SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene10003

Length: 1130 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene10003

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Sma3	Lustrin A-like	-	-	5.319e-07	-

Source	Gene names
Sma3	At1g48880; At1g60790; At1g60795; At1g73140; At2g30010; At2g30900; At2g40150; At2g40150/T7M7.4; At3g06080; At3g11570; At3g12060; At3g14850; At5g06230; At5g19160; B1047G05.34; F24F17.6; F24K9.24; F27K7.9; F28L1.1; F8A5.30; GSVIVT00007038001; GSVIVT000142940

Source	GOs	Term	Type	e value	Identity
Sma3		GO:0007242	Biological Process	0.0	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase C-like, phorbol ester/diacylglycerol binding	IPR002219	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3		IPR004253	-	-
Sma3	WRC	IPR014977	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G19160.1	TBL11 TRICHOME BIREFRINGENCE-LIKE 11 chr5:6430725-6432456 FORWARD LENGTH=464	55%
RefSeq	Arabidopsis thaliana	NP_197417.1	protein trichome bi	55%
RefSeq	Populus trichocarpa	XP_002311838.1	predicted protein, partial [Populus trichocarpa]	71%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LL59

Fln msg: Distance to subject end: 226 aas, your sequence is shorter than subject: 258 - 484

Fln protein: MKHWWVQLSRIPVAYTARICRTVRNATISWLSAILVVLLLVLYFGISVVPVGFFMYTSPVKLSSIADSKNWNTTIVSPKFSARPTSYHLQKEPRNETSRHDFESGNQNSTLQGLEIVKNVTEFVQSGECDFSVGSWVWDDSYPLYESRNCPFLDAGFRCQENGRPDSDYQKWRWQPSLCDLPRFNANTFLERIRNSRVVFVGDSIGRNQWESLICMLSGAIPNKSRIYEVHGNPITKHKGFLSFKFEDYNCTVEYTFT

Protein Length: 259

Fln nts: GAGTGTGGGGGCACCCTAGGCAGGGCGATCGGCAAGACTCTGGGGATTTTCAAAAGGAATTTTATTATTCCCTGGTCAGAAAAAGGGGCCTGGGTTGTCGGTGGTGCGTGCTTTGGGAACTTTGCATGGAGTCATGGCCGCAACCAAGTCACCACTGTGGGTAATCATGGCCGCAACTAAGCACCAATTTGCATGTAATCACCACCATGCATTGAATGCTATAGCCGACAACCCCATATAAATAATTATGCATACCCAGTCCCCAATTATTCTGAGAGAAGAAGAAAGCGCAACTCTGCAGACTCTCAAGTAGGGCAAGGTATGTTAAACTCAGAGCTTTTCGCCTGAATTCCAG_-_ATGAAGCATTGGTGGGTTCAACTCTCCAGGATACCTGTTGCATACACAGCCAGAATCTGTCGTACTGTCCGAAATGCGACAATATCTTGGCTCTCTGCAATTCTAGTGGTTCTACTGTTGGTTTTGTATTTTGGCATCTCAGTAGTTCCTGTTGGGTTTTTCATGTACACAAGCCCTGTGAAACTCAGTTCTATAGCAGATAGTAAGAATTGGAATACCACTATTGTTTCCCCTAAATTTTCTGCACGACCCACTTCATATCATCTGCAGAAGGAGCCGAGAAATGAAACTTCCAGACATGATTTTGAAAGCGGAAATCAGAATTCTACTCTTCAAGGGTTGGAAATTGTGAAAAATGTCACTGAGTTTGTGCAATCTGGGGAGTGTGATTTTTCTGTGGGTTCGTGGGTGTGGGACGATTCCTATCCCCTGTATGAGTCTCGCAACTGCCCTTTTCTTGATGCAGGATTTCGGTGCCAGGAGAATGGCAGGCCAGATAGTGATTACCAGAAATGGAGATGGCAGCCTTCTCTCTGTGATCTCCCAAGGTTCAATGCAAACACTTTTCTGGAGAGGATTCGGAACAGTCGTGTAGTGTTTGTAGGGGATTCCATTGGAAGGAATCAGTGGGAGTCTCTGATTTGCATGCTATCGGGAGCAATCCCGAACAAGTCCCGGATTTACGAAGTCCACGGAAATCCCATCACAAAGCACAAGGGATTTCTGTCCTTCAAATTTGAAGATTATAATTGTACAGTAGAATATACATTCACCG

Fln Alignment:

Contig10003___MKHWWVQLSRIPVAYTARICRTVRNATISWLSAIXXXXXXXXYFGISVVPVGFFMYTSPVKLSSIADSKNWNTTIVSPKFSARPTSYHLQKEPRNETSRHDFESGNQNSTLQGLEIVKNVTEFVQSGECDFSVGSWVWDDSYPLYESRNCPFLDAGFRCQENGRPDSDYQKWRWQPSLCDLPRFNANTFLERIRNSRVVFVGDSIGRNQWESLICMLSGAIPNKSRIYEVHGNPITKHKGFLSFKFEDYNCTVEY
B8LL59_______________MKSCWVQPSRILVAYTVRICRTVRSATISWLSAILVVLLLVLYFGISAVPVGFLMYTSPLKLSSIADSNNKNTTTLSPKFSARSTSYNLQKEPRNETSRHDFERGNENSTVQGLEIVKKGNEVVQSGECDFSVGSWVWDDSYSLYESRNCPFLDGGFRCQENGRPDSDYLKWRWQPSHCDLPRFNANTFLERIRNSRVVFVGDSIGRNQWESLICMLAEAIPNKARIYEVNGNPITKHKGFLSFKFEDYNCTVEY

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
886	14			85	0.993533
887	14	85			0.993533
889		85	14		0.993533
1128			25	75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain