SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene13075

Length: 1176 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene13075 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	mago nashi [Taiwania cryptomerioides]	-	-	97%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	e value	Identity
Sma3	nucleus	GO:0005634	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Mago nashi protein	IPR004023	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G02140.1	MEE63, MAGO, HAP1 mago nashi family protein chr1:403467-404401 REVERSE LENGTH=150	86%
RefSeq	Arabidopsis thaliana	NP_171716.1	protein mago nashi [Arabidopsis thaliana]	86%
RefSeq	Populus trichocarpa	XP_002327029.1	predicted protein [Populus trichocarpa]	92%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	T %	Probability
956		80	20	0.995493
996	20	80		0.995493
1055	80	20		0.995493
1056	80	20		0.995493
1057	80	20		0.995493
1061	80		20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain