SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene13839

Length: 4600 nt

UniGene Fasta

>sp_v3.0_unigene13839
ATGTGGGTGTGGCGCTTGTCTTCACAGCTCCAGCGCTCTTTTTCATTGCGTATTCTTTCGCGGGGCAACGTCGTTAGTGGCAGATTCGCGGTAGTTGAACGAGAGATTTTGGTTTTTAATTGTGCCAGAAAGCTCAGACTTAGGCTAGATCCGTGCCGGACGTCTGAGCAATTTGAAAAGCCTCAAAGAAGGGTTTGTTTCTGTTGCCAATATGCCAAATAAAAGGAAAAATGGAACATGATGATGTCAATATTACAGTATCCTTGAATACTGAGGCAGGTTCTGGCTCACATCTCAACGTGGCTTCAAAGAATAAAAATATGGAAAAAACTGAGGATAAGAAGGGGAAAGAAGACACCAAGAATACTGTTCCGTTTTACAAGTTATTTGACTTAGCAGACTCCCTGGATATTACATTGATGAGTATTGGTACTTTTGCATCCGTTGCCAATGGGCTTGCATTTCCAATTATGACCGTCTTGTTCGGGAGTCTCACGAATGCATTCGGACAGAATACAGACGTCCATAGTTTGGTACACAAAGTGTCCAAGGTATCTTTGAATTTTATTTATCTAGCTGCTGGTACGGCAGTTGCTTCTTTCTTTCAGGTGGCTTTTTGGATGTGCACAGGGGAAAGGCAGGCTGCTCGTATCAGGAGTTTCTACTTAAAAACTATTCTAAGGCAGGATATTGCATTTTTTGACAGCGAGACATCAACAGGAGAGGTTATTGGAAGGATGTCAGGAGACACTGTACTAATTCAAGATGCTATGGGTGAAAAGGTTGGAAAATTCATCCAGCTCATGTCCACGTTCATTGGAGGTTTTGTTGTCGCTTTCATCAAAGGATGGAAACTGACCCTTGTAATGCTATGTGTGATTCCCCTTCTTGTACTGGCGGGTGGTGCTATGGCTATGATAATATCAAAGATGTCAAGCCGAGGCCAGCAAGCATATGCAGAAGCAGGCAATGTTGTGGAGCAGACAATTGGTTCAATCAGGACGGTTGCATCTTTTACCGGGGAGAAGAAAGCTGTGACTGACTATGAAAAGTTCCTTACGGTTGCTTACAAGGCTGCTGCTCATCAAGGGTTGGCATCTGGTTTTGGTCTTGGAACTCTCCTGTTTATTATGTTCTGCAGCTATGCATTGGCTCTTTGGTATGGATCACAGTTAATTATTCACGAAGGGTATTCCGGTGGCAGTGTGATTAATGTCATCTTTGCAGTTCTGACTGGAGGCATGTCTTTGGGCCAGGCATCACCTTGTTTAAATGCCTTTGGAGCTGGACAAGCTGCAGCTTACAAAATGTTCGAGGCAATTGATAGGAAGCCAGAGATTGATGTATATGATACAAATGGATTAGTACTTGAGGATATTCAAGGTGATATTGAGCTTAAAGATGTACATTTTGCATATCCAGCACGGCCTGATGTTCAAATATTTTCTGGGTTCTCATTGGAAATACCCAGCGGCACCACTGCAGCTTTAGTTGGGGAGAGTGGAAGTGGAAAGTCCACAGTTATAAGTCTTATAGAGAGATTCTATGATCCACAAGCTGGTGAAGTACTTATAGACAGTGTCAATATCAAACAATTCCAACTTAAGTGGATCAGGCAAAAAATTGGACTTGTAAGCCAGGAACCTGCTCTCTTTGCAACCACTATTAAGGAGAATATTGCATATGGTAAAGATGGGGCAACACAAGAAGAAATACAGGCTGCTGCAGAGCTTGCTAATGCTGCAAAATTTATTGCCAAGATGCCTCAGGGTTTTGATACAATGGTTGGCGAGCATGGTACCCAATTATCTGGAGGCCAAAAGCAAAGGATTGCAATTGCCAGGGCTATTTTAAAAGATCCCCGAATTCTGCTCCTCGATGAAGCTACTAGTGCCTTAGATGCAGAGTCTGAAAGAGTGGTTCAAGAAGCTCTCGATAGAATTATGTTAAATAGAACAACAGTTATTGTTGCACATCGTCTGACTACTGTCAGAAATGCTGATATGATTGCTGTGGTCCAGCGTGGTTCTATTGTGGAAAAGGGTTCACACTCTGAGCTCATCATGAACCCTTCTGGGGCATACTCCCAACTTATAAGTCTGCAGGAAATGCGTCAAACAAAAGAACAATATGCAAATGATCCTGATCATCTGGAAATTCATTTGGATGATGCCAATACCATTGGCAGGGTTAGTAGTCAAAAGTTATCTTTTAGACGGTCTATAAGCAATGGATCATCCGGACTTGGTGGTAGTCGTAACTCTGTTTCATTTTCATTTTCCTTGCCTGGAGGAGTTAGTCTCCAGGAAGACGTTCAAGTAGACAAAGGCAGGCCAAAAAAAGGCTTCATGAGTTGGTTTTCATCCAAAAATCAGGGAGATGTGGAGCAAGGTCAGTCAAAACATAAAAAAAATGTTCCTGTATTACGCCTAGCATCTCTCAACAAGCCAGAGATTCCAGTGTTTATAGTGGGATCCATTGCGGCATGTGTTCATGGGGTTACATTTCCTATTTTTGGTCTTTTGCTTTCAAGTGTTATTGCCAGTTTCTATGAACCTCCACATAAACTTCGAAAAGATGCCAGTTTCTGGGCACTTATGTATATCGTTTTGGCAACAACATGCCTCGTCATGGCACCAACACAGATGTACAGTTTTGCTGTTGCGGGTGGCAGGCTTGTGCGACGTATTCGATCATTGACGTTTAGCAAAGTTGTTTACCAGGAGATTGGATGGTTTGATGATAGTGAAAATTCAAGTGGTGCAATAGGTGCAAGATTATCAACAGATGCTGCCACTGTACGTAGCATGGTGGGAGATGCTTTGTCACTTGTTGTGCAGAATATTTCAACGATCCTTGCTGGTGTTCTTATAGCTTTTTCAGCGAACTGGAAGTTGGCATTTTTGATATTGGGTCTTCTGCCTCTGCTAGGTCTTCAAGGTTGGGTTCAAGTGAAGTTCATGCAGGGCTTTTCTGGTGATTCAAAGGTGATGTATGAGGAAGCCAGTCAGGTTGCAAATGATGCTGTTGGAAGCATTCGCACTGTTGCCTCCTTTTCTGCAGAGGACAAGGTGATGAGCCTCTACAATGAAAAATGCTCTGTTCCCTTGAAAGGTGGAATTCGGCAAGGAATTATAAGTGGACTTGGTCTTGGAATAGCAAATTTCCTATTGTTTTCAGTATATGCAGTTAGCTTTTGGGTAGGCGCTCGGATGGTTGAACATGGGGAAACAACCTTCCGCAAAGTTTTCAGGGTCTTTTTCGCTCTCACAATGGCTGCCATGGGGGTTTCTCAGTCAGCAGGCCTGGCCCCCGATATTGCAAAAGTAAAATCATCTGTCAATTCAGTGTTTGAAATACTTGATCGGAAATCCAAAATTGATGCAAGTGATGTCTCAGGGACTACCTTAGAAAATGTAAAAGGCGACATTGAGTTTCGCCATGTTAGCTTTAAATATGCTACTCGCCCAGACATACAAATTTTCCGCGATTTAAGCCTTTCTGTCCATTCTGGAAAGACTGTTGCTCTTGTGGGAGAAAGTGGAAGTGGAAAATCAACTGTCATTTCACTTTTGGAACGATTCTATGATCCTGACTCAGGCCGCATATTACTTGATGGCGTTGAAATCCAAAAACTGCAACTTAAATGGTTGAGGCAACAAATGGGCTTGGTTAGCCAGGAGCCTATTTTGTTTAATGATTCAATTCGTGCAAATATTGCTTATGGAAAGGAGGGAATTGTTTCTGATGAACAGATTATAATAGCTGCTGAGGCTTCCAATGCTCATAAGTTCATCTCAAGGCTTCCCCAAGGATATGACACATCTGTGGGGGAGCGGGGCGTGCAGTTATCTGGAGGACAGAAGCAGCGGATAGCAATTGCAAGAGCAATAATTAAAGACCCTAGCATACTATTGTTAGATGAAGCTACAAGTGCATTGGATGCTGAATCTGAGCGTGTTGTTCAAGATGCGTTGGATCGTGTAATGGTAAACAGGACCACTATTGTTGTTGCTCATCGTCTTTCAACAATTAAAGATGCAGATCTCATAGCTGTGGTGAAGAATGGCGTCATTGCAGAACAGGGAAAACATGATCAATTGCTTGACATTAGAGATGGTGCCTATGCATCCTTGGTGAAACTGCATATGGCTTCCTCTTAGTTGAGAAAAAAAAATACTGAAAAGGTCTCTTCGGTGCATTTAATCCATATGACTAGCTTATGTATTAACAGGCAATTCCAGAGTGCAAAAGTGTAATTGTGTAATTTGTTGCAACCTTTATTACACGCGATTAAACAAAATCACAAAAAAAAAGAGTTTTTATGATGCCAGATTGATTACCATGTAACAACAAAGCCAAGCAGATAAATAACCCCGACTTCTCTGCATCAGTAACTAGCACCTTGTAACTATTGGAATACAGCTTAGTTTCTTCTGTGCCTTTCGTTGTTGAATAATATATTTGAGGTTCAGAGTCCGTATGCACATTTGAACTGCTTCCTTGAAGTCTGCTACTGCCTTCCTCTAGCAAGTACAGTTTTCTTCTTAAAGATTGTACGATATAACATTTATTTCATTTAAACACCAAAATTAAGCTT

Ace file of the UniGene sp_v3.0_unigene13839

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU	-	-	0.0	72%
FL-Next	tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew).	-	-	0.0	77%
Sma3	Multidrug resistance protein 1, 2, putative	-	-	6.97e-34	-

Source	ECs	Term	Type	e value	Identity
Sma3	Phosphate-transporting ATPase.	EC:3.6.3.27	-	1.718e-15	-
Sma3	Xenobiotic-transporting ATPase.	EC:3.6.3.44	-	2.072e-27	-

Source	Gene names
Sma3	At1g02520; At1g02530; At2g36910; At2g47000; At3g28344; At3g28860; At3g55320; At3g62150; At4g01820; At4g01830; At4g18050; At4g25960; At5g46540; CMDR1; Cjmdr1; F14M4.17; F15J5.20; F20B18.70; GSVIVT00003365001; GSVIVT00003368001; GSVIVT00003375001; GSVIVT000

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	RNA binding	GO:0003723	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	xenobiotic-transporting ATPase activity	GO:0008559	Molecular Function	-
Sma3	auxin efflux transmembrane transporter activity	GO:0010329	Molecular Function	-
Sma3	ATPase activity	GO:0016887	Molecular Function	-
Sma3	ATPase activity, coupled to transmembrane movement of substances	GO:0042626	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-
Sma3	regulation of cell size	GO:0008361	Biological Process	-
Sma3	response to nematode	GO:0009624	Biological Process	-
Sma3	gravitropism	GO:0009630	Biological Process	-
Sma3	response to blue light	GO:0009637	Biological Process	-
Sma3	photomorphogenesis	GO:0009640	Biological Process	-
Sma3	auxin mediated signaling pathway	GO:0009734	Biological Process	-
Sma3	response to cytokinin stimulus	GO:0009735	Biological Process	-
Sma3	auxin polar transport	GO:0009926	Biological Process	-
Sma3	positive gravitropism	GO:0009958	Biological Process	-
Sma3	auxin efflux	GO:0010315	Biological Process	-
Sma3	basipetal auxin transport	GO:0010540	Biological Process	-
Sma3	anthocyanin accumulation in tissues in response to UV light	GO:0043481	Biological Process	-
Sma3	stamen development	GO:0048443	Biological Process	-
Sma3	root hair elongation	GO:0048767	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ABC transporter, transmembrane domain	IPR001140	-	-
Sma3	F-box domain, cyclin-like	IPR001810	-	-
Sma3	Ribosomal protein L10, eubacterial, conserved site	IPR002363	-	-
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	K Homology domain, type 1	IPR004088	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Leucine-rich repeat 2	IPR013101	-	-
Sma3		IPR013596	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	ABC transporter, integral membrane type 1	IPR017940	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G47000.1	MDR4, PGP4, ABCB4, ATPGP4 ATP binding cassette subfamily B4 chr2:19310008-19314750 REVERSE LENGTH=1286	66%
RefSeq	Arabidopsis thaliana	NP_182223.1	ABC transporter B family member 4 [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002320942.1	multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa]	68%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: E6Y0T0

Fln msg:

Fln protein: MEHDDVNITVSLNTEAGSGSHLNVASKNKNMEKTEDKKGKEDTKNTVPFYKLFDLADSLDITLMSIGTFASVANGLAFPIMTVLFGSLTNAFGQNTDVHSLVHKVSKVSLNFIYLAAGTAVASFFQVAFWMCTGERQAARIRSFYLKTILRQDIAFFDSETSTGEVIGRMSGDTVLIQDAMGEKVGKFIQLMSTFIGGFVVAFIKGWKLTLVMLCVIPLLVLAGGAMAMIISKMSSRGQQAYAEAGNVVEQTIGSIRTVASFTGEKKAVTDYEKFLTVAYKAAAHQGLASGFGLGTLLFIMFCSYALALWYGSQLIIHEGYSGGSVINVIFAVLTGGMSLGQASPCLNAFGAGQAAAYKMFEAIDRKPEIDVYDTNGLVLEDIQGDIELKDVHFAYPARPDVQIFSGFSLEIPSGTTAALVGESGSGKSTVISLIERFYDPQAGEVLIDSVNIKQFQLKWIRQKIGLVSQEPALFATTIKENIAYGKDGATQEEIQAAAELANAAKFIAKMPQGFDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRIMLNRTTVIVAHRLTTVRNADMIAVVQRGSIVEKGSHSELIMNPSGAYSQLISLQEMRQTKEQYANDPDHLEIHLDDANTIGRVSSQKLSFRRSISNGSSGLGGSRNSVSFSFSLPGGVSLQEDVQVDKGRPKKGFMSWFSSKNQGDVEQGQSKHKKNVPVLRLASLNKPEIPVFIVGSIAACVHGVTFPIFGLLLSSVIASFYEPPHKLRKDASFWALMYIVLATTCLVMAPTQMYSFAVAGGRLVRRIRSLTFSKVVYQEIGWFDDSENSSGAIGARLSTDAATVRSMVGDALSLVVQNISTILAGVLIAFSANWKLAFLILGLLPLLGLQGWVQVKFMQGFSGDSKVMYEEASQVANDAVGSIRTVASFSAEDKVMSLYNEKCSVPLKGGIRQGIISGLGLGIANFLLFSVYAVSFWVGARMVEHGETTFRKVFRVFFALTMAAMGVSQSAGLAPDIAKVKSSVNSVFEILDRKSKIDASDVSGTTLENVKGDIEFRHVSFKYATRPDIQIFRDLSLSVHSGKTVALVGESGSGKSTVISLLERFYDPDSGRILLDGVEIQKLQLKWLRQQMGLVSQEPILFNDSIRANIAYGKEGIVSDEQIIIAAEASNAHKFISRLPQGYDTSVGERGVQLSGGQKQRIAIARAIIKDPSILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKDADLIAVVKNGVIAEQGKHDQLLDIRDGAYASLVKLHMASS*

Protein Length: 1312

Fln nts: ATGTGGGTGTGGCGCTTGTCTTCACAGCTCCAGCGCTCTTTTTCATTGCGTATTCTTTCGCGGGGCAACGTCGTTAGTGGCAGATTCGCGGTAGTTGAACGAGAGATTTTGGTTTTTAATTGTGCCAGAAAGCTCAGACTTAGGCTAGATCCGTGCCGGACGTCTGAGCAATTTGAAAAGCCTCAAAGAAGGGTTTGTTTCTGTTGCCAATATGCCAAATAAAAGGAAAA_-_ATGGAACATGATGATGTCAATATTACAGTATCCTTGAATACTGAGGCAGGTTCTGGCTCACATCTCAACGTGGCTTCAAAGAATAAAAATATGGAAAAAACTGAGGATAAGAAGGGGAAAGAAGACACCAAGAATACTGTTCCGTTTTACAAGTTATTTGACTTAGCAGACTCCCTGGATATTACATTGATGAGTATTGGTACTTTTGCATCCGTTGCCAATGGGCTTGCATTTCCAATTATGACCGTCTTGTTCGGGAGTCTCACGAATGCATTCGGACAGAATACAGACGTCCATAGTTTGGTACACAAAGTGTCCAAGGTATCTTTGAATTTTATTTATCTAGCTGCTGGTACGGCAGTTGCTTCTTTCTTTCAGGTGGCTTTTTGGATGTGCACAGGGGAAAGGCAGGCTGCTCGTATCAGGAGTTTCTACTTAAAAACTATTCTAAGGCAGGATATTGCATTTTTTGACAGCGAGACATCAACAGGAGAGGTTATTGGAAGGATGTCAGGAGACACTGTACTAATTCAAGATGCTATGGGTGAAAAGGTTGGAAAATTCATCCAGCTCATGTCCACGTTCATTGGAGGTTTTGTTGTCGCTTTCATCAAAGGATGGAAACTGACCCTTGTAATGCTATGTGTGATTCCCCTTCTTGTACTGGCGGGTGGTGCTATGGCTATGATAATATCAAAGATGTCAAGCCGAGGCCAGCAAGCATATGCAGAAGCAGGCAATGTTGTGGAGCAGACAATTGGTTCAATCAGGACGGTTGCATCTTTTACCGGGGAGAAGAAAGCTGTGACTGACTATGAAAAGTTCCTTACGGTTGCTTACAAGGCTGCTGCTCATCAAGGGTTGGCATCTGGTTTTGGTCTTGGAACTCTCCTGTTTATTATGTTCTGCAGCTATGCATTGGCTCTTTGGTATGGATCACAGTTAATTATTCACGAAGGGTATTCCGGTGGCAGTGTGATTAATGTCATCTTTGCAGTTCTGACTGGAGGCATGTCTTTGGGCCAGGCATCACCTTGTTTAAATGCCTTTGGAGCTGGACAAGCTGCAGCTTACAAAATGTTCGAGGCAATTGATAGGAAGCCAGAGATTGATGTATATGATACAAATGGATTAGTACTTGAGGATATTCAAGGTGATATTGAGCTTAAAGATGTACATTTTGCATATCCAGCACGGCCTGATGTTCAAATATTTTCTGGGTTCTCATTGGAAATACCCAGCGGCACCACTGCAGCTTTAGTTGGGGAGAGTGGAAGTGGAAAGTCCACAGTTATAAGTCTTATAGAGAGATTCTATGATCCACAAGCTGGTGAAGTACTTATAGACAGTGTCAATATCAAACAATTCCAACTTAAGTGGATCAGGCAAAAAATTGGACTTGTAAGCCAGGAACCTGCTCTCTTTGCAACCACTATTAAGGAGAATATTGCATATGGTAAAGATGGGGCAACACAAGAAGAAATACAGGCTGCTGCAGAGCTTGCTAATGCTGCAAAATTTATTGCCAAGATGCCTCAGGGTTTTGATACAATGGTTGGCGAGCATGGTACCCAATTATCTGGAGGCCAAAAGCAAAGGATTGCAATTGCCAGGGCTATTTTAAAAGATCCCCGAATTCTGCTCCTCGATGAAGCTACTAGTGCCTTAGATGCAGAGTCTGAAAGAGTGGTTCAAGAAGCTCTCGATAGAATTATGTTAAATAGAACAACAGTTATTGTTGCACATCGTCTGACTACTGTCAGAAATGCTGATATGATTGCTGTGGTCCAGCGTGGTTCTATTGTGGAAAAGGGTTCACACTCTGAGCTCATCATGAACCCTTCTGGGGCATACTCCCAACTTATAAGTCTGCAGGAAATGCGTCAAACAAAAGAACAATATGCAAATGATCCTGATCATCTGGAAATTCATTTGGATGATGCCAATACCATTGGCAGGGTTAGTAGTCAAAAGTTATCTTTTAGACGGTCTATAAGCAATGGATCATCCGGACTTGGTGGTAGTCGTAACTCTGTTTCATTTTCATTTTCCTTGCCTGGAGGAGTTAGTCTCCAGGAAGACGTTCAAGTAGACAAAGGCAGGCCAAAAAAAGGCTTCATGAGTTGGTTTTCATCCAAAAATCAGGGAGATGTGGAGCAAGGTCAGTCAAAACATAAAAAAAATGTTCCTGTATTACGCCTAGCATCTCTCAACAAGCCAGAGATTCCAGTGTTTATAGTGGGATCCATTGCGGCATGTGTTCATGGGGTTACATTTCCTATTTTTGGTCTTTTGCTTTCAAGTGTTATTGCCAGTTTCTATGAACCTCCACATAAACTTCGAAAAGATGCCAGTTTCTGGGCACTTATGTATATCGTTTTGGCAACAACATGCCTCGTCATGGCACCAACACAGATGTACAGTTTTGCTGTTGCGGGTGGCAGGCTTGTGCGACGTATTCGATCATTGACGTTTAGCAAAGTTGTTTACCAGGAGATTGGATGGTTTGATGATAGTGAAAATTCAAGTGGTGCAATAGGTGCAAGATTATCAACAGATGCTGCCACTGTACGTAGCATGGTGGGAGATGCTTTGTCACTTGTTGTGCAGAATATTTCAACGATCCTTGCTGGTGTTCTTATAGCTTTTTCAGCGAACTGGAAGTTGGCATTTTTGATATTGGGTCTTCTGCCTCTGCTAGGTCTTCAAGGTTGGGTTCAAGTGAAGTTCATGCAGGGCTTTTCTGGTGATTCAAAGGTGATGTATGAGGAAGCCAGTCAGGTTGCAAATGATGCTGTTGGAAGCATTCGCACTGTTGCCTCCTTTTCTGCAGAGGACAAGGTGATGAGCCTCTACAATGAAAAATGCTCTGTTCCCTTGAAAGGTGGAATTCGGCAAGGAATTATAAGTGGACTTGGTCTTGGAATAGCAAATTTCCTATTGTTTTCAGTATATGCAGTTAGCTTTTGGGTAGGCGCTCGGATGGTTGAACATGGGGAAACAACCTTCCGCAAAGTTTTCAGGGTCTTTTTCGCTCTCACAATGGCTGCCATGGGGGTTTCTCAGTCAGCAGGCCTGGCCCCCGATATTGCAAAAGTAAAATCATCTGTCAATTCAGTGTTTGAAATACTTGATCGGAAATCCAAAATTGATGCAAGTGATGTCTCAGGGACTACCTTAGAAAATGTAAAAGGCGACATTGAGTTTCGCCATGTTAGCTTTAAATATGCTACTCGCCCAGACATACAAATTTTCCGCGATTTAAGCCTTTCTGTCCATTCTGGAAAGACTGTTGCTCTTGTGGGAGAAAGTGGAAGTGGAAAATCAACTGTCATTTCACTTTTGGAACGATTCTATGATCCTGACTCAGGCCGCATATTACTTGATGGCGTTGAAATCCAAAAACTGCAACTTAAATGGTTGAGGCAACAAATGGGCTTGGTTAGCCAGGAGCCTATTTTGTTTAATGATTCAATTCGTGCAAATATTGCTTATGGAAAGGAGGGAATTGTTTCTGATGAACAGATTATAATAGCTGCTGAGGCTTCCAATGCTCATAAGTTCATCTCAAGGCTTCCCCAAGGATATGACACATCTGTGGGGGAGCGGGGCGTGCAGTTATCTGGAGGACAGAAGCAGCGGATAGCAATTGCAAGAGCAATAATTAAAGACCCTAGCATACTATTGTTAGATGAAGCTACAAGTGCATTGGATGCTGAATCTGAGCGTGTTGTTCAAGATGCGTTGGATCGTGTAATGGTAAACAGGACCACTATTGTTGTTGCTCATCGTCTTTCAACAATTAAAGATGCAGATCTCATAGCTGTGGTGAAGAATGGCGTCATTGCAGAACAGGGAAAACATGATCAATTGCTTGACATTAGAGATGGTGCCTATGCATCCTTGGTGAAACTGCATATGGCTTCCTCTTAG___TTGAGAAAAAAAAATACTGAAAAGGTCTCTTCGGTGCATTTAATCCATATGACTAGCTTATGTATTAACAGGCAATTCCAGAGTGCAAAAGTGTAATTGTGTAATTTGTTGCAACCTTTATTACACGCGATTAAACAAAATCACAAAAAAAAAGAGTTTTTATGATGCCAGATTGATTACCATGTAACAACAAAGCCAAGCAGATAAATAACCCCGACTTCTCTGCATCAGTAACTAGCACCTTGTAACTATTGGAATACAGCTTAGTTTCTTCTGTGCCTTTCGTTGTTGAATAATATATTTGAGGTTCAGAGTCCGTATGCACATTTGAACTGCTTCCTTGAAGTCTGCTACTGCCTTCCTCTAGCAAGTACAGTTTTCTTCTTAAAGATTGTACGATATAACATTTATTTCATTTAAACACCAAAATTAAGCTT

Fln Alignment:

Contig13839___VSLNTEAGSGSHLNVA-SKNKNMXXXXXXXXXXXXXNTVPFYKLFDLADSLDITLMSIGTFASVANGLAFPIMTVLFGSLTNAFGQN-TDXXXXXXXXXXXXXNFIYLAAGTAVASFFQVAFWMCTGERQAARIRSFYLKTILRQDIAFFDSETSTGEVIGRMSGDTVLIQDAMGEKVGKFIQLMSTFIGGFVVAFIKGWKLTLVMLCVIPLLVLAGGAMAMIISKMSSRGQQAYAEAGNVVEQTIGSIRTVASFTGEKKAVTDYEKFLTVAYKAAAHQGLASGFGLGTLLFIMFCSYALALWYGSQLIIHEGYSGGSVINVIFAVLTGGMSLGQASPCLNAFGAGQAAAYKMFEAIDRKPEIDVYDTNGLVLEDIQGDIELKDVHFAYPARPDVQIFSGFSLEIPSGTTAALVGESGSGKSTVISLIERFYDPQAGEVLIDSVNIKQFQLKWIRQKIGLVSQEPALFATTIKENIAYGKDGXXXXXXXXXXXXXXXXXXXXXMPQGFDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRIMLNRTTVIVAHRLTTVRNADMIAVVQRGSIVEKGSHSELIMNPSGAYSQLISLQEMRQTKEQYANDPDHLEIHLDDANTIGRVSSQKLSFXXXXXXXXXXXXXXXXXXXFSFSLPGGVSLQE-----DVQVDKG-RPKKGFMSWFSSKNQGDVEQGQSKHKKNVPVLRLASLNKPEIPVFIVGSIAACVHGVTFPIFGLLLSSVIASFYEPPHKLRKDASFWALMYIVLATTCLVMAPTQMYSFAVAGGRLVRRIRSLTFSKVVYQEIGWFDDSENSSGAIGARLSTDAATVRSMVGDALSLVVQNISTILAGVLIAFSANWKXXXXXXXXXXXXXXXXWVQVKFMQGFSGDSKVMYEEASQVANDAVGSIRTVASFSAEDKVMSLYNEKCSVPLKGGIRQGIISGLGLGIANFLLFSVYAVSFWVGARMVEHGETTFRKVFRVFFALTMAAMGVSQSAGLAPDIAKVKSSVNSVFEILDRKSKIDASDVSGTTLENVKGDIEFRHVSFKYATRPDIQIFRDLSLSVHSGKTVALVGESGSGKSTVISLLERFYDPDSGRILLDGVEIQKLQLKWLRQQMGLVSQEPILFNDSIRANIAYGKEGIVSDEQIIIAAEASNAHKFISRLPQGYDTSVGERGVQLSGGQKQXXXXXXXXXKDPSILLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKDADLIAVVKNGVIAEQGKHDQLLDIRDGAYASLVKLHMAS
E6Y0T0_______________VSLNIEKVSEMNSNMAKAKDKKKKENN---------KVVPFHKLFVTADSLDKLLMALGTIGAVANGVSIPLMTILFGGLINAFGENSTDGKKVMNEVSKLALEFVYLACGAGVASLLQVSCWMCTGERQATRIRSLYLKTILRQDIGFFDSEASTGEVIGRMSGDTILIQDAMGEKVGKFIQFITTFIAGFVIAFIKGWKLSLVMLSMIPLLVVSGGSMAMIISKMSSRGQQAYSEAANIVEQTIGSIRMVASFTGEKKSIEGYNKSLAIAYNAITQQGLVAGVGLGSVLFIMFCGYALALWYGSRLILDGSYTGGDVINVIFAVLMGGMSLGQTSPSLNAFSAGRAAAYKMFETIDRKPVIDVFDKSGLVLEDIQGDIELKDVRFTYPARPDVQVFSGFSLEIPSGTTAALVGESGSGKSTVISLVERFYDPQAGEVLIDGINIKKFQLKWIRQKIGLVSQEPVLFGTTIKENLLYGKDGATLEEIKAAAELANAAKFINKLPQGFDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDTESERVVQEALDRIMVNRTTVIVAHRLTTVRNADMIAVVQRGSIVEKGSHSQLITNPSGAYSQLIHLQESNRSKEQDSKDPDELEIHQDDSKVLGRVSSQRSSFRRSISSGSSGIGGSRRSYSFSYAFPGTVGLQETGGMEEISQSKGNKRRKGLMSYFRSNTQKDVEGGQSDAEKDVSILRLASLNKPEIPVFILGSIAAAMNGMIFPVFGLLLSSVIKVFYEPPHELRKDAKFWALMFIVLAVTCFIVAPTQMYCFSIAGGRLVQRIRSLTFSKVVYQEISWFDDNENSSGAISARLSTDAATVRSLVGDALSLVVQNIATIIAGIVISFTANWLLALLILAIVPLLGLQGYMQVKFMTGFTADAKLVYEEASQVANDAVGSIRTVASFCAEDKVISLYNEKCSAPLKSGVKQGIIAGLGLGFSNFVMFTQYALSFWVGARLVEDGKTTFDKVFKVFFALSMAAAGISQSAGLSPDLAKAKSSINSVFKILDRPSKIDANDESGTILDNVKGDIEFQHVSFKYPTRPDVQIFRDLCLFVHSGKTVALVGESGSGKSTAIALLERFYDPDSGRIFLDGVEIRQLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGAVTDEQIIAAAEAANAHKFISSLPQGYNINVGERGVQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQDALDRVKVNRSTIVIAHRLSTIKDADLIAVVKNGKIAEQGKHDELLKKRNGAYASLVQLHKSS

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
219	71		28		1.0
226	20		80		0.995493
2245	20		80		0.995493
2246		20	80		0.995493
2248		80		20	0.995493
2250			25	75	0.996473
4174	25		75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain