SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene10751

Length: 653 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene10751

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice).	-	-	0.0	76%

Source	Gene names
Sma3	OsI_11579; OsJ_10850; POPTRDRAFT_178300;

Source	InterPros	Term	Type	e value	Identity
Sma3	SAC3/GANP/Nin1/mts3/eIF-3 p25	IPR005062	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002299171.1	predicted protein, partial [Populus trichocarpa]	8.0e-12	74%

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
25		33		66	1.0
26	33		66		1.0
27		33		66	1.0
28	33	66			0.997452
29	66		33		0.997452
30	66			33	0.997452
31			66	33	0.997452
32	33		66		1.0
35	66			33	0.997452
36	33			33	0.997753
38			33	66	0.997452
39		33	66		1.0
40	33			33	0.997753
41	66		33		0.997452
42	33			66	1.0
43		33		33	0.997753
46		33	66		0.997452
48		33	66		0.997452
49	33		66		0.997452
85	87			12	0.992554
276		14		85	0.993533

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain