAATTTGTACTTTCTCCTATCAATTCCATAACATCATATTTCATTGTAAAAAACATACATGGTTATTTGTAATATATTAAGAACCCTCCCATTGTGAATA

Fln Alignment:

Contig17717___MATKVDPPNGVAAEGKHYYSMWRNTFEIDTKYIPIKPIGKGAYGIVCSAKNTETNEKVAIKKIGNVFENRIDAMRTLREIKLLRQLAHDNIITLKDIMTPVGRSNFRDVYLVYDLMDTDLHQIIKSSQALTDDHYQYFIYQLLRGLKYLHSANVLHRDLKPSNLLLTANCDLKICDFGLARTNCETGQFMTEYVVTRWYRAPELLLSCDEYGPSIDVWSVGCILAELLGRQPIFPGKDYINQLKLIINVIGSPAEDDLYFVQSQKACSYIKSLPHVPSASLQRLYPQANPTAIDLLDKMLVFDPYKRITVTEALEHPYFSALHDPRLEPSATAPFELDMPDEELRVQELREMVWREMIYYHPEAANIL
A9P1S7_______________MATRVNPPCGVFAEGKHYYSMWRNTFEIDTKYIPIKPIGKGAYGIVCSAKNAETNEKVAIKKIINAFENQTDARRTLREIKLLRLFAHDNIIALKDIMTPACRTNFNDVYLVYDLMDTDLHQIIKSAQVLTDDHCKYFIYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTNCEKGQFMTEYVVTRWYRAPELLLSCEEYGTSIDIWSVGCIFAELLGRKPIFPGKDYINQLKLIVNVLGSPDEDDLDFIESQKARSYIKSLPVTSHASLQRLYPRANPFAISLLDKMLSFDPRKRITVTEALEHPYFSALHDPSLEPSATAPFDLDMPDEELKEEELRDMFINEVLYYHPEAANTL

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
866	87		12		0.992554
1282		19		80	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain