SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene10920

Length: 1179 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene10920

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	subtilisin-like serine protease [Arabidopsis thaliana]	-	-	0.0	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%
Sma3	Subtilisin-like protease	-	-	1.05097e-43	-

Source	ECs	Term	Type	e value	Identity
Sma3	2-alkenal reductase.	EC:1.3.1.74	-	6.271e-06	-
Sma3	Cucumisin.	EC:3.4.21.25	-	2.06271e-42	-

Source	Gene names
Sma3	46C02.13; AIR3; ARA12; ASP48; AT3G14067; AT4g34980; At1g01900; At1g04110; At2g04160; At2g05920; At3g14067; At3g14240; At4g34980; At5g51750; At5g59100; At5g67360; F20D22.12; F22M8.3; GSVIVT00001034001; GSVIVT00001051001; GSVIVT00001055001; GSVIVT0000105600

Source	GOs	Term	Type	Identity
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	external side of plasma membrane	GO:0009897	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	extracellular matrix	GO:0031012	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	GMP synthase (glutamine-hydrolyzing) activity	GO:0003922	Molecular Function	-
Sma3	serine-type endopeptidase activity	GO:0004252	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	identical protein binding	GO:0042802	Molecular Function	-
Sma3	GMP biosynthetic process	GO:0006177	Biological Process	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	glutamine metabolic process	GO:0006541	Biological Process	-
Sma3	response to auxin stimulus	GO:0009733	Biological Process	-
Sma3	plant-type cell wall modification	GO:0009827	Biological Process	-
Sma3	lateral root morphogenesis	GO:0010102	Biological Process	-
Sma3	stomatal complex morphogenesis	GO:0010103	Biological Process	-
Sma3	regulation of cell proliferation	GO:0042127	Biological Process	-
Sma3	negative regulation of catalytic activity	GO:0043086	Biological Process	-
Sma3	mucilage metabolic process involved seed coat development	GO:0048359	Biological Process	-
Sma3	mucilage extrusion from seed coat	GO:0080001	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	Ornithine/DAP/Arg decarboxylase	IPR000183	-	-
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	RNA helicase, ATP-dependent, DEAD-box, conserved site	IPR000629	-	-
Sma3		IPR000991	-	-
Sma3	Arf GTPase activating protein	IPR001164	-	-
Sma3	GMP synthase, C-terminal	IPR001674	-	-
Sma3	Protease-associated domain, PA	IPR003137	-	-
Sma3	GMP synthase, N-terminal	IPR004739	-	-
Sma3	Domain of unknown function DUF591	IPR007649	-	-
Sma3	Proteinase inhibitor I9	IPR010259	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3		IPR011702	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Peroxisome membrane protein, Pex16	IPR013919	-	-
Sma3	Rossmann-like alpha/beta/alpha sandwich fold	IPR014729	-	-
Sma3	Peptidase S8, subtilisin-related	IPR015500	-	-
Sma3	Glutamine amidotransferase type 1	IPR017926	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-
Sma3	Chromogranin, conserved site	IPR018054	-	-
Sma3		IPR018318	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G14240.1	Subtilase family protein chr3:4741637-4743964 REVERSE LENGTH=775	54%
RefSeq	Arabidopsis thaliana	NP_566483.1	Subtilase family protein [Arabidopsis thaliana]	54%
RefSeq	Populus trichocarpa	XP_002305511.1	predicted protein [Populus trichocarpa]	56%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AE86

Fln msg: your sequence is shorter than subject: 298 - 394

Fln protein: FRGTLLGVKPAPVVASFSSRGPNPVTPEILKPDIIAPGVGILAAWTDAVGPTDLSFDHRRTEFNIISGTSMSCPHVSGIVALLKGAHPDWSPAAIKSAIMTTAYTYDTVNKREVPMGDQATGHASTPFGFGAGHVDPQRATAPGLIYDLGVNDYVNFLCSLNYSQESIKLITNMNVSCPTQIGQPGDLNYPSFSAVFDQGQSSNLSTSFIRTVTIVGPTISTYTATVIAPIGIDVTVEPPLLKFSKRHEKLSFTLRVSAQSLKFPPKTSSDTVFGSLAWSDGKHVVRSPIAITRMQS*

Protein Length: 299

Fln nts: ATTTCGTGGCACACTGTTGGGGGTCAAGCCGGCTCCCGTCGTAGCTTCCTTTTCCAGCAGAGGGCCCAATCCCGTAACGCCTGAAATTCTCAAACCCGACATTATAGCCCCCGGTGTAGGCATTCTCGCCGCTTGGACCGACGCGGTCGGTCCTACAGACCTCTCGTTCGACCACAGGCGAACGGAGTTCAATATAATATCTGGGACATCCATGTCATGCCCCCACGTTAGCGGGATCGTTGCGTTGCTGAAAGGAGCGCATCCCGACTGGAGCCCCGCCGCCATCAAATCTGCAATCATGACGACTGCTTACACTTACGACACTGTGAATAAACGCGAGGTGCCAATGGGCGATCAAGCGACGGGACATGCTTCGACACCTTTTGGTTTCGGCGCAGGTCACGTGGATCCCCAGAGAGCCACGGCTCCTGGGCTCATTTACGATCTGGGTGTGAATGACTATGTCAACTTTCTATGCAGTCTGAATTATTCTCAAGAATCCATCAAGTTGATCACAAATATGAATGTTAGTTGTCCTACTCAAATAGGACAGCCTGGGGATCTCAATTATCCCTCGTTTTCTGCTGTTTTTGATCAGGGGCAGTCTTCTAACCTGTCGACAAGCTTCATCAGAACGGTCACCATTGTTGGTCCTACCATTTCGACTTACACGGCCACCGTGATTGCTCCAATAGGGATAGACGTGACAGTGGAACCGCCCTTGTTAAAGTTTAGCAAGAGACACGAGAAGTTGAGCTTCACGCTGAGGGTCAGCGCCCAGTCCTTGAAATTTCCCCCGAAAACCAGTTCAGATACCGTCTTTGGGTCGCTGGCTTGGAGCGATGGCAAGCACGTTGTGCGGAGCCCCATTGCAATAACCAGAATGCAATCTTAG___CTGATGCTTACTCGTGTCTTTCTCGTATTAGTTGTTATGGAATAGAGAGATAGAATAATGGGAGCCCACTAAGGTCAAAGGCAGTTTGGTTTCTGGCTTCCTGGTTGTTTCAAAGGAATTAGAGCTTTCGTGTTTTCTATTGGCTTTTCATCGGAGTAAGTACATTTATGTTATAATAGATGGATAACCAAGATCTAAATATCCTGTAATAAAAAGAGAAAGCATCTGGTTGAGAAGTAAATAAAAAAATTAAGCAAATTAATTAGATTAATTGGTTGATTTGC

Fln Alignment:

Contig10920___GTLLGVKPAPVVASFSSRGPNPVTPEILKPDIIAPGVGILAAWTDAVGPTDLSFDHRRTEFNIISGTSMSCPHVSGIVALLKGAHPDWSPAAIKSAIMTTAYTYDTVNKREVPMGDQATGHASTPFGFGAGHVDPQRATAPGLIYDLGVNDYVNFLCSLNYSQESIKLITNMNVSCPTQIGQPGDLNYPSFSAVFDQGQSSNLSTSFIRTVTIVGPTISTYTATVIAPI-GIDVTVEPPLLKFSKRHEKLSFTLRVSAQSLKFPPKTSSDTVFGSLAWSDGKHVVRSPIAITRMQ
D5AE86_______________GTVLGIKPAPVVASFSSRGPNPETPEILKPDVIAPGVNILAGWTGAVGPSSLAIDRRRTQFNILSGTSMACPHVSGVAALLKGAHPQWSPAAVRSALMTTAYTQDNRGHR---MIDEASGNASTPFDFGAGHVHPERAMDPGLIYDMGTEDYVRFLCSLNYTSKAIQVITRKPTRCPARRISPGNINYPSFSAVFDLTQPKKLSTVFFRTVTNVGPPLSVYRVRVIHPRGGVTVTVKPRKLVFTEKNQKLSYTVTVTTKHIDLLP-GNADTRFCFISWTDGKHVVQSPITITRQE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain