SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene9362

Length: 1889 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene9362 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Benzoyl CoA benzoic acid benzoyltransferase n=1 Tax=Glandularia x hybrida RepID=Q2PF15_VERHY	-	-	0.0	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%
Sma3	Benzoyl coenzyme A: benzyl alcohol benzoyl transferase	-	-	1.042e-12	-

Source	ECs	Term	Type	e value	Identity
Sma3	10-deacetylbaccatin III 10-O-acetyltransferase.	EC:2.3.1.167	-	1.032e-07	-

Source	KEGGs	Term	e value	Identity
Sma3	Diterpenoid biosynthesis	00904	1.032e-07	%
Sma3	Biosynthesis of terpenoids and steroids	01062	1.032e-07	%
Sma3	Metabolic pathways	01100	1.032e-07	%
Sma3	Biosynthesis of secondary metabolites	01110	1.032e-07	%

Source	Gene names
Sma3	AAT1; AAT2; AAT3; At3g03480; At5g17540; CtAT23; GSVIVT00001202001; GSVIVT00003212001; GSVIVT00003215001; GSVIVT00003217001; GSVIVT00003220001; GSVIVT00009436001; GSVIVT00013875001; GSVIVT00025220001; HCQL2; HCQL7; HMT/HLTase; K10A8_20; LOC_Os10g35950; OSI

Source	GOs	Term	Type	Identity
Sma3		GO:0008415	Molecular Function	-
Sma3	acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity	GO:0010327	Molecular Function	-
Sma3	transferase activity, transferring acyl groups other than amino-acyl groups	GO:0016747	Molecular Function	-
Sma3	green leaf volatile biosynthetic process	GO:0010597	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Transferase	IPR003480	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LLR5

Fln msg:

Fln protein: MAPVLSHVNPTAVGMNMGITRQPEILVTPALPPSITDRFLYLSNLDDPAILRLHVPLIHFYRYNPSMKNQDPVKTIREALSKTLVHYFPFAGRLRDADNSKLQLECTGEGVLFVEADAPHLSLKDFGDVICPPFPCLDELLYQPSGSETITNSPLLIVQVTRLKCGGFIFALRFNHCVTDAIGILQFLKALAEMARGASQPSILPVWNREILQPRTNTLDLTDDDQYADHHALNLSADNEYTPQEQVEEEMQTISVLFGPEEIADLKSQVGGKCSTFEVLSAWLWRSRSKVLNIPADQESSLVFPIDIRSRLQPPLPSGYYGNGLSVSFAVARAGDLIEKPLSFAVKLISDAKRIVDDEYVRAQIDMLEAVGHTAPTLVGSFMANDHSKVDFAGVDFGWGKAEYGGVAVAADPNESMYVRVRSTSSGIEKIVVPICLPTTAIQTLQQDLRYATC*

Protein Length: 456

Fln nts: ATGGGTAACCTGCACTAAAAAACTCGTTTGTCAGAAGTCAGCATTAGTTTTGGATCGCTTCACAGCCGCTGTCTTCTCTCAGCAGCAAGTAAAGTTCAAGTTGTGGGTATTCTTTCGAGATATTGAGTTTTCAGACAGTCCGAAGCCCTC_-_ATGGCGCCCGTTCTCTCTCACGTTAACCCCACTGCTGTGGGGATGAACATGGGTATCACCCGGCAACCAGAGATTCTCGTGACACCCGCTTTGCCACCTTCCATTACGGATCGGTTCCTATACCTTTCCAACCTCGACGATCCTGCTATACTCAGACTCCATGTTCCTCTCATCCACTTTTATCGCTATAATCCCTCCATGAAAAATCAGGATCCAGTGAAGACTATTAGAGAAGCTCTGAGCAAGACCTTGGTGCATTACTTCCCTTTTGCGGGAAGACTGAGGGATGCAGACAATTCAAAGCTCCAACTCGAGTGCACTGGAGAAGGAGTGTTATTTGTAGAAGCTGATGCCCCTCATCTTTCCTTGAAAGACTTTGGAGACGTTATCTGTCCGCCCTTTCCCTGTCTGGATGAATTGCTCTATCAACCTTCTGGATCCGAAACCATTACCAATTCTCCACTTCTTATCGTTCAGGTGACGCGTTTGAAATGCGGAGGGTTCATATTTGCTTTGAGGTTCAATCACTGCGTGACCGACGCCATTGGAATCCTCCAGTTCTTGAAGGCCCTCGCTGAAATGGCGAGAGGGGCATCTCAGCCTTCGATTCTCCCTGTTTGGAATAGGGAAATCCTCCAACCCCGCACGAATACATTAGATCTCACAGATGATGACCAATATGCCGACCACCATGCATTAAATCTCAGTGCAGATAATGAATACACGCCGCAAGAACAAGTGGAAGAAGAAATGCAGACTATATCAGTTTTGTTCGGGCCAGAAGAAATTGCAGATCTGAAAAGCCAAGTGGGAGGGAAGTGTTCGACATTTGAAGTATTATCAGCTTGGTTGTGGCGGTCCAGAAGCAAGGTTCTCAATATCCCTGCCGACCAGGAATCGAGTTTGGTCTTTCCAATAGATATCAGATCGAGGCTTCAACCGCCCCTTCCCAGTGGCTACTATGGCAACGGACTCAGTGTCTCCTTCGCCGTGGCAAGAGCAGGGGATTTAATAGAAAAGCCACTGTCTTTTGCTGTCAAATTAATTAGTGACGCCAAAAGAATTGTTGACGATGAGTACGTGAGAGCCCAAATTGACATGCTGGAAGCGGTAGGGCATACTGCACCTACTCTCGTCGGCTCTTTCATGGCCAATGATCACTCCAAAGTTGATTTTGCAGGAGTGGATTTTGGGTGGGGAAAAGCGGAGTATGGAGGCGTTGCGGTGGCTGCGGACCCAAACGAATCAATGTACGTTCGTGTGCGCAGCACAAGTAGCGGAATCGAAAAGATCGTGGTGCCAATTTGTCTACCGACCACTGCCATTCAAACACTTCAGCAAGATCTCCGCTACGCCACATGCTAA___TGCCATGCCAGTTCGTTGCTAAAGATGGAGGTTTAGTCTTAGTCGTCGCTAGTTAGCTCCGATGTGATGTATTTAATGCATGTTTTGTCAGCTTCCCTATACAGGTTAAGATGGAGGTTTAGTCTTATTAGTCGCTGGTTCAGATTTTATGTGTTTTATGTATGTTTTGTCAGCTTCCCTATACAGCATAAGTTGGTCGTGTCCTTTTTTCGTGAACTTGTCAAATTCTCTAATTCCTGAGCGCGAGCTCCCGGAATGAAGAATTCACAATTTAATAAACTTTCATTTTTGAATGCGAGAGCATGGAATGAAAGCAGTGTTAAATGCAGGATAGTCATTATCTAATAAATTTGAATATCAATTCATGGTACACC

Fln Alignment:

Contig9362___ITRQPEILVTPALPPSITDRFLYLSNLDDPAILRLHVPLIHFYRYNPSMKNQDPVKTIREALSKTLVHYFPFAGRLRDADNSKLQLECTGEGVLFVEADAPHLSLKDFGDVICPPFPCLDELLYQPSGSETITNSPLLIVQVTRLKCGGFIFALRFNHCVTDAIGILQFLKALAEMARGASQPSILPVWNREILQPRTNT---LDLTDDDQYADHHALNLSADNEYTPQEQVEEEMQTISVLFGPEEIADLKSQVGG---KCSTFEVLSAWLWRSRSKVLNIPADQESSLVFPIDIRSRLQPPLPSGYYGNGLSVSFAVARAGDLIEKPLSFAVKLISDAKRIVDDEYVRAQIDMLEAVGHTAPTLVGSFMANDHSKVDFAGVDFGWGKAEYGGVA---VAADPNESMYVRVRSTSSGIEKIVVPICLPTTAIQTLQQDLRYAT
B8LLR5______________VTRKPAVLVAPSRPTP--KEFLYLSNIDDQAGLRFHIPVVQFYQFDPSKKGEDPARVIREGLAKALVFYYPFAGRLRDAPAGKLVVDCTGEGVLFVEADAD-VALEEFGD-LQPPFPCWEDLLHDVPASLTLTNSPLLLIQVTRLRCGGFIFALRLNHSMCDAVGLVQFMNALGEMAKGASRPSVRPVWKREILRPRTNPAVKFPLYEYNQIEDK-------DGQMVPVN----EMSHNSFFFGPSEMESLKRQAVGQGMKSRTFEVLSACLWRFRTRALQLPSEQEVRLIFPLDARTRFDPPLPKGFYGNAISFACAKTTAGELAKNPLSFALKLINEAKTAVNDEYMRSVIDLMELEGRPHFTVVGSFLVSDVTKIGFGDVDFGWGRAAYGGPAKGGVGAVPGVSSFFIPLRNTSGVEGILVPVCLPSAAMKIFQAEISEAT

SNPs (tot: 47)

Position	A %	C %	G %	T %	Probability
158	85			14	0.993533
173	14		85		0.993533
330	20		80		0.995493
332		66		33	1.0
341		83		16	0.994512
352	14			85	0.993533
375	11	88			0.923564
378			11	88	0.923564
379	88			11	0.923564
405		12		87	0.992554
458	12		87		0.992554
474		87		12	0.992554
511	11	88			0.923564
514		88		11	0.923564
612		10	90		0.90298
620	90	10			0.90298
621		10	90		0.90298
622		10		90	0.90298
633	11		88		0.923564
740		16		83	0.994512
813		20	80		0.995493
814	80	20			0.995493
815		20		80	0.995493
816	20	80			0.995493
978			75	25	0.996473
982		33		66	0.997452
1009		66	33		0.997452
1047			75	25	0.996473
1148		80		20	0.995493
1173	16		83		0.994512
1183	83		16		0.994512
1504	11		88		0.923564
1505	88			11	0.923564
1507		88		11	0.923564
1599			87	12	0.992554
1600			87	12	0.992554
1762	90		10		0.90298
1850	12		87		0.992554
1855		87		12	0.992554
1872	20			20	0.99255
1873			20	80	0.995493
1875		25		75	0.996473
1876			25	75	0.996473
1877	75			25	0.996473
1878		25	75		0.996473
1881		75		25	0.996473
1888	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain