SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene16963

Length: 1752 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene16963

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI	-	-	0.0	91%
FL-Next	sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%

Source	ECs	Term	Type	e value	Identity
Sma3	Fructose-bisphosphate aldolase.	EC:4.1.2.13	-	0.0	-

Source	KEGGs	Term	Identity
Sma3	Glycolysis / Gluconeogenesis	00010	%
Sma3	Pentose phosphate pathway	00030	%
Sma3	Fructose and mannose metabolism	00051	%
Sma3	Methane metabolism	00680	%
Sma3	Carbon fixation in photosynthetic organisms	00710	%
Sma3	Biosynthesis of phenylpropanoids	01061	%
Sma3	Biosynthesis of terpenoids and steroids	01062	%
Sma3	Biosynthesis of alkaloids derived from shikimate pathway	01063	%
Sma3	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	%
Sma3	Biosynthesis of alkaloids derived from histidine and purine	01065	%
Sma3	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066	%
Sma3	Biosynthesis of plant hormones	01070	%
Sma3	Metabolic pathways	01100	%
Sma3	Biosynthesis of secondary metabolites	01110	%

Source	GOs	Term	Type	e value	Identity
Sma3	fructose-bisphosphate aldolase activity	GO:0004332	Molecular Function	0.0	-
Sma3	glycolysis	GO:0006096	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Fructose-bisphosphate aldolase, class-I	IPR000741	-	0.0	-
Sma3	Aldolase-type TIM barrel	IPR013785	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G38970.1	FBA2 fructose-bisphosphate aldolase 2 chr4:18163714-18165659 REVERSE LENGTH=398	81%
RefSeq	Arabidopsis thaliana	NP_568049.1	fructose-bisphosphate aldolase, class I [Arabidopsis thaliana]	81%
RefSeq	Populus trichocarpa	XP_002310291.1	predicted protein [Populus trichocarpa]	83%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NUC9

Fln msg:

Fln protein: MAAASGAVLKTPLSLRKSEWMGQALRPTSVNTSAQFQSYNATALSVRAGAYSEELIKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRQLLVSAPGLGQYISGAILFEETLYQSSTEGKKIVDILVQQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRCAEYYKQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIERTNEVALKVWSEVFFYLAENNVLFEGILLKPSMVTPGAECKERASPETVAQYTLNLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVDAAQKILLVRAKANSLAQLGKYSAEGESAESKEGMFVKGYTY*

Protein Length: 400

Fln nts: TATGGGGAATGAGTGTGGGATAAATAGTAGGCAGCTCCATCGGGCGATGGGGAGACACGCGAGACTTGCCCGTCAAAGGGAAAAGAAGTGCCGATTGCATTGCTCCTGCGACCTGATCTCATTCCCTATTGTCTGTTATTTCAATTCCTGCA_-_ATGGCGGCCGCTAGTGGAGCCGTGCTGAAGACACCTCTCAGCCTGAGAAAATCCGAATGGATGGGTCAGGCCCTCAGGCCGACGTCGGTGAATACTTCGGCCCAGTTCCAATCCTACAACGCTACTGCTCTCAGCGTCCGGGCCGGGGCTTACAGCGAAGAGTTGATCAAGACGGCGAAAACAGTGGCGTCTCCCGGGAGAGGCATCCTGGCGATGGACGAGTCCAACGCCACCTGCGGGAAACGGCTGGCGTCCATCGGGCTTGAGAACACGGAGGCGAACCGACAGGCATACAGGCAGCTGCTCGTCAGCGCGCCGGGTCTCGGACAGTACATCTCCGGCGCCATTCTCTTCGAGGAAACTCTGTACCAGTCCAGCACCGAAGGCAAGAAGATCGTAGACATCCTCGTGCAGCAGAACATAGTGCCCGGCATCAAAGTCGACAAGGGTCTGGTTCCTTTGGCTGGTTCAAACGACGAATCTTGGTGCCAAGGCCTAGACGGCCTCGCATCAAGGTGCGCTGAGTATTATAAGCAAGGAGCTCGCTTCGCCAAATGGCGTACAGTTGTGAGCATTCCCAACGGCCCCTCTGCTCTGGCCGTGAAAGAAGCTGCATGGGGTCTCGCCCGCTACGCGGCAATTGCTCAGGACAACGGTCTGGTTCCCATAGTGGAGCCAGAGATCCTGTTGGATGGAGAACACGGCATTGAGAGGACTAACGAAGTAGCGCTGAAGGTGTGGTCCGAGGTGTTCTTCTACTTAGCAGAGAACAACGTGCTGTTCGAAGGCATTCTGCTGAAGCCGAGCATGGTTACCCCTGGTGCCGAGTGTAAGGAGAGGGCCAGTCCCGAAACTGTTGCCCAATATACCCTGAACCTTCTCCGAAGAAGAGTTCCACCGGCCGTTCCTGGAATCATGTTCTTGTCTGGTGGGCAATCTGAGGTGGAGGCGACCTTGAACTTGAACGCGATGAACCAGGCGCCGAACCCGTGGCACGTATCATTCTCATATGCTCGTGCTCTGCAAAACACTTGCCTCAAGACATGGGGTGGCAGGCCCGAGAACGTGGACGCAGCCCAGAAGATCCTGCTGGTTCGGGCAAAGGCCAACTCCCTTGCACAGCTTGGCAAATACTCTGCTGAAGGCGAGTCTGCGGAGTCGAAGGAGGGAATGTTCGTGAAGGGCTACACTTATTAA___GCATACTAGTCCAGTGCAGTGGAGTCTAGTATAGTATGGTTGAAAAGCATAGTTACTAGTCCAGTGCAGTGGAGTCTAGTATAGTATGGTTGAAAAGCATAGCCACTAGTCCAGTGCGGTGGAGTCTAGTATAGTATGGTTGAAAAACATAGTTTTGCTCTATTTGAGCTTTGCTATATAGTTAGGCGTTTCATGCTGTTTTTGTAAGGTCACTATAATATGAACTTGTGTATTACATAATTGAGACAAGGGGAGGTCGTGGTCGATAGCTACCAGAATTGTATTTTAACTCCAAAATCGAAACACATGTTCAGCTTATGATGCGTATTTTCAGCTTGAATTCAGTGTTTTCTTTTCTTAATAAATAAATTCATGGATAAATGATCCTTCAGCAAAAAAAGAA

Fln Alignment:

Contig16963___MAAASGAVLKTPLSLRKSEWMGQALRPTSVNTSAQFQSYNATALSVRAGAYSEELIKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRQLLVSAPGLGQYISGAILFEETLYQSSTEGKKIVDILVQQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRCAEYYKQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIERTNEVALKVWSEVFFYLAENNVLFEGILLKPSMVTPGAECKERASPETVAQYTLNLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVDAAQKILLVRAKANSLAQLXXXXXXXXXXXXXXXMFVKGYT
A9NUC9_______________MAAATGAVLKTALSLRKSEWMGQALRPTSVNTSAQSQSYNATALSVRAGAYSEELIKTAKRVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRQLLVSAPGLGQYISGSILFEETLYQSTTDGKKMVDVLVQQDIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRCAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGLERTFEVALKVWAEVFFYLAENNVLFEGILLKPSMVTPGAECKDRASPETVAQYTLNLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWAGRPENVDAAQKILLVRAKANSLAQLGKYSAEGESAESKEGMFVKGYT

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
130			33	66	0.997452
1203			97	2	0.97849
1633		3		96	0.991164
1634	5			94	0.999996
1665		4		94	0.999888
1680	3			96	0.993037
1683			95	4	0.994598
1684		95		4	0.994598
1709	83		16		1.0
1728	88	11			0.999937
1730	88			11	0.999937
1743	66			33	1.0
1744	66		33		1.0
1745	66		33		0.997452
1747	50	50			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain