SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene9790

Length: 1718 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene9790

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Thiosulfate sulfurtransferase n=1 Tax=Datisca glomerata RepID=Q9ZPK0_DATGL	-	-	75%
FL-Next	sp=Sulfurtransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	e value	Identity
Sma3	thiosulfate sulfurtransferase activity	GO:0004792	Molecular Function	0.0	-
Sma3	sulfate transport	GO:0008272	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Rhodanese-like	IPR001763	-	0.0	-
Sma3	Thiosulphate sulfurtransferase, conserved site	IPR001307	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G79230.1	ST1, ATMST1, MST1, ATRDH1, STR1 mercaptopyruvate sulfurtransferase 1 chr1:29800824-29803679 FORWARD LENGTH=379	69%
RefSeq	Arabidopsis thaliana	NP_001077848.1	thiosulfate sulfurtransferase [Arabidopsis thaliana]	69%
RefSeq	Populus trichocarpa	XP_002310670.1	predicted protein [Populus trichocarpa]	77%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NWI8

Fln msg:

Fln protein: MASIISRTAVALIRPAQMHHRWRVLRPAALFVLQIINAILFQNLQRVSGNFPLEQCCISTAAVQSPWVPVCSIVAASSARYTTASTLSDSTDNDDCVVSADWLHQNLRQPDVKVVDASWYMPNEQRNPLQEFQDAHIPGAVFFDVDKISDQTSNLPHMLPSEKAFAAAVSALGIENKDKVIIYDGKGIFSAARVWWMFRVFGHDKVWVLDGGLPQWRGSGYEVETSASGDAILKVMEASDVIEKVYQGQPVAPISFTTNFQPHLVWSLEQVKHNIEEKKYQHIDARGKSRFDGAVPEPRKGIRSGHVPGSKCIPFNEVLNDRKELLDSNELAKRFEKEGISLNYPVVASCGTGVTACILALGLHRLGKCDVAVYDGSWTEWGAQSDTPVDVSASAT*

Protein Length: 398

Fln nts: CTAAACCCAGAGGACTGACAATGGGTCCACCCTTATTCAGCGGGCATCCTTCCGAGGCAGCCTGCTTAGCCTATCAGAGCAATA_-_ATGGCGTCCATTATTAGCAGAACAGCAGTAGCATTGATCCGGCCGGCACAAATGCACCACCGATGGCGGGTACTGAGGCCAGCTGCTTTATTTGTTCTCCAGATAATCAATGCAATATTATTCCAGAACTTGCAGAGAGTTTCAGGAAACTTCCCGTTGGAACAATGTTGCATTTCAACAGCTGCCGTGCAATCTCCTTGGGTTCCGGTTTGTTCCATTGTAGCTGCCTCTTCTGCCCGGTACACCACGGCTTCGACTTTGAGTGATAGCACCGATAATGATGACTGTGTTGTTTCTGCCGATTGGCTTCATCAAAATCTCAGGCAACCCGATGTCAAGGTTGTTGATGCATCTTGGTACATGCCAAATGAGCAGAGAAACCCACTGCAAGAATTTCAGGATGCACATATTCCTGGTGCAGTCTTCTTTGACGTGGACAAAATATCGGACCAGACTTCAAATTTGCCACATATGCTACCATCAGAGAAAGCATTTGCTGCTGCAGTATCTGCTCTTGGAATTGAAAATAAAGATAAAGTGATTATTTATGATGGAAAAGGAATTTTCAGTGCTGCTCGTGTGTGGTGGATGTTCAGAGTTTTTGGTCATGACAAAGTTTGGGTTCTAGATGGAGGCTTACCGCAATGGCGTGGTTCAGGCTATGAAGTGGAGACAAGTGCCTCTGGCGATGCAATTTTGAAGGTCATGGAAGCCAGTGATGTTATTGAGAAAGTGTATCAAGGGCAACCGGTTGCTCCCATCAGTTTTACCACAAATTTTCAACCGCATTTAGTGTGGTCTTTGGAACAGGTGAAACATAATATAGAGGAAAAAAAGTACCAACACATTGATGCACGTGGAAAGTCCAGGTTTGATGGTGCAGTACCAGAGCCTCGCAAAGGTATTAGAAGTGGTCATGTGCCTGGAAGTAAATGCATCCCTTTCAATGAGGTATTGAATGACAGGAAAGAACTCTTGGACTCAAATGAACTTGCAAAACGCTTTGAGAAAGAAGGCATTTCACTGAATTATCCAGTAGTTGCGTCTTGTGGGACTGGAGTTACTGCATGTATTCTTGCACTGGGTCTTCATCGCCTTGGTAAGTGTGACGTTGCTGTCTATGATGGCTCTTGGACAGAATGGGGAGCACAATCTGACACACCAGTTGATGTTAGTGCATCTGCAACATAG___AATATAAAAACGGTTTAAAGTATATTTTCCAGTCTTTCATGTGATAAAATGTACAATTAACTTTTGATATGCAACATAAGAATTCGAATTTGAAAAGCATACATTTCTTACTAATTTCTTTGACTATAGCACAAGTTTCTCAATTGTCTGTTGCAATATTTCTTCCTGAATAATAACTAACATGTCAGGCCTCTCGGAGGGATTTTTGGAGAAACGTTTTTAGTAGATGGAATATGAATTGTCAAAATTTTCAATGCAATATCATGATTTCTAGTCCAGAGATGGAATTTCTGGGAGAATTGTATGCCTTTTGAAAACAAGGACAGGTAACATCACTAGAGATTATTATTTTGCTTGTGTTAACTGGCTGTCAAAAATATGTTTCTTGGAAAACCATGTTTTGAAAGATTATTTAGAAGCAACAGCTGGTCTTTGATTTGTTG

Fln Alignment:

Contig9790___MASIISRTAVALIRPAQMHHRWRVLRPAALFVLQIINAILFQNLQRVSGNFPLEQCCISTAAVQSPWVPVCSIVXXXXXXXXXXXXXXDSTDNDDCVVSADWLHQNLRQPDVKVVDASWYMPNEQRNPLQEFQDAHIPGAVFFDVDKISDQTSNLPHMLPSEKAFAAAVSALGIENKDKVIIYDGKGIFSAARVWWMFRVFGHDKVWVLDGGLPQWRGSGYEVETSASGDAILKVMEASDVIEKVYQGQPVAPISFTTNFQPHLVWSLEQVKHNIEEKKYQHIDARGKSRFDGAVPEPRKGIRSGHVPGSKCIPFNEVLNDRKELLDSNELAKRFEKEGISLNYPVVASCGTGVTACILALGLHRLGKCDVAVYDGSWTEWGAQSDTPVDVSASAT
A9NWI8______________MASIVSRAAGAWIRPVRMHHRWRALRPVTCIVLQIIDAILFQNLQRVSGNFPAKHCCISTAAVQFPCVPVCSIVAATSARYTTASTLCNSTDNDDCVVSADWLHQNLRQPDVKVVDASWYMPNEQRNPLQEFQDAHIPGAVFFDVDKISDQTSNLPHMLPSERAFAAAVSALGIENKDKVIIYDGKGIFSAARVWWMFRVFGHDKVWVLDGGLPQWRASGYEVETSASGDAILKVMEASDVIEKVYRGQLVAHTSFTTDFQPHLVWSLEQVKCNMEDKKFQHIDARGKARFEGAAPEPRKGIRSGHVPGSKCIPFNEVLNDRKKLLDSDELAKRFEKEGISLDSPVVASCGTGVTACILALGLHRLGKSDVAVYDGSWTEWGAQSDTPVEITASAT

SNPs (tot: 24)

Position	A %	C %	G %	T %	Probability
26			66	33	0.997452
27		33	66		0.997452
28			33	33	0.997753
30		66	33		0.997452
131	33		66		0.997452
178		25		75	0.996473
243		66	33		0.997452
289	16		83		0.994512
571	7		92		0.999664
768		85		14	0.993533
807		11		88	0.923564
810			11	88	0.923564
812			11	88	0.923564
815	88	11			0.923564
817	88	11			0.923564
818	88			11	0.923564
1296	87	12			0.992554
1298			87	12	0.992554
1390		14		85	0.993533
1401	80		20		0.995493
1464		83		16	0.994512
1520		11		88	0.923564
1602		66		33	0.997452
1634	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain