SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene8836

Length: 3936 nt

UniGene Fasta

>sp_v3.0_unigene8836
ACATTTCACACGGTACCTCAGCTTCTACAGGGTTCAGGTGCAGGCAGGAGGACAGCAGACAGGCAGTCAGGAATTCAGGCTACTGATGGTGATGAGGAGGAGTTTCATTCTCCTATGGGAGAAGCATGCTCAGGGAAGAGGAAGCCCAAGTGGCTTCAGGACACCTTGAGAGATGCCACATCTGTTGCTGAGCCGAAGAGGCCGGTCAGAGAGTTTAGACCACTTGAGAGGTTTTGTAGCTATATGGCGATGGTTACCAACATCCTTGACTCTGAGCCTTCTAGCTATGAGGAGGCAGCTAGCCAGCAGGTCTGGAGAGAGGCCATGCAGGAGGAGTATTCTTCTATCATGAAGAATGATGTTTGGGAGGTGGTGCCGAGGCCTGAGGGCAAATCCGTGGTTACTTCCAGATGGCTTTACAAGGTAAAGCATGCTGCAGATGGCAGCATTGAGAAATTCAAAGCGAGGTTTGTGGCTAGAGGGTTCTCCCAGGTAGAGGGAGTTGATTATGAGGAGACCTTCGCTCCCGTGGCTCGATATACTTCGATCCGCTCCATTATATCGATAGCAGCAGAGATGGGTTGGAAGATCCACCAGATGGATGTGAAGACTGCATTTCTCAATGGCTTCATACAGGAGGAGGTGTACATTGAGCAGCCACAGGGCTTTGAGGTGCATGGGAAGGAGTCCCATGTGTGCAGACTGAAGAAGGCCCTTTATGGCCTGAAGCAAGCTCCCAGAGCTTGGTACTCCAGGATAGATACATACTTGCAGGGGATGGGTTTCACAAAGAGTGAGGCAGATCCGAACCTTTACTTTATTGTGATTGGTGAGGAGCCTCTCATTCTGGTGCTGTATGTGGATGACTTGGTCATTACAGGTGCAGAGAGACTCATAGAGCACTGCAAGAGAGATCTTGCGGCGGAGTTTGAGATGAAGGACATCGGCTTGATGCATTACTTTTTGGGTTTGGAGGTGTGGCAGGAGGAGGGGCATTTCTTCCTGGGGCAGGGGAAGTATATTGTGGACATCCTTAGCAGATTCCACATGGAGGATTGTAGACCCATGTCGACACCGATGATCACCAACTGGAAGAAGCTTCATGCTTCGGATTCCGAGTTGGTGGATCCCACATTGTACAGGCAGCTGATTGGTTCCTTGATGTATTTGGTCAACACTAGACCAGATATCTGTTTTGCAGTCAACACGATGAGTCAGTTTATGTGTGAGCCTAGGAAGGTTCACTGGGTGGCTGCAAAACACATTTTGCGGTACTTGCAGGGGACAGTGGATTATGGTCTGGACTACAGGCAGGGAGATGGAGTGAGATTGGCAGGTTACACTGATTCTGATTGGGCAGGTTGTGCTTCTGATAGGAAGAGCACTTCAGGGTGTTGTTTTGGGTTGGGTTCAGCAGTAGTGTCATGGTTCAGCCGGAAGCAGCAGTCAGTAGCATTGAGTTCAGCGGAAGCAGAGTATATGGCAGCCAGTCTAGCTAGTTGTGAGGCCATCTGGCTTCGCAAGATGTTGTTTGGCTTATTTGGTCAGCCGTTGAGACCTTCAGTGATTTACTGTGATAATCAGAGTTGCATTAAACTCACGGAGAATCCAGTATTTCATGACAGGTCAAAGCATATCGGGATCAAATATCATTTCATCAGAGACTATGTTCAGAAGGGAGCTGTGAAGCTTGAGTATATTTCCACTGATGAGCAGGTTGCAGATATTCTTACCAAAGCCTTACCACGGGGCAAGCATGTCTACTTCAGAGACAAGATGGGTGTGGTGAGGAACACCTTCCTCGGTAAGAGGGAGTGTTGAAATTTGGTACCGGAGGACAGGTGGTTCCCTAAGGCTTTGATCTTTGGCCTAGGGAAAAGTGTCCAAAAGAATTTAATTTTTCTCCTAAAGTGACTTTATAATTTTATAAAGTTAAATCTAATTTAAAAGTGACTTTAAGTGATAAAGTTACTAAGTCTAATTTTAAAGTGACTTTTATAAAGTCAATGAAAAATTAGAAAGGAAAAGTGACTTTGGAAATAAATGACTAAGTGGGTCTTTATTAAAGTGGGGTGAATTAAAAAATAGAAAGTGAGATTTAAATGAGCATTTAATCTCAGCCATTGATCTAAATCTATTTCAGCCATTGGATTTAGAGATCACCCAAAAGTCACTTGGATCACCCAAAAGTCACTTGGAGTTATATTAAAGGAGGAAAATGAGCAAAAATTCTTTCATGAGCAAATTGGGAGAAGGAGAGCAAGAGAGCAAGAGAGATTTCTGAGCGAAGGAGACAGCAGCTTGGCACACATTCCAAGGCAGCAGTTGAGCAGATTTGTACAGCTGATTCAGCACACAGTGAAAGGCAGATTTTGGCACGATTTTCGAGGAGTGGTTTGCACAAAAATCGAGGAGCAGTTTGCTGATTTTTCTGCACACAAAACGGAGGCCGTACAACATTTATTGTTGTCCTGTTTGCTGTAATTTCCAGATTGCTGTGAGGCACGGGAAAGGAGATAAGTTGTAAATTTGCTTGCTGATTTTTTGCTGAATAATTCTCACTGTAAAAAGACAATTTTCAGAAATAAAGAAGAGCTCTCAAACTGGTTTTCCCCAAGAGTTGTAGGGGGTTTTTCCAGGGTCACATTGACCAAAAATCACGGTGTTATTTTCTGTCTGGCTGTCATAATTTTGCTGTGTTCTATTTCTGCAATTTCAGCAGTTGTGAAATCTCTAAATTTGTGTTTTCAGAAAATATTGTCATTTCCAGATTTTAGAATTTTTATCATGCTTGGATTTAAAACTAAATGCTGGGAGTGATAAGGAAAACTGATAACCGGAGTGGCGGTTGAAATTTCTTCATGGTATCAGAGAGCTTGGTGGGCTGAAAAGTGCAGTTTGGGATAACAAAGTGAAAATTACAGCAATCTGATTTTTACACAAAAAACAGAAACCTTTACCACAGATTTGAAAATTTCAGTTTGGTAGGACAGTGAAACATATCTTTGGGTTTGAGAGTTGAAGACAGGTTGGATGGGCAGAACAACTACAGTGCATGGAAGGAGAGAATCCAGAGCATCTTAGAGGAAGCAGAAGTCCGGAGCATTATGGTAAATACCACACAGAACCCAGTGGTAGTACCTGTTGACCCTGTACAGTTGTCAGAGTTTAACAAAAAGAATGCTAAGGCAAAAAGATTGATTCTGGAAGGAATCAAAGACCATGTCATTCCTCATGTGAGACGAAAGACTTATGCACATGAGATGTGGATAGCCTTAACCAGTCTTTACCATAGCTCAAATTAAAACAGAAAAATGGTCCTAGAGGAGAAATTGAAGGTCATTAAAATGGCTAACACTGACAGTGCTACAACATAACTCACAAAGATCAATTCAGTGAGAGATGAGTTGGCAGCCGTAGGTGAGATCATTGCACCCACTGAGTTGGTGAGGATTGCTTTGAATGGTCTTCCCAAGACTTGGGAGAATTTTGTGGATGGCATTGTTGCACGGGAAAACCTTCCCGATTGGGAGAGGTTGTGGGATGATTGCATTTAGAATGAGATCAAAAAGAACCATCTTGGGGCAACCAAACAGGTGGGAGGAGGATGACAATGTGGCATTGTTAGTAAGAAGCAAGAAGGGCAGAGCAAAGAAGCAAGCTTCCAATAGTGGAGGCAAAGGCAAAGGTAAAGGCAAGCAGCAGAACAAGGAGAAGGACTATTCCAAAGTCAAATGTTGGAATTGTCAAAAGTTGGGACACTATGTTGTTGTGTGTCCGGAGAAGAAGAACAAGAAAGGGAAAGACAAACCCATGGCAGCTTTTGCAGAGATAGACAACTTCTCAGAGAGCTTTGATCGGGAGTTTGGGTTCGTAGCTTGTGAGGCCACTAGTGCAGGATCATTTGCCATACAGGTTTAGAGGGAGTGTGCATTC

Ace file of the UniGene sp_v3.0_unigene8836

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ	-	-	0.0	48%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	48%
Sma3	Retrotransposon protein, putative, Ty1-copia subclass	-	-	1.6e-31	-

Source	Gene names
Sma3	60I2G14; AT4g02960; AT4g16870; At1g44510; At2g15650; AtRE1; AtRE2; AtRE2-1; B1065G12.28; B1110B01.4; F11I4_21; H0112G12.6; H0512B01.8; LOC_Os03g01684; LOC_Os03g05850; LOC_Os03g06540; LOC_Os03g13260; LOC_Os03g26290; LOC_Os03g30860; LOC_Os03g37890; LOC_Os03

Source	GOs	Term	Type	Identity
Sma3	intracellular	GO:0005622	Cellular Component	-
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	nucleic acid binding	GO:0003676	Molecular Function	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	alpha-mannosidase activity	GO:0004559	Molecular Function	-
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	nucleoside-triphosphatase activity	GO:0017111	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	carbohydrate binding	GO:0030246	Molecular Function	-
Sma3	mannose metabolic process	GO:0006013	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	apoptotic process	GO:0006915	Biological Process	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	DNA integration	GO:0015074	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	BTB/POZ-like	IPR000210	-	-
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	Glycoside hydrolase, family 38, core	IPR000602	-	-
Sma3	RNA helicase, ATP-dependent, DEAD-box, conserved site	IPR000629	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	BRCT domain	IPR001357	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Zinc finger, CCHC-type	IPR001878	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Ankyrin repeat	IPR002110	-	-
Sma3	Phosphotransferase system, HPr serine phosphorylation site	IPR002114	-	-
Sma3	NB-ARC	IPR002182	-	-
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Argonaute/Dicer protein, PAZ	IPR003100	-	-
Sma3	Stem cell self-renewal protein Piwi	IPR003165	-	-
Sma3	HhH-GPD domain	IPR003265	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	Retrotransposon gag protein	IPR005162	-	-
Sma3	Uncharacterised protein family Cys-rich	IPR006461	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Domain of unknown function DUF1336	IPR009769	-	-
Sma3		IPR010256	-	-
Sma3	CCT domain	IPR010402	-	-
Sma3	BTB/POZ fold	IPR011333	-	-
Sma3	Glycosyl hydrolases 38, C-terminal	IPR011682	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	BTB/POZ	IPR013069	-	-
Sma3		IPR013084	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-
Sma3	Alcohol dehydrogenase, C-terminal	IPR013149	-	-
Sma3	Domain of unknown function DUF1785	IPR014811	-	-
Sma3	Glycoside hydrolase, family 38, central domain	IPR015341	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Acyl-CoA N-acyltransferase	IPR016181	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-
Sma3	Glycoside hydrolase, family 5, conserved site	IPR018087	-	-
Sma3	Superoxide dismutase, copper/zinc, binding site	IPR018152	-	-
Sma3	Asp/Glu racemase, active site	IPR018187	-	-
Sma3	Heat shock protein DnaJ, conserved site	IPR018253	-	-
Sma3	Carbohydrate kinase, FGGY, conserved site	IPR018483	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKV8

Fln msg: your sequence is longer than subject: 569 - 363

Fln protein: MGEACSGKRKPKWLQDTLRDATSVAEPKRPVREFRPLERFCSYMAMVTNILDSEPSSYEEAASQQVWREAMQEEYSSIMKNDVWEVVPRPEGKSVVTSRWLYKVKHAADGSIEKFKARFVARGFSQVEGVDYEETFAPVARYTSIRSIISIAAEMGWKIHQMDVKTAFLNGFIQEEVYIEQPQGFEVHGKESHVCRLKKALYGLKQAPRAWYSRIDTYLQGMGFTKSEADPNLYFIVIGEEPLILVLYVDDLVITGAERLIEHCKRDLAAEFEMKDIGLMHYFLGLEVWQEEGHFFLGQGKYIVDILSRFHMEDCRPMSTPMITNWKKLHASDSELVDPTLYRQLIGSLMYLVNTRPDICFAVNTMSQFMCEPRKVHWVAAKHILRYLQGTVDYGLDYRQGDGVRLAGYTDSDWAGCASDRKSTSGCCFGLGSAVVSWFSRKQQSVALSSAEAEYMAASLASCEAIWLRKMLFGLFGQPLRPSVIYCDNQSCIKLTENPVFHDRSKHIGIKYHFIRDYVQKGAVKLEYISTDEQVADILTKALPRGKHVYFRDKMGVVRNTFLGKREC*

Protein Length: 570

Fln nts: ACATTTCACACGGTACCTCAGCTTCTACAGGGTTCAGGTGCAGGCAGGAGGACAGCAGACAGGCAGTCAGGAATTCAGGCTACTGATGGTGATGAGGAGGAGTTTCATTCTCCT_-_ATGGGAGAAGCATGCTCAGGGAAGAGGAAGCCCAAGTGGCTTCAGGACACCTTGAGAGATGCCACATCTGTTGCTGAGCCGAAGAGGCCGGTCAGAGAGTTTAGACCACTTGAGAGGTTTTGTAGCTATATGGCGATGGTTACCAACATCCTTGACTCTGAGCCTTCTAGCTATGAGGAGGCAGCTAGCCAGCAGGTCTGGAGAGAGGCCATGCAGGAGGAGTATTCTTCTATCATGAAGAATGATGTTTGGGAGGTGGTGCCGAGGCCTGAGGGCAAATCCGTGGTTACTTCCAGATGGCTTTACAAGGTAAAGCATGCTGCAGATGGCAGCATTGAGAAATTCAAAGCGAGGTTTGTGGCTAGAGGGTTCTCCCAGGTAGAGGGAGTTGATTATGAGGAGACCTTCGCTCCCGTGGCTCGATATACTTCGATCCGCTCCATTATATCGATAGCAGCAGAGATGGGTTGGAAGATCCACCAGATGGATGTGAAGACTGCATTTCTCAATGGCTTCATACAGGAGGAGGTGTACATTGAGCAGCCACAGGGCTTTGAGGTGCATGGGAAGGAGTCCCATGTGTGCAGACTGAAGAAGGCCCTTTATGGCCTGAAGCAAGCTCCCAGAGCTTGGTACTCCAGGATAGATACATACTTGCAGGGGATGGGTTTCACAAAGAGTGAGGCAGATCCGAACCTTTACTTTATTGTGATTGGTGAGGAGCCTCTCATTCTGGTGCTGTATGTGGATGACTTGGTCATTACAGGTGCAGAGAGACTCATAGAGCACTGCAAGAGAGATCTTGCGGCGGAGTTTGAGATGAAGGACATCGGCTTGATGCATTACTTTTTGGGTTTGGAGGTGTGGCAGGAGGAGGGGCATTTCTTCCTGGGGCAGGGGAAGTATATTGTGGACATCCTTAGCAGATTCCACATGGAGGATTGTAGACCCATGTCGACACCGATGATCACCAACTGGAAGAAGCTTCATGCTTCGGATTCCGAGTTGGTGGATCCCACATTGTACAGGCAGCTGATTGGTTCCTTGATGTATTTGGTCAACACTAGACCAGATATCTGTTTTGCAGTCAACACGATGAGTCAGTTTATGTGTGAGCCTAGGAAGGTTCACTGGGTGGCTGCAAAACACATTTTGCGGTACTTGCAGGGGACAGTGGATTATGGTCTGGACTACAGGCAGGGAGATGGAGTGAGATTGGCAGGTTACACTGATTCTGATTGGGCAGGTTGTGCTTCTGATAGGAAGAGCACTTCAGGGTGTTGTTTTGGGTTGGGTTCAGCAGTAGTGTCATGGTTCAGCCGGAAGCAGCAGTCAGTAGCATTGAGTTCAGCGGAAGCAGAGTATATGGCAGCCAGTCTAGCTAGTTGTGAGGCCATCTGGCTTCGCAAGATGTTGTTTGGCTTATTTGGTCAGCCGTTGAGACCTTCAGTGATTTACTGTGATAATCAGAGTTGCATTAAACTCACGGAGAATCCAGTATTTCATGACAGGTCAAAGCATATCGGGATCAAATATCATTTCATCAGAGACTATGTTCAGAAGGGAGCTGTGAAGCTTGAGTATATTTCCACTGATGAGCAGGTTGCAGATATTCTTACCAAAGCCTTACCACGGGGCAAGCATGTCTACTTCAGAGACAAGATGGGTGTGGTGAGGAACACCTTCCTCGGTAAGAGGGAGTGTTGA___AATTTGGTACCGGAGGACAGGTGGTTCCCTAAGGCTTTGATCTTTGGCCTAGGGAAAAGTGTCCAAAAGAATTTAATTTTTCTCCTAAAGTGACTTTATAATTTTATAAAGTTAAATCTAATTTAAAAGTGACTTTAAGTGATAAAGTTACTAAGTCTAATTTTAAAGTGACTTTTATAAAGTCAATGAAAAATTAGAAAGGAAAAGTGACTTTGGAAATAAATGACTAAGTGGGTCTTTATTAAAGTGGGGTGAATTAAAAAATAGAAAGTGAGATTTAAATGAGCATTTAATCTCAGCCATTGATCTAAATCTATTTCAGCCATTGGATTTAGAGATCACCCAAAAGTCACTTGGATCACCCAAAAGTCACTTGGAGTTATATTAAAGGAGGAAAATGAGCAAAAATTCTTTCATGAGCAAATTGGGAGAAGGAGAGCAAGAGAGCAAGAGAGATTTCTGAGCGAAGGAGACAGCAGCTTGGCACACATTCCAAGGCAGCAGTTGAGCAGATTTGTACAGCTGATTCAGCACACAGTGAAAGGCAGATTTTGGCACGATTTTCGAGGAGTGGTTTGCACAAAAATCGAGGAGCAGTTTGCTGATTTTTCTGCACACAAAACGGAGGCCGTACAACATTTATTGTTGTCCTGTTTGCTGTAATTTCCAGATTGCTGTGAGGCACGGGAAAGGAGATAAGTTGTAAATTTGCTTGCTGATTTTTTGCTGAATAATTCTCACTGTAAAAAGACAATTTTCAGAAATAAAGAAGAGCTCTCAAACTGGTTTTCCCCAAGAGTTGTAGGGGGTTTTTCCAGGGTCACATTGACCAAAAATCACGGTGTTATTTTCTGTCTGGCTGTCATAATTTTGCTGTGTTCTATTTCTGCAATTTCAGCAGTTGTGAAATCTCTAAATTTGTGTTTTCAGAAAATATTGTCATTTCCAGATTTTAGAATTTTTATCATGCTTGGATTTAAAACTAAATGCTGGGAGTGATAAGGAAAACTGATAACCGGAGTGGCGGTTGAAATTTCTTCATGGTATCAGAGAGCTTGGTGGGCTGAAAAGTGCAGTTTGGGATAACAAAGTGAAAATTACAGCAATCTGATTTTTACACAAAAAACAGAAACCTTTACCACAGATTTGAAAATTTCAGTTTGGTAGGACAGTGAAACATATCTTTGGGTTTGAGAGTTGAAGACAGGTTGGATGGGCAGAACAACTACAGTGCATGGAAGGAGAGAATCCAGAGCATCTTAGAGGAAGCAGAAGTCCGGAGCATTATGGTAAATACCACACAGAACCCAGTGGTAGTACCTGTTGACCCTGTACAGTTGTCAGAGTTTAACAAAAAGAATGCTAAGGCAAAAAGATTGATTCTGGAAGGAATCAAAGACCATGTCATTCCTCATGTGAGACGAAAGACTTATGCACATGAGATGTGGATAGCCTTAACCAGTCTTTACCATAGCTCAAATTAAAACAGAAAAATGGTCCTAGAGGAGAAATTGAAGGTCATTAAAATGGCTAACACTGACAGTGCTACAACATAACTCACAAAGATCAATTCAGTGAGAGATGAGTTGGCAGCCGTAGGTGAGATCATTGCACCCACTGAGTTGGTGAGGATTGCTTTGAATGGTCTTCCCAAGACTTGGGAGAATTTTGTGGATGGCATTGTTGCACGGGAAAACCTTCCCGATTGGGAGAGGTTGTGGGATGATTGCATTTAGAATGAGATCAAAAAGAACCATCTTGGGGCAACCAAACAGGTGGGAGGAGGATGACAATGTGGCATTGTTAGTAAGAAGCAAGAAGGGCAGAGCAAAGAAGCAAGCTTCCAATAGTGGAGGCAAAGGCAAAGGTAAAGGCAAGCAGCAGAACAAGGAGAAGGACTATTCCAAAGTCAAATGTTGGAATTGTCAAAAGTTGGGACACTATGTTGTTGTGTGTCCGGAGAAGAAGAACAAGAAAGGGAAAGACAAACCCATGGCAGCTTTTGCAGAGATAGACAACTTCTCAGAGAGCTTTGATCGGGAGTTTGGGTTCGTAGCTTGTGAGGCCACTAGTGCAGGATCATTTGCCATACAGGTTTAGAGGGAGTGTGCATTC

Fln Alignment:

Contig8836___MQEEYSSIMKNDVWEVVPRPEGKSVVTSRWLYKVKHAADGSIEKFKARFVARGFSQVEGVDYEETFAPVARYTSIRSIISIAAEMGWKIHQMDVKTAFLNGFIQEEVYIEQPQGFEVHGKESHVCRLKKALYGLKQAPRAWYSRIDTYLQGMGFTKSEADPNLYFIVIGEEPXXXXXXXXXXXXTGAERLIEHCKRDLAAEFEMKDIGLMHYFLGLEVWQEEGHFFLGQGKYIVDILSRFHMEDCRPMSTPMITNWKKLHASDSELVDPTLYRQLIGSLMYLVNTRPDICFAVNTMSQFMCEPRKVHWVAAKHILRYLQGTVDYGLDYRQGDGVRLAGYTDSDWAGCASDRKSTSGCCFGLGS
B8LKV8______________MNKEMESIKKNDTWDLVDLPKEKECISVKWVYKTKYKANGELDKHKARLVAKGFAQEYGVDYNETFAPVARLDTIRMVLAIAAQHNWKVYQMDVKSAFLNGYLEEEVYVQQPPRYEVRGQEDKVYRLKKALNGLKQAPRAWYSKIDSYMIKNEFIRSTSEPTLYTKVNEQGQILIVCLYVDDLIYTGNLTIDMFKSAMKKEFEMTDLGLMNYFLGIEVTQKDKGIFICQSKYARDVLKRFRMINCSPVSTPVGVGTKLSREQNEMDFDSTIFRKLVGSLMYLTATRPDIMYGVSLISRFMDTPKNSHWQAGKRLLRYIAGTMNHGILYSTSNNLQLVGYTDSDFAGSIDDRKSTSGYAFHLGT

SNPs (tot: 67)

Position	A %	C %	G %	T %	Probability
627	33	66			0.997452
628	33			66	0.997452
630		66	33		0.997452
631	66			33	0.997452
636			83	16	0.994512
638	83		16		0.994512
663	16		83		0.994512
674		16		83	0.994512
699		80	20		0.995493
701		25	75		0.996473
708	25		75		0.996473
710	75			25	0.996473
740	25		75		0.996473
761	75		25		0.996473
763	75		25		0.996473
871	66		33		0.997452
920		66		33	0.997452
939		33	66		0.997452
1037	85	14			0.993533
1041	14		85		0.993533
1052			85	14	0.993533
1055	14		85		0.993533
1076		85		14	0.993533
1084		85		14	0.993533
1090		85		14	0.993533
1102		14		85	0.993533
1107	11	77		11	0.968132
1109			11	88	0.923564
1110		88	11		0.923564
1111	11		88		0.923564
1112	11		88		0.923564
1116		88		11	0.923564
1126	11		88		0.923564
1136		11		88	0.923564
1147	22		77		0.999999
1165	11		88		0.923564
1177		77		22	0.999999
1187	25		75		1.0
1220		16		83	0.994512
1225	16		83		0.994512
1249	20		80		0.995493
1262		80	20		0.995493
1271		80		20	0.995493
1272	20		80		0.995493
1285	16		66	16	0.988813
1303	40		60		1.0
1309		80		20	0.995493
1311	20		80		0.995493
1334	25		75		0.996473
1344		66		33	0.997452
1457		33		66	0.997452
2117		20		80	0.995493
2118		80		20	0.995493
2159	81		18		0.999994
2164	90		10		0.90298
2167		90		10	0.90298
2202			87	12	0.992554
2205	87	12			0.992554
2206		14		85	0.993533
2219	75	25			0.996473
2222			25	50	0.995533
2225			75	25	0.996473
2226		25	75		0.996473
2228	75			25	0.996473
2229	75			25	0.996473
2230	75	25			0.996473
2231	25		75		0.996473

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain