SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene11205

Length: 783 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene11205

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Peroxidase n=1 Tax=Picea abies RepID=Q5W5I4_PICAB	-	-	86%
FL-Next	tr=Peroxidase; Picea abies (Norway spruce) (Picea excelsa).	-	-	86%
Sma3	Peroxidase	-	-	-

Source	ECs	Term	Type	e value	Identity
Sma3	Peroxidase.	EC:1.11.1.7	-	0.0	-

Source	KEGGs	Term	Identity
Sma3	Phenylalanine metabolism	00360	%
Sma3	Methane metabolism	00680	%
Sma3	Phenylpropanoid biosynthesis	00940	%
Sma3	Biosynthesis of phenylpropanoids	01061	%
Sma3	Metabolic pathways	01100	%
Sma3	Biosynthesis of secondary metabolites	01110	%

Source	Gene names
Sma3	AP22.54; AT3G32980; At1g71695; At2g18140; At3g32980; At3g49120; At4g08770; At4g36430; At4g37530; C7A10.930; DIDI 6G-3B; Ep; F14O23.6; F19F18.20; F26A9.5; F2K15.3; F6G17.2; F8D23.8; FBP1; FLXPER3; GMIPER1; GSVIVT00007081001; GSVIVT00013661001; GSVIVT000187

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	response to light stimulus	GO:0009416	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	unidimensional cell growth	GO:0009826	Biological Process	-
Sma3	defense response to bacterium	GO:0042742	Biological Process	-
Sma3	hydrogen peroxide catabolic process	GO:0042744	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Peptidase aspartic, active site	IPR001969	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Twin-arginine translocation pathway, signal sequence	IPR006311	-	-
Sma3		IPR017909	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-
Sma3	Peroxidase, active site	IPR019794	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G71695.1	Peroxidase superfamily protein chr1:26964359-26966557 FORWARD LENGTH=358	62%
RefSeq	Arabidopsis thaliana	NP_177313.1	peroxidase 12 [Arabidopsis thaliana]	62%
RefSeq	Populus trichocarpa	XP_002306715.1	predicted protein [Populus trichocarpa]	59%

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
553		58		41	1.0
580		58		41	1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain