SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene13858

Length: 5064 nt

UniGene Fasta

>sp_v3.0_unigene13858
CGTCGTGACCTTGGCTGTCACTCAATTCCTCTCACTCACCACCCAAAAGATTATTTCATTGATTCATCCATTCCTCCTCACATTTCATCCCTTCACCTTCTCCTCCGACCTCCTTCCCTAAAAGACAAGGACACAACAAGCAGCCAGAAGAAGAAGGAAGAAGAAAAAATTGTATCGGATGGCAAAGTGGGTGTCGGATTGGTAAAGACAGGGGAGTTATGCAGATGATGCAGAAGCAGCCAAGCTCAATAATTCTGCAGATGCATTGATCAAGCCACAAAATTACACAATTTCGTAAGCAGAAAACAGGATTTCGGTGTTTTGGGTTTGAAAAAAACAGGGATTCCTGAGTTGGGCATAAGCTATTTATACGCAGGAATTCCTGAGTTGGGCATCAGCCATTTCCACGCAAGGATTCAAGGTAGATAGATGCTCATCTGCCCTACAAATTTTCTTTTTCTATTTTTTCCAAGCTCCCAACTCAGGATTTGAGTGTTTGTGTGTGGATTTCTGTCCCATAAATCCCTGGTGGGGATCCTGTAGTAAGAATAGTATCAGGCAGTCATGGTGTCCACAAGGCGTGGTTCAGCGAACAACAAGCGTACGTCTCCATCTCCGGATCTGCCCGGGCCCAAGCGCTCCAAGTCTGAGGTGCTGCCAGAGGAAGAATCTGTTCGTGGAGACGACTGTGGGAATTCTAAGGAATTGGCATCATCCACTGCCCTCGACGACCACCCGCAACCTGATCTGCACAACGATTCTAGTAATGATGCTGTGATGAACGATATGCCTGGCATTAACAAGTCCAACGAGGTGTCTTCCGAGGTTGAAGGTGCAGAAAAAAATGCGGAAGCGCCCCCATCTTCAGACCCAGAGAAGCCAAAGGGCTCTCCTACGGGCAGTAAGTTGCAAAAGCTAGCATTGAATCTTCAAGCAGCTACCGCCGGACCTTGGGNNNNNGCAAGTTGATATCTCAGTATCCGCAGAATCCAAATGTAGACTTAATTGGCACAGTTTTCACTGTTGGACGGGGCAAAACTTGCAATTTGTGCATAAAGGATCCTTCTATTAGTACAGTTTTGTGCAAGTTGAAGTATACACCGCGTGAAGGTCCTGTAACAATTGTTCTTGAAAGCACAGGCAGCAGTGGGTTTGTTCAAGTCAACGGAAAGCATTTTAGGAAGACTAGTGTTGTAATTAAAGGTGGAGATGAAATTGTTTTCAGCCCTACTGGAAACCATGCCTATATTTTTCAACCTCTAATAAATGAAAATTCGTCAGCTTCAGTTGGACTGACAGAAAATCAAAGAGCCACAGGTAAGGTAGCACCATTTGAATCAAGATCAGGGGATCCTTCAGCTGTAGCAGGAGCATCAATTTTGGCATCTTTGTCAAGTTTGAGGCCAGACCTAAACTTGTTGCCACCACCTGCTGCAAATATTGAAGAGTCCCAACAAGGAATTGATAGGCCTCAGTTGCCACCTTCATGTGAAATGTCAGATGGGTCCGTCTCAGATATTGAAGTAGCTGGTCAGGCGGGAAAATCGACATCCGATCCAAATGGTGCAGCTGATATTCCAATGAGTGACAAAGCACCTGTTATTTTATCTGCAGATATAACAGCAACAAATGAACATCTAAATCTTGACAGCTCGGATGCTGGTCTTGAGACAGATATTGGAAAGTATGGGTTAAATGAATCATTGAGACCTCTTTTAAAATTTCTGTCAGCATCAAACCACTGCGACAACATGGATTTAAGTGGACATATTTTTAAACAATTTTGTGAAGAGAGGAGAGAAAGTGGAAGAGATGTTGACTCGTCCGTCATGTCTGCTAAATGCCAAGCTTTGAAGGAAGATTTACGAAGAGGGATTATTGATGGAAAAGACACTAATGTCTCATTTGATAGCTTCCCGTATTACCTGAGTGAGAACACAAAGAGTGTGCTGATTGCATCAACCTTTATCCATTTGAAGCGTAAAGAATTCACAAAATTTGCAATAGAGCTGCCTACTGTAAGTCCCAGAATATTGTTGTCTGGCCCTGCAGGCTCTGAGATATATCAGGAGATGCTAATAAAGGCTTTAGCGAATCATTTTGATGCAAAATTGCTTATTTTTGATAGCAGTTCAATGCCATTGGGCTCATCAATGAAGGATGCAGAAGTTTTGAAGGAAGGCTTAAGATCTGAAAGTAAATGTGTATGCTTCAAGCAACGCCCAGTACATGGTGATAATTTGCAATCAAAAAGTGGGGCTTCACCAGGCACTGAAGTTGATATAGCATGTTGTTCTCAGCCAAGCACTGCATTAAAGTCACAAGCGCTGCCAAAGCAGGAGACGTCAGGTGCACCTTCCTTTGGAACTGCTTCAAAACGTCACTCCTTTAAGACAGGTGATCGCGTAAAGTATGTTAGCTTTCCTCAAAATTCAGGCTATCCTTCATCTCTCCAACCTCCTTCCAGGGGTCCATCTTATGGCTCTCGAGGGAAAGTGCTGTTGGCGTTTGAAGAGAATGGATCATCTAAACTTGGTGTACGATTTGATAGTCCAATTCCAGAGGGTGTTGACCTTGGTGGGCTATGTGAAGAAGATCATGGTTTCTTCTGTAGTGCAAATGAACTTCGGTTAGAAAGTTCTGCTGCAGAGGATATGGACAAGCTAGTGATCAATGCACTTTTTGAGGTTGTGACGAGCGAAAGTAAGAATGGGCCTCTGATTCTTTTCATGAAAGATGTTGAAAAGTCAATTGTAAGCAATTTAGATTTTCATTCCGCCTTAAAAAGTAAACTCGAGACGCTGGCTGATAGCATTGCAGTTATTGGGTCACACACGCAGGCTGACAGTAGAAAAGAAAAGTCGCATCCTGGGGGTCTTTTGTTCACTAAATTTGGAAGCAATCAAACTGCTCTCCTGGACTTGGCTTTTCCAGATAACTTTGGGAGGTTACATGAACGAAACAAAGAAGCTCCAAAGGCAATGAAGCTTTTGTCTAAACTCTTTCCTAACAAAGTGACTGTGCAGATGCCTCAGGAAGAATCCCTAATCGTTGATTGGAAACATCAATTAGAGCGTGATGTTGAAACACTTAAAGCAAAGGCAAATCTTGCAAGCATTCGCAATGTTCTATCTCGCAATAATTTGGAATGTGATGGCATTGATGCAATTTGCATTAAGGATCAAGCTCTTACGAATGAAGGTGCAGAGAAAATTGTTGGTTGGTCTTTGAGCCACCATCTTATGAATAATTGTGAACCATGTGCCAGAGATGGAAAGCTCGTCATCACTAGTGAAAGTGTTCGTTATGGGCTGAGCATATTACAGGGAATTCAAAATGAGTCACGAGGTTCCAAAAAGTCACTCAAGGATGTTGTAACTGAGAATGAGTTTGAAAAGAGACTTTTGGCTGATGTGATTCCACCAAGCGACATTGGAGTGACATTTGAGGATATCGGAGCTCTGGAGAATGTGAAAGATACACTGAAAGAGTTGGTGATGCTTCCTTTACAAAGGCCTGAGCTATTTTGTAAAGGTCAACTAACAAAGCCTTGCAAGGGTATCCTTCTATTTGGTCCTCCAGGAACCGGGAAAACAATGCTAGCCAAAGCTGTTGCAACGGAAGCCGGTGCCAATTTTATAAATATTTCAATGTCAAGCATTACATCAAAGTGGTTTGGTGAAGGTGAAAAGTATGTCAAAGCGGTATTTTCATTGGCGAGTAAAATTTCACCAAGTGTCATATTTGTTGACGAGGTTGACAGTATGTTGGGTCGAAGGGAGAGTCCTGGAGAACATGAGGCCATGCGTAAGATGAAAAATGAGTTTATGGTAAACTGGGATGGATTGCGCACTAAGGACAAGGAACGAGTACTAGTTCTTGCTGCAACCAATAGACCCTTTGATCTTGATGAAGCTGTCATCCGAAGACTTCCCCGGAGGTTAATGGTGAATTTGCCAGATACAACAAACAGGGCAAAAATCTTGAAGGTGATACTTGCAAAAGAGGAATTGGCACCAGATGTGGATTTGGATGCAATTGCAAGTATGACAGAGGGATATTCTGGGAGTGACCTCAAGAACTTGTGTGTTACAGCTGCATATTGCCCTATCCGAGAAATTCTGGAAAAAGAAAAGAAGGAAAAAGATCAAGCAGCAGCAGATGGCCGACCTCCACCAGCACTGAGTGTCAGCGATGATGTTCGTCGTTTGAATATGACTGACATGCGATATGCTCATGAACAGGTATGTGCTAGTGTTTCTTCAGAGTCAGCAAATATGACAGAGCTACTTCAGTGGAATGATCTGTATGGTGAAGGAGGTTCAAGGCGGAAAAAGGCACTTAGTTATTTTATGTAGGCAAGCTATGTACATAAACAGTAATTACAAATTGGCCTGGACTCTTATTTATTACTTATGGAGGTGGTCCTTTGACAGCCTTTTCAAGTGGAATGTATCCAATACCGAAGTTGCCATCTGCATGCCATGTATAATAGTGTTTTGCTTACTGGTTCTCGGAATTTAGAGTCCGAGCTGATTTTTGGACATTTTCGTAGTGGGCTTAGAAGTATTTTTTGTACAAGGATCTCTACGAAGGCACCTGTGCATTGGTTAATTTGACCTGTGAAGCTATTCCGAAACAAGATGTATATGTGAAATATGCTGATTCTACCGAGAATCTATTGGCGTTAGTGTTTGCAATCCTTCTCATGCCATGCCCCAGGTTCTCTTGGTATTATCTAGTCTCAAATCTTTCTTAAAGCAAACGCTAGTGCTTTACACAAGTATAATAGATGCCATATGAGGATCCATGTTATTTTTACTGACTACAGTTAGTTTATGAATATAGATTACGTGCATGAATTGGTTGATTAATCAGCCATGGTCACATTTGGTTGAGCTTAACTGCCCCGTGAGCCCATTTTATGGTAATAAGACAGTTAGGGTTCATAACTCTTTTCCTTGGATAAGAAGAGTATATTTTATATGACTAATTATATTATGATCTGTTACTGTAATTTTTACAGAGAATTCTATTAATGAATATTTTGTCATATTTTTCCCG

Ace file of the UniGene sp_v3.0_unigene13858

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	AAA-type ATPase family protein [Arabidopsis thaliana] dbj\|BAF01763.1\| hypothetical protein [Arabidopsis thaliana] gb\|AEE82177.1\| AAA-type ATPase family protein [Arabidopsis thaliana]	-	-	0.0	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	57%
Sma3	Katanin p60 ATPase-containing subunit, putative	-	-	3.36e-07	-

Source	ECs	Term	Type	e value	Identity
Sma3	Microtubule-severing ATPase.	EC:3.6.4.3	-	5.28e-26	-

Source	Gene names
Sma3	AT2G34560; AT4g02470; AT4g02480; AT4g24850; AT4g27680; AT4g28000; At1g02890; At2g27600; At2g34560; At2g45500; At3g27130; At4g02470; At4g02480; At4g24850; At4g27680; At4g28000; At5g53540; B1103G11.33; CHLREDRAFT_107085; CHLREDRAFT_113573; CHLREDRAFT_116557

Source	GOs	Term	Type	Identity
Sma3	multivesicular body	GO:0005771	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	cytosol	GO:0005829	Cellular Component	-
Sma3	protein complex	GO:0043234	Cellular Component	-
Sma3	RNA binding	GO:0003723	Molecular Function	-
Sma3	RNA-directed DNA polymerase activity	GO:0003964	Molecular Function	-
Sma3	ATP-dependent peptidase activity	GO:0004176	Molecular Function	-
Sma3	aminopeptidase activity	GO:0004177	Molecular Function	-
Sma3	serine-type endopeptidase activity	GO:0004252	Molecular Function	-
Sma3	helicase activity	GO:0004386	Molecular Function	-
Sma3	thiamine diphosphokinase activity	GO:0004788	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	nucleoside-triphosphatase activity	GO:0017111	Molecular Function	-
Sma3	mismatched DNA binding	GO:0030983	Molecular Function	-
Sma3	RNA-dependent DNA replication	GO:0006278	Biological Process	-
Sma3	mismatch repair	GO:0006298	Biological Process	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	thiamine metabolic process	GO:0006772	Biological Process	-
Sma3	endosome organization	GO:0007032	Biological Process	-
Sma3	thiamine diphosphate biosynthetic process	GO:0009229	Biological Process	-
Sma3	vesicle-mediated transport	GO:0016192	Biological Process	-
Sma3	cell division	GO:0051301	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Forkhead-associated (FHA) domain	IPR000253	-	-
Sma3	Reverse transcriptase	IPR000477	-	-
Sma3	Like-Sm ribonucleoprotein (LSM) domain	IPR001163	-	-
Sma3	Peptidase M18	IPR001948	-	-
Sma3		IPR001984	-	-
Sma3	CDC48, N-terminal subdomain	IPR003338	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ATPase-like, ATP-binding domain	IPR003594	-	-
Sma3	ATPase, AAA-type, core	IPR003959	-	-
Sma3	ATPase, AAA-type, conserved site	IPR003960	-	-
Sma3	CDC48, domain 2	IPR004201	-	-
Sma3	Endonuclease/exonuclease/phosphatase	IPR005135	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	ATPase, AAA-type, CDC48	IPR005938	-	-
Sma3	Thiamin pyrophosphokinase	IPR006282	-	-
Sma3	Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type	IPR006649	-	-
Sma3	MIT	IPR007330	-	-
Sma3	Thiamin pyrophosphokinase, catalytic domain	IPR007371	-	-
Sma3	Thiamin pyrophosphokinase, vitamin B1-binding domain	IPR007373	-	-
Sma3	Aspartate decarboxylase-like fold	IPR009010	-	-
Sma3	DNA mismatch repair protein, C-terminal	IPR013507	-	-
Sma3	Ribosomal protein S5 domain 2-type fold, subgroup	IPR014721	-	-
Sma3	MutL, C-terminal, dimerisation	IPR014790	-	-
Sma3	Vps4 oligomerisation, C-terminal	IPR015415	-	-
Sma3		IPR015706	-	-
Sma3	Peptidase S1/S6, chymotrypsin/Hap, active site	IPR018114	-	-
Sma3	Small acid-soluble spore protein, alpha/beta-type, conserved site	IPR018126	-	-
Sma3	Formate C-acetyltransferase glycine radical, conserved site	IPR019777	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G02480.1	AAA-type ATPase family protein chr4:1082082-1088680 REVERSE LENGTH=1265	57%
RefSeq	Arabidopsis thaliana	NP_567238.2	AAA-type ATPase family protein [Arabidopsis thaliana]	57%
RefSeq	Populus trichocarpa	XP_002321014.1	predicted protein [Populus trichocarpa]	63%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5AE60

Fln msg: your sequence is longer than subject: 955 - 388

Fln protein: MSDGSVSDIEVAGQAGKSTSDPNGAADIPMSDKAPVILSADITATNEHLNLDSSDAGLETDIGKYGLNESLRPLLKFLSASNHCDNMDLSGHIFKQFCEERRESGRDVDSSVMSAKCQALKEDLRRGIIDGKDTNVSFDSFPYYLSENTKSVLIASTFIHLKRKEFTKFAIELPTVSPRILLSGPAGSEIYQEMLIKALANHFDAKLLIFDSSSMPLGSSMKDAEVLKEGLRSESKCVCFKQRPVHGDNLQSKSGASPGTEVDIACCSQPSTALKSQALPKQETSGAPSFGTASKRHSFKTGDRVKYVSFPQNSGYPSSLQPPSRGPSYGSRGKVLLAFEENGSSKLGVRFDSPIPEGVDLGGLCEEDHGFFCSANELRLESSAAEDMDKLVINALFEVVTSESKNGPLILFMKDVEKSIVSNLDFHSALKSKLETLADSIAVIGSHTQADSRKEKSHPGGLLFTKFGSNQTALLDLAFPDNFGRLHERNKEAPKAMKLLSKLFPNKVTVQMPQEESLIVDWKHQLERDVETLKAKANLASIRNVLSRNNLECDGIDAICIKDQALTNEGAEKIVGWSLSHHLMNNCEPCARDGKLVITSESVRYGLSILQGIQNESRGSKKSLKDVVTENEFEKRLLADVIPPSDIGVTFEDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRESPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDTTNRAKILKVILAKEELAPDVDLDAIASMTEGYSGSDLKNLCVTAAYCPIREILEKEKKEKDQAAADGRPPPALSVSDDVRRLNMTDMRYAHEQVCASVSSESANMTELLQWNDLYGEGGSRRKKALSYFM*

Protein Length: 956

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTCCTCTCACTCACCACCCAAAAGATTATTTCATTGATTCATCCATTCCTCCTCACATTTCATCCCTTCACCTTCTCCTCCGACCTCCTTCCCTAAAAGACAAGGACACAACAAGCAGCCAGAAGAAGAAGGAAGAAGAAAAAATTGTATCGGATGGCAAAGTGGGTGTCGGATTGGTAAAGACAGGGGAGTTATGCAGATGATGCAGAAGCAGCCAAGCTCAATAATTCTGCAGATGCATTGATCAAGCCACAAAATTACACAATTTCGTAAGCAGAAAACAGGATTTCGGTGTTTTGGGTTTGAAAAAAACAGGGATTCCTGAGTTGGGCATAAGCTATTTATACGCAGGAATTCCTGAGTTGGGCATCAGCCATTTCCACGCAAGGATTCAAGGTAGATAGATGCTCATCTGCCCTACAAATTTTCTTTTTCTATTTTTTCCAAGCTCCCAACTCAGGATTTGAGTGTTTGTGTGTGGATTTCTGTCCCATAAATCCCTGGTGGGGATCCTGTAGTAAGAATAGTATCAGGCAGTCATGGTGTCCACAAGGCGTGGTTCAGCGAACAACAAGCGTACGTCTCCATCTCCGGATCTGCCCGGGCCCAAGCGCTCCAAGTCTGAGGTGCTGCCAGAGGAAGAATCTGTTCGTGGAGACGACTGTGGGAATTCTAAGGAATTGGCATCATCCACTGCCCTCGACGACCACCCGCAACCTGATCTGCACAACGATTCTAGTAATGATGCTGTGATGAACGATATGCCTGGCATTAACAAGTCCAACGAGGTGTCTTCCGAGGTTGAAGGTGCAGAAAAAAATGCGGAAGCGCCCCCATCTTCAGACCCAGAGAAGCCAAAGGGCTCTCCTACGGGCAGTAAGTTGCAAAAGCTAGCATTGAATCTTCAAGCAGCTACCGCCGGACCTTGGGactgaGCAAGTTGATATCTCAGTATCCGCAGAATCCAAATGTAGACTTAATTGGCACAGTTTTCACTGTTGGACGGGGCAAAACTTGCAATTTGTGCATAAAGGATCCTTCTATTAGTACAGTTTTGTGCAAGTTGAAGTATACACCGCGTGAAGGTCCTGTAACAATTGTTCTTGAAAGCACAGGCAGCAGTGGGTTTGTTCAAGTCAACGGAAAGCATTTTAGGAAGACTAGTGTTGTAATTAAAGGTGGAGATGAAATTGTTTTCAGCCCTACTGGAAACCATGCCTATATTTTTCAACCTCTAATAAATGAAAATTCGTCAGCTTCAGTTGGACTGACAGAAAATCAAAGAGCCACAGGTAAGGTAGCACCATTTGAATCAAGATCAGGGGATCCTTCAGCTGTAGCAGGAGCATCAATTTTGGCATCTTTGTCAAGTTTGAGGCCAGACCTAAACTTGTTGCCACCACCTGCTGCAAATATTGAAGAGTCCCAACAAGGAATTGATAGGCCTCAGTTGCCACCTTCATGTGAA_-_ATGTCAGATGGGTCCGTCTCAGATATTGAAGTAGCTGGTCAGGCGGGAAAATCGACATCCGATCCAAATGGTGCAGCTGATATTCCAATGAGTGACAAAGCACCTGTTATTTTATCTGCAGATATAACAGCAACAAATGAACATCTAAATCTTGACAGCTCGGATGCTGGTCTTGAGACAGATATTGGAAAGTATGGGTTAAATGAATCATTGAGACCTCTTTTAAAATTTCTGTCAGCATCAAACCACTGCGACAACATGGATTTAAGTGGACATATTTTTAAACAATTTTGTGAAGAGAGGAGAGAAAGTGGAAGAGATGTTGACTCGTCCGTCATGTCTGCTAAATGCCAAGCTTTGAAGGAAGATTTACGAAGAGGGATTATTGATGGAAAAGACACTAATGTCTCATTTGATAGCTTCCCGTATTACCTGAGTGAGAACACAAAGAGTGTGCTGATTGCATCAACCTTTATCCATTTGAAGCGTAAAGAATTCACAAAATTTGCAATAGAGCTGCCTACTGTAAGTCCCAGAATATTGTTGTCTGGCCCTGCAGGCTCTGAGATATATCAGGAGATGCTAATAAAGGCTTTAGCGAATCATTTTGATGCAAAATTGCTTATTTTTGATAGCAGTTCAATGCCATTGGGCTCATCAATGAAGGATGCAGAAGTTTTGAAGGAAGGCTTAAGATCTGAAAGTAAATGTGTATGCTTCAAGCAACGCCCAGTACATGGTGATAATTTGCAATCAAAAAGTGGGGCTTCACCAGGCACTGAAGTTGATATAGCATGTTGTTCTCAGCCAAGCACTGCATTAAAGTCACAAGCGCTGCCAAAGCAGGAGACGTCAGGTGCACCTTCCTTTGGAACTGCTTCAAAACGTCACTCCTTTAAGACAGGTGATCGCGTAAAGTATGTTAGCTTTCCTCAAAATTCAGGCTATCCTTCATCTCTCCAACCTCCTTCCAGGGGTCCATCTTATGGCTCTCGAGGGAAAGTGCTGTTGGCGTTTGAAGAGAATGGATCATCTAAACTTGGTGTACGATTTGATAGTCCAATTCCAGAGGGTGTTGACCTTGGTGGGCTATGTGAAGAAGATCATGGTTTCTTCTGTAGTGCAAATGAACTTCGGTTAGAAAGTTCTGCTGCAGAGGATATGGACAAGCTAGTGATCAATGCACTTTTTGAGGTTGTGACGAGCGAAAGTAAGAATGGGCCTCTGATTCTTTTCATGAAAGATGTTGAAAAGTCAATTGTAAGCAATTTAGATTTTCATTCCGCCTTAAAAAGTAAACTCGAGACGCTGGCTGATAGCATTGCAGTTATTGGGTCACACACGCAGGCTGACAGTAGAAAAGAAAAGTCGCATCCTGGGGGTCTTTTGTTCACTAAATTTGGAAGCAATCAAACTGCTCTCCTGGACTTGGCTTTTCCAGATAACTTTGGGAGGTTACATGAACGAAACAAAGAAGCTCCAAAGGCAATGAAGCTTTTGTCTAAACTCTTTCCTAACAAAGTGACTGTGCAGATGCCTCAGGAAGAATCCCTAATCGTTGATTGGAAACATCAATTAGAGCGTGATGTTGAAACACTTAAAGCAAAGGCAAATCTTGCAAGCATTCGCAATGTTCTATCTCGCAATAATTTGGAATGTGATGGCATTGATGCAATTTGCATTAAGGATCAAGCTCTTACGAATGAAGGTGCAGAGAAAATTGTTGGTTGGTCTTTGAGCCACCATCTTATGAATAATTGTGAACCATGTGCCAGAGATGGAAAGCTCGTCATCACTAGTGAAAGTGTTCGTTATGGGCTGAGCATATTACAGGGAATTCAAAATGAGTCACGAGGTTCCAAAAAGTCACTCAAGGATGTTGTAACTGAGAATGAGTTTGAAAAGAGACTTTTGGCTGATGTGATTCCACCAAGCGACATTGGAGTGACATTTGAGGATATCGGAGCTCTGGAGAATGTGAAAGATACACTGAAAGAGTTGGTGATGCTTCCTTTACAAAGGCCTGAGCTATTTTGTAAAGGTCAACTAACAAAGCCTTGCAAGGGTATCCTTCTATTTGGTCCTCCAGGAACCGGGAAAACAATGCTAGCCAAAGCTGTTGCAACGGAAGCCGGTGCCAATTTTATAAATATTTCAATGTCAAGCATTACATCAAAGTGGTTTGGTGAAGGTGAAAAGTATGTCAAAGCGGTATTTTCATTGGCGAGTAAAATTTCACCAAGTGTCATATTTGTTGACGAGGTTGACAGTATGTTGGGTCGAAGGGAGAGTCCTGGAGAACATGAGGCCATGCGTAAGATGAAAAATGAGTTTATGGTAAACTGGGATGGATTGCGCACTAAGGACAAGGAACGAGTACTAGTTCTTGCTGCAACCAATAGACCCTTTGATCTTGATGAAGCTGTCATCCGAAGACTTCCCCGGAGGTTAATGGTGAATTTGCCAGATACAACAAACAGGGCAAAAATCTTGAAGGTGATACTTGCAAAAGAGGAATTGGCACCAGATGTGGATTTGGATGCAATTGCAAGTATGACAGAGGGATATTCTGGGAGTGACCTCAAGAACTTGTGTGTTACAGCTGCATATTGCCCTATCCGAGAAATTCTGGAAAAAGAAAAGAAGGAAAAAGATCAAGCAGCAGCAGATGGCCGACCTCCACCAGCACTGAGTGTCAGCGATGATGTTCGTCGTTTGAATATGACTGACATGCGATATGCTCATGAACAGGTATGTGCTAGTGTTTCTTCAGAGTCAGCAAATATGACAGAGCTACTTCAGTGGAATGATCTGTATGGTGAAGGAGGTTCAAGGCGGAAAAAGGCACTTAGTTATTTTATGTAG___GCAAGCTATGTACATAAACAGTAATTACAAATTGGCCTGGACTCTTATTTATTACTTATGGAGGTGGTCCTTTGACAGCCTTTTCAAGTGGAATGTATCCAATACCGAAGTTGCCATCTGCATGCCATGTATAATAGTGTTTTGCTTACTGGTTCTCGGAATTTAGAGTCCGAGCTGATTTTTGGACATTTTCGTAGTGGGCTTAGAAGTATTTTTTGTACAAGGATCTCTACGAAGGCACCTGTGCATTGGTTAATTTGACCTGTGAAGCTATTCCGAAACAAGATGTATATGTGAAATATGCTGATTCTACCGAGAATCTATTGGCGTTAGTGTTTGCAATCCTTCTCATGCCATGCCCCAGGTTCTCTTGGTATTATCTAGTCTCAAATCTTTCTTAAAGCAAACGCTAGTGCTTTACACAAGTATAATAGATGCCATATGAGGATCCATGTTATTTTTACTGACTACAGTTAGTTTATGAATATAGATTACGTGCATGAATTGGTTGATTAATCAGCCATGGTCACATTTGGTTGAGCTTAACTGCCCCGTGAGCCCATTTTATGGTAATAAGACAGTTAGGGTTCATAACTCTTTTCCTTGGATAAGAAGAGTATATTTTATATGACTAATTATATTATGATCTGTTACTGTAATTTTTACAGAGAATTCTATTAATGAATATTTTGTCATATTTTTCCCG

Fln Alignment:

Contig13858___SKKSLKDVVTENEFEKRLLADVIPPSDIGVTFEDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRESPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDTTNRAKILKVILAKEELAPDVDLDAIASMTEGYSGSDLKNLCVTAAYCPIREIL
D5AE60_______________SKRFGRPRVLTNPYEDVIACDVINPDDIDVTFDSIGGLEKVKQELYELVILPLQRPNLFGHCKLLSPPKGVLLYGPPGTGKTLLAKAIARESGAVFINVRVANLMSKWFGDSQKLVTAVFTLAQKLQPAIIFLDEVDSFLGQRRS-SEQEAFTNMKTEFMALWDGFTTDQTARVTVLAATNRPEELDEAILRRLPRVFEVGMPSCIQRAKILEVILKGENVEDDIDYDYIASLCEGYSGSDLTDLCKQAAYFPIRELL

SNPs (tot: 68)

Position	A %	C %	G %	T %	Probability
60			25	75	0.996473
680	33		66		0.997452
3190	18		81		0.999994
3684	85		14		0.999981
4267	88		11		0.999952
4728	40		60		1.0
4731	40			60	1.0
4733	60		40		1.0
4734	40			60	1.0
4735		60		40	1.0
4737	60			40	1.0
4738			60	40	1.0
4740		60		40	1.0
4742		60	40		1.0
4743	60		40		1.0
4744	60			40	1.0
4745	60		40		1.0
4747		60	40		1.0
4748	40			60	1.0
4752	40			60	1.0
4757	20		80		0.999996
4758		80		20	0.999996
4760	80			20	0.999996
4761	80			20	0.999996
4762		80	20		0.999996
4763			80	20	0.999996
4765	20			80	0.999996
4766	80		20		0.999996
4772		80	20		0.999996
4774		20		80	0.999996
4775	20			80	0.999996
4776	80		20		0.999996
4779		80	20		0.999996
4780	80	20			0.999996
4784	80		20		0.999996
4785			20	80	0.999996
4786	80			20	0.999996
4787	80			20	0.999996
4791	80			20	0.999996
4792			20	80	0.999996
4794		80		20	0.999996
4795		80		20	0.999996
4798			20	80	0.999996
4802	80		20		0.999996
4803	20		80		0.999996
4804			80	20	0.999996
4805	80		20		0.999996
4807		80		20	0.999996
4808		80	20		0.999996
4810		20		80	0.999996
4811		20	80		0.999996
4813	22			77	0.999999
4814	77		22		0.999999
4815			25	75	1.0
4818		28		71	1.0
4819	28			71	1.0
4821	28	71			1.0
4823			71	28	1.0
4824	71	28			1.0
4826			28	71	1.0
4828		66		33	1.0
4829	33		66		0.997452
4830			66	33	0.997452
4833	66			33	0.997452
4834			66	33	0.997452
4840			66	33	0.997452
4844	33	66			0.997452
4846	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain