SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene8751

Length: 1449 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene8751

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Mitochondrial glycoprotein family protein [Arabidopsis thaliana] emb\|CAB82978.1\| putative protein [Arabidopsis thaliana] gb\|AAP88362.1\| At5g02050 [Arabidopsis thaliana] dbj\|BAE99935.1\| hypothetical protein [Arabidopsis thaliana] gb\|AED90426.1\| Mitochondri	-	-	5.0e-34	36%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	86%

Source	Gene names
Sma3	At5g02050; GSVIVT00018408001; Os01g0143300; OsI_00351; P0019D06.31; P0024G09.19; POPTRDRAFT_735606; RCOM_1157670; RCOM_1482340; T7H20_100;

Source	GOs	Term	Type	e value	Identity
Sma3	mitochondrial matrix	GO:0005759	Cellular Component	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Mitochondrial glycoprotein	IPR003428	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NZV3

Fln msg:

Fln protein: MALFYCRRAASSVAPVAFRALKQQRLIHSALGALFENRCRREITKGASWIPSRAATATAAKSKYEKNLLAVLDEEIQCAIESDPPEQDVKPEGNIPFEIEDLPGVQTITLRRKYGNEEIKVEVLSGDVDDDNDEEGSGSDTTSGGIQVNLTVTVAKGGGPFLEFICTGYSDGISIEGMAVKHKQPTEAEAVDPIPYEGPPFNDLDENLQKGFHKYLELRGITPSLSNYLCEYMINKESKEYTNWLKNVKEFVEK*

Protein Length: 256

Fln nts: ATAAACTCTCGAGAGGGTTTTAGTTGGGTTTAGTGTACACAGGGTTTTATGAAAAAACAAAGCTAAGCAGTGGTACCAAAGCAGAGAACCCGAAACGCTCGACAGGGTTTTAGTTGGGTGTAGTGGTCTTTGATATATTTTACGAATTTTAGCTGTGGTTCTGATTTATCTACGAAGTTTGGGTACTTAAGCGTATCTGCGATTTCGATTTAAATAGCAGATAGTGGTCCTTTAATTTTTTGTCGCA_-_ATGGCTCTGTTTTATTGTCGCAGGGCTGCCTCATCTGTTGCACCAGTGGCCTTCAGAGCCCTAAAGCAGCAGAGATTAATTCATTCAGCCCTTGGGGCTTTATTTGAAAACCGCTGTAGGAGAGAAATAACGAAAGGTGCATCATGGATTCCAAGCCGAGCGGCTACTGCAACAGCAGCCAAGTCGAAATACGAAAAAAACCTCCTGGCAGTTCTTGATGAGGAGATTCAGTGTGCGATTGAATCAGACCCTCCCGAGCAGGATGTCAAACCCGAGGGCAACATACCCTTTGAGATAGAAGATTTACCAGGCGTTCAGACGATTACACTCCGGAGGAAATATGGTAACGAGGAAATAAAGGTTGAAGTTCTTTCCGGGGATGTTGATGACGATAACGATGAAGAAGGCAGTGGTAGTGATACCACGTCAGGGGGGATCCAAGTGAATTTGACGGTCACTGTTGCCAAAGGAGGAGGTCCTTTCCTCGAGTTTATTTGCACTGGGTATTCCGACGGCATTTCAATTGAGGGCATGGCTGTCAAGCATAAGCAGCCGACAGAAGCAGAAGCAGTTGATCCCATTCCGTATGAGGGGCCTCCCTTCAATGACTTGGACGAGAATTTGCAGAAGGGCTTTCATAAATACTTAGAATTGCGAGGCATCACACCTAGCCTATCAAATTACTTGTGCGAGTATATGATAAATAAGGAGAGCAAGGAGTATACTAATTGGTTGAAGAATGTTAAGGAATTTGTTGAGAAGTAA___TAGTAAATGACATTTTTGTTTTGGTAGCTAGTTATCCATTCACCAAGGAAAGGGCCTGATCAACATTTTAGTGAAGAGAAGAAGAAATTGGTTTCATGGGTGTTGTAAACTCCCCTGCCAATTTTTTGAGAAAACTTTGTTGTATTTCAAGTTTTTGATATCCTGTGTTATATGCACTATCCTGTTATATGCCAGGAGTGTAAGGAGTATGTTACTTACAACGTAAATGACATACTTTTTGTTTGGGTAGCTAATTATGCATCAGCCAATAAAAGGGACTGGTCAGTATCAAAGTTCAGAGAAGAGAAGAATGGTGCAATTATTCATGCTACAGTTTAATTAACTGTCTGCAAATTGCCCTGAAGTTCAGTTACAATGATGCGGTTTGTAATTTTAGCAGCTATATTTTCTAGATTTTTTTTTGAGCATTTTTCATG

Fln Alignment:

Contig8751___MALFYC-RRAASSVAPVAFRALKQQRLIHSALGALFENRCRREITKGASWIPSRXXXXXXXKSKYEKNLLAVLDEEIQCAIESDPPEQDVKPEGNIPFEIEDLPGVQTITLRRKYGNEEIKVXXXXXXXXXXXXXXXXXXXXXXXXIQVNLTVTVAKGGGPFLEFICTGYSDGISIEGMAVKHKQPTEAEAVDPIPYEGPPFNDLDENLQKGFHKYLELRGITPSLSNYLCEYMINKESKEYTNWLKNVKEFVEK
A9NZV3______________MALFYVVRRAASSVAPVAFRAIKQQRFIHSAVGSAFQNRYRREITKGTSWVPSRAATSIVAKSKFEENLLAVLDEEIQCAVESDPPTQDVKPEGTIPFEIEDLPGVQTIALRRKYGSEEIKVEVLSGDDGDGNDEEGSGNDTASGGIQVNLTVSVAKGGGPFLEFICTGYADAVSIEGMAVKQKQPTESDAVDPIPYEGPPFNDLDENLQKGFHKYLEVRGITPSLSNYLCEYMINKESKEYTNWLKNVKEFVEK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain