SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene8938

Length: 1700 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene8938

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NAD-dependent dyhydrogenase, Gfo/Idh/MocA family n=2 Tax=Andropogoneae RepID=B6TIK9_MAIZE	-	-	0.0	55%
FL-Next	tr=Putative uncharacterized protein Sb02g018670; Sorghum bicolor (Sorghum) (Sorghum vulgare).	-	-	0.0	60%

Source	Gene names
Sma3	At3g20790; GSVIVT00024668001; Os09g0280300; OsI_30682; OsJ_28659; P0651G05.14; PHYPADRAFT_116103; PHYPADRAFT_125059; PHYPADRAFT_169329; RCOM_1576910; VITISV_020272;

Source	GOs	Term	Type	Identity
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Oxidoreductase, N-terminal	IPR000683	-	-
Sma3	Oxidoreductase, C-terminal	IPR004104	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT3G20790.1	NAD(P)-binding Rossmann-fold superfamily protein chr3:7268802-7271099 FORWARD LENGTH=355	0.0	58%
RefSeq	Arabidopsis thaliana	NP_188715.2	Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]	0.0	58%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: C5X863

Fln msg:

Fln protein: MVEGNLEVPQLALLGSGIFVRTQYIPRLREITHLVSLKVLWSRSEKSAKVAAALAQDFSPNIDVKWGEAGLDEIIQDKSINGVAVVLAGQAQVEISMKILRAGKHVLQEKPAASSIKEAAASLSFYRSLSVNGVCAPIWAIAENYRFEPALLEAAKLVKELGDLMNIQVTAEAPMNSLNPYFSSEWRRNFNGGFTLDVGVHFIAGLRLVSGCEVTSVAAITHHVDPSLPPPDNVSALFQCENGCPGVFTLSMSSTSRKISFRVVGSKGTVEAERFSKDGQHGYTVSYYPLTGDPQVSFYPFSGVNEELKAFVNDMVKATSEDKDVSGPDSRSSLVEGTRDVAVIEAMLQSSAKQGAPVVVEHML*

Protein Length: 366

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTATCCAATGTGTCTAAGAAAGGAAAAAATGAGTCTAAACATGGTGTGACATTCCAGGAATTTTATACGTCTGACCTTGGCTGTCGCTCTTTCTTGTTTTTGGGTTTATCTTTGAGGGCGTATATTTGATGTTCATCATCAGATTAGTAATGCAGAAGTCACTATCTTTTTCCTCAAAAACTTATATGCATATGTTGATTCACTAGGTAGTCCTGCCAGCTAAAAACAGTTCGGAGGGTAGTCTCGCCGGCTAAAAACAGTTCGGAGAGTCTCCTGTCACACTTCCCAGGTGTTTGGAGAACTACAAAGTCAACCGTGCAGATAGATCACTAGGGACACT_-_ATGGTAGAAGGAAATTTGGAAGTGCCTCAACTAGCATTACTTGGTAGTGGAATTTTTGTGCGCACTCAATACATTCCTCGCTTACGAGAGATTACTCATTTGGTCTCTCTTAAAGTTTTATGGAGCCGTAGTGAGAAATCCGCAAAGGTTGCAGCAGCACTTGCTCAAGATTTTTCTCCAAATATAGATGTCAAGTGGGGTGAAGCAGGCCTTGATGAAATTATTCAAGATAAATCAATAAATGGTGTTGCTGTTGTTCTTGCAGGCCAAGCTCAGGTTGAGATATCAATGAAGATATTAAGAGCTGGGAAACATGTCCTTCAAGAGAAACCTGCTGCCAGCTCCATCAAAGAAGCAGCAGCTTCTCTGTCATTTTACAGGTCTCTGTCTGTTAATGGGGTCTGTGCACCGATATGGGCCATTGCAGAAAATTACCGTTTTGAACCTGCTCTATTAGAGGCAGCAAAGCTGGTGAAGGAGTTGGGTGACCTAATGAATATTCAAGTTACTGCAGAAGCACCAATGAACAGTTTGAATCCTTACTTTTCAAGTGAGTGGAGGCGGAATTTCAATGGGGGCTTTACTCTTGATGTTGGAGTGCACTTCATTGCAGGCTTGAGATTGGTTTCAGGTTGCGAGGTCACTTCTGTGGCGGCTATTACTCATCATGTTGATCCTTCCTTGCCTCCGCCAGATAATGTGTCAGCACTTTTCCAGTGTGAGAATGGCTGTCCTGGAGTATTTACACTGTCTATGTCTTCAACTTCAAGGAAGATTTCTTTTCGAGTTGTAGGATCAAAAGGAACAGTGGAGGCAGAGCGTTTCTCAAAAGATGGTCAACATGGTTACACAGTATCATACTATCCTCTAACTGGCGATCCTCAGGTTTCATTCTATCCATTTTCTGGGGTAAATGAAGAATTGAAGGCTTTTGTGAATGACATGGTTAAGGCAACATCTGAGGACAAAGATGTGAGCGGGCCGGATTCTCGAAGTTCATTAGTTGAAGGGACCCGGGATGTTGCTGTGATTGAAGCTATGTTGCAATCCAGTGCTAAACAAGGGGCGCCTGTGGTTGTCGAGCATATGCTATAA___TTTATAGATTAGTGAATAACAGAAGCGAGGCTAATAGGAAGGAAATGAGCATGCCATTAACTGCAGAGAGTGATTGACGATTTATTTCAAAGCTCTGTCTGGGATATACAAGAGATAGTTTGGTTAACCTGTTTATTTATTATAGATAATAATTTAAATTAATTTTTTGGATTGGTATGTTATTGTAAGGTTTGTTATGGTTTTATACTTAATGATCAAAAACTCATAATTTGACAAAAA

Fln Alignment:

Contig8938___GNLEVPQLALLGSGIFVRTQYIPRLREITHLVSLKVLWSRSEKSAKVAAALAQDFSPNIDVKWGEAGLDEIIQDKSINXXXXXXXXXXXXEISMKILRAGKHVLQEKPAASSIKEAAASLSFYRSLSVNGVCAPIWAIAENYRFEPXXXXXXXXXXXXGDLMNIQVTAEAPMNSLNPYFSSEWRRNFNGGFTLDVGVHFIAGLRLVSGCEVTSVAAITHHVDPSLPPPDNVSALFQCENGCPGVFTLSMSSTSRKISFRVVGSKGTVEAERFSKDGQHGYTVSYYPLTGDPQVSFYPFSGVNEELKAFVNDMVKATSEDKDVSGPDSRSSLVEGTRDVAVIEAMLQSSAKQGAPVVVE
C5X863______________GRAELPRIAVIGAGIFARTQYIPRLREIAHLVVLKAIWSRTQESAKAAAELARDFAPDIECKWGDVGLEEIMGDSSIMGVAVVLAGQVQVELSLKMLKAGKHVIQEKPASGSTTEAETALSIYNSFPNQFPHKPIWAVGENYRFEPAFIESSKLINDIGDMMHIQVIIEGSMNSSNPYFNSTWRRNFVGGFILDMGVHFIAGLRMLVGSEITSVSSISRHVDMTLPPPDNICSLFQLENGCAGVFVFAVNSRSPKILWRVDGTKGTIQVERGVDSGKHGYQVLFSGENGQCQKTFYPFCGVNEELKTFVHDMLAADKDGDHKAEP--RSSYVEGARDVAVLEAMLESSAKQGAPVQVK

SNPs (tot: 3)

Position	A %	G %	T %	Probability
1351	11	88		0.999952
1630		83	16	0.994512
1631		16	16	0.988813

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain