SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene17023

Length: 1786 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene17023

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI	-	-	0.0	92%
FL-Next	sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%

Source	ECs	Term	Type	e value	Identity
Sma3	Fructose-bisphosphate aldolase.	EC:4.1.2.13	-	0.0	-

Source	KEGGs	Term	Identity
Sma3	Glycolysis / Gluconeogenesis	00010	%
Sma3	Pentose phosphate pathway	00030	%
Sma3	Fructose and mannose metabolism	00051	%
Sma3	Methane metabolism	00680	%
Sma3	Carbon fixation in photosynthetic organisms	00710	%
Sma3	Biosynthesis of phenylpropanoids	01061	%
Sma3	Biosynthesis of terpenoids and steroids	01062	%
Sma3	Biosynthesis of alkaloids derived from shikimate pathway	01063	%
Sma3	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	%
Sma3	Biosynthesis of alkaloids derived from histidine and purine	01065	%
Sma3	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066	%
Sma3	Biosynthesis of plant hormones	01070	%
Sma3	Metabolic pathways	01100	%
Sma3	Biosynthesis of secondary metabolites	01110	%

Source	GOs	Term	Type	e value	Identity
Sma3	fructose-bisphosphate aldolase activity	GO:0004332	Molecular Function	0.0	-
Sma3	glycolysis	GO:0006096	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Fructose-bisphosphate aldolase, class-I	IPR000741	-	0.0	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G01140.1	Aldolase superfamily protein chr2:95006-96491 REVERSE LENGTH=391	86%
RefSeq	Arabidopsis thaliana	NP_178224.1	fructose-bisphosphate aldolase, class I [Arabidopsis thaliana]	86%
RefSeq	Populus trichocarpa	XP_002311480.1	predicted protein [Populus trichocarpa]	89%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVA7

Fln msg:

Fln protein: MAASVLKAGVKLGTSQLTGQSLTQNIDSHKQPKGQRVSFAIRAGSYAEELVQTAKTIASPGRGILAIDESNATCGKRLASIGLENNETNRQAYRQLLLTTPGLGEYISGSILFEETLYQSTTDGRKFVDCLREQNIMPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEVLLDGEHSIDRTLEVAEKVWAEVFFYLAQNNVLFEGILLKPSMVTPGAEHKERATPEKVAEYTLKMLKRRVPPAVPGVMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTSLKTWKGLPENVEAAQRALLIRAKANSLAQLGRYSAEGESEESKKGMFVKGYTY*

Protein Length: 395

Fln nts: ATGGGGGCAAAACTCTGAATCCGAGTCTCAATTGATTAAAGTCTCGGAGATTTTCTGTTTGAAAGTTTAGGTAGCAGCA_-_ATGGCAGCCTCTGTTCTGAAGGCCGGTGTGAAATTGGGCACTTCTCAATTGACTGGTCAGTCGCTCACACAAAATATCGATTCCCACAAGCAACCCAAAGGGCAGAGGGTCTCCTTTGCGATCAGGGCCGGATCATATGCCGAGGAACTTGTTCAAACCGCGAAAACTATAGCATCTCCTGGGCGTGGTATTCTTGCCATAGACGAGTCCAATGCAACTTGTGGGAAGAGGCTTGCTTCCATCGGACTTGAAAACAACGAAACCAACCGCCAAGCATACAGACAACTCTTGTTGACTACACCAGGACTGGGGGAGTATATTTCTGGTTCCATCCTTTTTGAAGAGACCCTATACCAGTCCACAACCGATGGGAGGAAATTTGTTGACTGTTTGCGAGAGCAGAATATTATGCCCGGCATCAAAGTTGACAAGGGTTTAGTTCCACTGCCAGGATCAAACAATGAATCTTGGTGCCAGGGTTTGGATGGATTAGCCTCAAGATCTGCTGAGTACTACAAACAGGGTGCAAGATTTGCTAAATGGCGAACAGTTGTCAGCATACCCAATGGGCCTTCGGAGTTAGCTGTCAAGGAAGCTGCGTGGGGACTTGCACGTTATGCCGCTATCTCTCAGGACAATGGTCTTGTGCCCATTGTGGAGCCAGAGGTTCTTCTGGATGGAGAACATTCCATTGACAGAACCCTTGAAGTGGCGGAGAAAGTCTGGGCTGAGGTTTTCTTTTACTTGGCACAGAACAATGTGTTGTTTGAGGGTATTTTGTTAAAGCCCAGTATGGTGACTCCTGGTGCTGAGCACAAGGAGAGAGCAACCCCTGAAAAGGTTGCAGAATACACTCTAAAAATGCTTAAGAGGAGGGTGCCACCAGCTGTTCCTGGGGTTATGTTCTTGTCTGGAGGACAGTCTGAGGTTGAGGCAACTTTGAATTTGAATGCAATGAACCAAAGCCCAAATCCATGGCATGTTTCCTTTTCATATGCACGAGCATTGCAGAATACATCTCTCAAGACCTGGAAGGGTCTTCCAGAGAATGTTGAAGCAGCTCAGAGGGCGCTTCTTATTCGGGCCAAGGCTAATTCTCTGGCTCAGCTTGGGCGATACTCTGCTGAAGGTGAAAGTGAGGAGTCTAAGAAGGGAATGTTCGTTAAGGGATATACATATTAA___GAATGCGGGTCATAGTTTTCGTACTGGGAGAACTCGTTCAATGCGGATAGGTTAAGCTTTTACGTTTATTTATTTGGCACTTACAATCCTGAACTTTTTAAAGAGTTTATATTTTGGTCAATAATGGGCAAAGTGCAAATTGGTTGTAGCCTTTTACCCGATGTACAATCTTGAGAGTGTATGCCCCAACATAGTTTTTTATTAATTTTCAGGGTACAAACTTTATCAGAGATTTAAGGTTCTCTTTTATCTAAAATTCCTATAACCTCTTTGAGGAATTTTATCAAATTTTCAATGTCATTGAGTGTGTAGTCTGATATTTTGGTGTTCATTCCGTAATATTATTGATTTGTGTCATCGCGTTAATTACTTTCATAGCAAATATTTTTGTCCATGAAAATGGCACCGGTATGACTTGTCATCTGAGTCATTTTTTCGTTTGTGTAAAGATTTTACTATGTTGTTTTTAACGAATTAGAGAATGAAGTCTGACAATGTGCAATGAAATAAGTTACTCTCTTTTCC

Fln Alignment:

Contig17023___MAASVLKAGVKLGTSQLTGQSLTQNIDSHKQPKGQRVSFAIRAGSYAEELVQTAKTIASPGRGILAIDESNATCGKRLASIGLENNETNRQAYRQLLLTTPGLGEYISGSILFEETLYQSTTDGRKFVDCLREQNIMPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEVLLDGEHSIDRTLEVAEKVWAEVFFYLAQNNVLFEGILLKPSMVTPGAEHKERATPEKVAEYTLKMLKRRVPPAVPGVMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTSLKTWKGLPENVEAAQRALLIRAKANSLAQLGRYSAXXXXXXXXXXMFVKGYTY
A9NVA7_______________MAASVIKAGVRLGSSQWTGQSLTQNIDSHKQPKAQRVSMPIRAGSYAEELVQTAKTVASPGRGILAIDESNATCGKRLASIGLENNETNRQAYRQLLLTTPGLGEYISGSILFEETLYQSTTDGRKFVDCLREQNIMPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPNGPSDLAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHSIDRTLEVAEKVWAEVFFYLAENNVLFEGILLKPSMVTPGAEHKEKATPQQVADYTLKMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTSLKTWKGLPENIEAAQRALLIRAKANSLAQLGRYSAEGESEESKKGMFVKGYTY

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
818			0	97	0.917344
821	0			96	1.0
909		96		0	0.996219
1279		2		98	0.900134
1402		4		95	0.996599
1456	12			81	0.999943
1548	90		10		0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain