SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene11404

Length: 788 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene11404

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative protein kinase [Oryza sativa Japonica Group]	-	-	0.0	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%
Sma3	Leucine-rich repeat receptor-like protein kinase	-	-	6.939e-19	-

Source	ECs	Term	Type	e value	Identity
Sma3	2-alkenal reductase.	EC:1.3.1.74	-	4.268e-06	-
Sma3	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	6.129e-10	-

Source	Gene names
Sma3	AT1G31420; AT1G34210; AT1G55610; AT1G71830; AT1G72300; AT2G02220; AT2G35620; AT3G13380; AT4G33430; AT4G39400; AT5G07280; AT5G62230; AT5G62710; At1g34210; At1g55610; At1g72300; At1g78530; At2g02220; At2g35620; At3g13380; At4g33430; At4g39400; At5g07280; At

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	endosome membrane	GO:0010008	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	protein complex	GO:0043234	Cellular Component	-
Sma3	peptide receptor activity	GO:0001653	Molecular Function	-
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	transmembrane signaling receptor activity	GO:0004888	Molecular Function	-
Sma3	steroid binding	GO:0005496	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	identical protein binding	GO:0042802	Molecular Function	-
Sma3	protein homodimerization activity	GO:0042803	Molecular Function	-
Sma3	protein heterodimerization activity	GO:0046982	Molecular Function	-
Sma3	microtubule bundle formation	GO:0001578	Biological Process	-
Sma3	defense response to oomycetes	GO:0002229	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	apoptotic process	GO:0006915	Biological Process	-
Sma3	meiosis	GO:0007126	Biological Process	-
Sma3	embryo sac development	GO:0009553	Biological Process	-
Sma3	megasporogenesis	GO:0009554	Biological Process	-
Sma3	microsporogenesis	GO:0009556	Biological Process	-
Sma3	response to wounding	GO:0009611	Biological Process	-
Sma3	skotomorphogenesis	GO:0009647	Biological Process	-
Sma3	detection of brassinosteroid stimulus	GO:0009729	Biological Process	-
Sma3	brassinosteroid mediated signaling pathway	GO:0009742	Biological Process	-
Sma3	positive regulation of flower development	GO:0009911	Biological Process	-
Sma3	stomatal complex morphogenesis	GO:0010103	Biological Process	-
Sma3	response to UV-B	GO:0010224	Biological Process	-
Sma3	tapetal cell fate specification	GO:0010234	Biological Process	-
Sma3	brassinosteroid homeostasis	GO:0010268	Biological Process	-
Sma3	cell growth	GO:0016049	Biological Process	-
Sma3	defense response to bacterium	GO:0042742	Biological Process	-
Sma3	ovule development	GO:0048481	Biological Process	-
Sma3	tapetal layer development	GO:0048658	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	IQ motif, EF-hand binding site	IPR000048	-	-
Sma3	Intradiol ring-cleavage dioxygenase, C-terminal	IPR000627	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Myosin head, motor domain	IPR001609	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	NB-ARC	IPR002182	-	-
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Glucose/ribitol dehydrogenase	IPR002347	-	-
Sma3	Dilute	IPR002710	-	-
Sma3	Myosin, N-terminal, SH3-like	IPR004009	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Tyrosine-protein kinase, active site	IPR008266	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat 2	IPR013101	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-
Sma3	Homeobox, conserved site	IPR017970	-	-
Sma3	Interleukin-4/interleukin-13, conserved site	IPR018096	-	-
Sma3	Asp/Glu racemase, active site	IPR018187	-	-
Sma3	Dil domain	IPR018444	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G78530.1	Protein kinase superfamily protein chr1:29539274-29540681 REVERSE LENGTH=355	61%
RefSeq	Arabidopsis thaliana	NP_177974.1	protein kinase-like protein [Arabidopsis thaliana]	61%
RefSeq	Populus trichocarpa	XP_002300445.1	predicted protein [Populus trichocarpa]	62%

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
317		75	25		0.996473
318		75		25	0.996473
416			14	85	0.993533
417	85			14	0.993533
418		85	14		0.993533
420		14	85		0.993533
432		14	85		0.993533
433	14			85	0.993533
434		14	85		0.993533
436		14		85	0.993533

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain