SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene11640

Length: 581 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene11640

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Thaumatin-like protein L4 n=1 Tax=Pinus monticola RepID=D3IZ08_PINMO	-	-	60%
FL-Next	tr=Thaumatin-like protein L4; Pinus monticola (Western white pine) (Strobus monticola).	-	-	60%
Sma3	Thaumatin-like protein	-	-	-

Source	Gene names
Sma3	5A1A.16; AP24; At1g19320; At1g75040; At1g77700; At4g11650; Cry j 3.1; Cry j 3.2; Cry j 3.3; Cry j 3.4; Cry j 3.6; Cry j 3.7; Cry j 3.8; F9E10.11; GSVIVT00001102001; GSVIVT00001103001; GSVIVT00001104001; GSVIVT00001105001; GSVIVT00001108001; GSVIVT00001109

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	cytoplasmic vesicle	GO:0031410	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	serine-type endopeptidase inhibitor activity	GO:0004867	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	xenobiotic metabolic process	GO:0006805	Biological Process	-
Sma3	response to stress	GO:0006950	Biological Process	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	response to biotic stimulus	GO:0009607	Biological Process	-
Sma3	systemic acquired resistance	GO:0009627	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	response to UV-B	GO:0010224	Biological Process	-
Sma3	regulation of anthocyanin biosynthetic process	GO:0031540	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Aminotransferase, class-II, pyridoxal-phosphate binding site	IPR001917	-	-
Sma3	Thaumatin, pathogenesis-related	IPR001938	-	-
Sma3	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	-
Sma3	Proteinase inhibitor I2, Kunitz metazoa	IPR002223	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Thaumatin, conserved site	IPR017949	-	-
Sma3		IPR017973	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G11650.1	ATOSM34, OSM34 osmotin 34 chr4:7025127-7026113 REVERSE LENGTH=244	48%
RefSeq	Arabidopsis thaliana	NP_192902.1	osmotin-like protein OSM34 [Arabidopsis thaliana]	48%
RefSeq	Populus trichocarpa	XP_002325077.1	predicted protein [Populus trichocarpa]	51%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
286		50		50	1.0
288		50	50		1.0
290	50		50		1.0
302	50		50		1.0
321			66	33	0.997452
327	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain