SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene8661

Length: 2450 nt

UniGene Fasta

>sp_v3.0_unigene8661
GCGGAATATACGAAGAGCTAACACCAGTTGGCAGTACTATGAGAAGTCCGTTGTCGTCTATTTATCCAAATCGCTCCTAGCGGCAAGGATCCGGTTCGCCATAAATTCATCTGGTTGTTGTTCATTTGTGCTCAAATCCCACCAAATTTCCTCTCGATTCCCTTACCGTTTGTCTTTTACTTCTCATTTCCGTTTGGGGTTTTGATGGTCCGGAAGTCCAATCCCGCGAGGGTGGCCTGATCTTTTTGACATTTTTTTTTCGCCTGCAACTCCGTTCTGGTTTTTCAGAGTCATTTGTATAGAGAAATCAAATGAACAGCAGCAAGGCAGCAGTCGGAACCGCGGTAGTATGTGCGGCCACAGCCTGTGCTGTAGCAGCATTGATTGTCAGCCGTCGCGCTCGAAATAAGAACAGGCTGAAACGGGCGATTGCCATTCTCCGCGACTTCGAGGACAAGTGTTCGACTCCCGTGCACAAGCTCAGGAATGTCGTGGATTCTCTAATCGTCGAGATGAACGCAGGCTTGGCCTCCGAGGGCGGCAGTAAGGTCAAGATGATCATAAGCTACGTCGACAATCTGCCTACAGGAGATGAGAAAGGTCTTTTCTATGCTTTGGATCTTGGGGGAACCAATTTTCGAGTGTTGCGTGTACAATTGGATGGCAAGGAAGGACAAGTTGCTGATCAAGAGTTTGAAGAAGTGTCTATACCTGCAAGTCTAATGAGTGGCACAACTGAGCAATTGTTTGATTACATTGCCTCAGAACTAGCAACTTTTGTTGCAAAAGAGGGTGAGAACTTCCGTCAGACACCTGGTTACCAAAGGGAGCTTGGTTTCACCTTTTCATTCCCAGTGAAGCAGTTCTCAATCGCCAATGGCACGCTGATCAAGTGGACCAAGGGTTTTTCAATCTCAGGAACGGTTGGCAAGGATGTAGTGGTAGCCTTAAATGAGGCCATGAAAAGAAAGGGTCTGGACATGCGCGTCGCTGCACTGGTGAATGATACAGTGGCAACATTGGCTGGAGGTCGATATTGGGATCAAGACGTTATGGTTGCTGTTATTTTGGGCACTGGCACTAATGCATGCTATGTAGAATGTGCAGAAGCAATTCCGAAATGGCAAGGAGATCTACCGAAATCTGGAAACATGATTATCAACATGGAATGGGGTAACTTTTGGTCTTCCCATCTTCCCATGACAGAATATGACAAGGCTTTTGATGCTCAAAGTTTAAATCCTGGTGAACAGATCTTTGAGAAGCTAATCTCTGGAATGTACTTGGGAGAAATTGTGAGAAGAGTGTTGCTGAGAATTGCTGAAGAAGCTGCTTTATTTGGAGATACCGTACCACCTAACCTGGCACTTCCATTCAAATTAAGGACTCCAGATATATCTGCTATGCATAGTGACACCTCTTCTGATTTCAAAGTCGCCGGAAGAATATTAAAGGATGTCTTGGGGATTCCATACTCTTCAATGAGTACTCGAAAAATTGTCGTTGAACTTTGCCGCATTGTAGCAGAACGCGGTGCCCGTTTGGCGGGAGCTGGGGTGGTTGGAATATTGAAAAAGATTGGAAGAGATAATGTAAATGAAGCTGCAGGAAAAAAGAGGACCGTTGTTGCAATGGATGGGGGGCTTTATGAACACTACCCCCTCTTCCGAGAATATCTGCAAAATGCAGTTATAGAATTGCTTGGAACCAAGATCTCAGAAAGTGTGGTTATAGATCATTCAAAGGATGGCTCGGGTATTGGAGCTGCTCTCCTTGCTGCATCTCACTCGATATACTTGGAGGAGCAGTGACTGGGATAGTCACTCGTCTTTTTAAAACGCACGTTCTAGTGTTATTATATCACACATCTGGTTGTAATACTAAATATGCAATCATCTCACTCGGAGATAATCTCTTTTTTCTAGAAGCAGGCTTCTCAGGAGCCATAATTTATGCCCCTCATGTATAGTCCTTTACAATAAAAATATTAGTTCAGAATCAAGTATAAATTTTTCGGTCACCAAATTCTATTCCAAAATATCGTATTGATATAAATAATAATCTTGAATTCCTCAGTTTAACCAGGCCAAAATTGCCAATTTAAAGACGAAATGTTCTTCCGGGGAAGATGCTGTTCTTTAAATTGTCTTCTCTGGTTAAGCGGACACTGAAAGTGAACGTTCTCATAAGCATATGGTGAAGCAAATTGGAATAAATCTAATTCATACAAATTTGAGAGAGGTTGTAATTGGACAATCATACCTGATGTGCAAAATTACACCCTTTGTCATGAAATTCTTTGTATACGGTGATGGGAGTAGCTTGTATTCTTTTCACTTCCGTTTATTTGATATAAGCTGGAAGGATGTGAACATGTTAAACCTGTATTTGAATTTGACTGTGAGATTGCTCCTCATGCGTAAATCGCTTTAATAATCATTGAACATTGA

Ace file of the UniGene sp_v3.0_unigene8661

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI	-	-	0.0	65%
FL-Next	sp=Hexokinase-1; Spinacia oleracea (Spinach).	-	-	0.0	68%
Sma3	Hexokinase	-	-	1.12524e-42	-

Source	ECs	Term	Type	e value	Identity
Sma3	Hexokinase.	EC:2.7.1.1	-	0.0	-

Source	KEGGs	Term	Identity
Sma3	Glycolysis / Gluconeogenesis	00010	%
Sma3	Fructose and mannose metabolism	00051	%
Sma3	Galactose metabolism	00052	%
Sma3	Starch and sucrose metabolism	00500	%
Sma3	Amino sugar and nucleotide sugar metabolism	00520	%
Sma3	Biosynthesis of phenylpropanoids	01061	%
Sma3	Biosynthesis of terpenoids and steroids	01062	%
Sma3	Biosynthesis of alkaloids derived from shikimate pathway	01063	%
Sma3	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	%
Sma3	Biosynthesis of alkaloids derived from histidine and purine	01065	%
Sma3	Biosynthesis of alkaloids derived from terpenoid and polyketide	01066	%
Sma3	Biosynthesis of plant hormones	01070	%
Sma3	Metabolic pathways	01100	%
Sma3	Biosynthesis of secondary metabolites	01110	%

Source	Gene names
Sma3	At1g47840; At1g50460; At2g19860; At3g20040; At4g29130; At4g37840; B1150F11.26-1; F11F12.18; F19B15.160; F6F22.11; GIN2; GSVIVT00002294001; GSVIVT00010644001; GSVIVT00014427001; GSVIVT00016656001; GSVIVT00022229001; GSVIVT00034293001; HXK; HXK1; HXK10; HXK

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	mitochondrial outer membrane	GO:0005741	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	plastid outer membrane	GO:0009527	Cellular Component	-
Sma3	plastid	GO:0009536	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	glucokinase activity	GO:0004340	Molecular Function	-
Sma3	hexokinase activity	GO:0004396	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	fructokinase activity	GO:0008865	Molecular Function	-
Sma3	transcription regulator activity	GO:0030528	Molecular Function	-
Sma3	glycolysis	GO:0006096	Biological Process	-
Sma3	response to DNA damage stimulus	GO:0006974	Biological Process	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	response to heat	GO:0009408	Biological Process	-
Sma3	response to cold	GO:0009409	Biological Process	-
Sma3	response to water deprivation	GO:0009414	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	hexokinase-dependent signaling	GO:0009747	Biological Process	-
Sma3	sugar mediated signaling pathway	GO:0010182	Biological Process	-
Sma3	response to UV-B	GO:0010224	Biological Process	-
Sma3	glucose mediated signaling pathway	GO:0010255	Biological Process	-
Sma3	programmed cell death	GO:0012501	Biological Process	-
Sma3		GO:0045449	Biological Process	-
Sma3	cell division	GO:0051301	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Transcription factor TFIIB	IPR000812	-	-
Sma3		IPR001092	-	-
Sma3	Hexokinase	IPR001312	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G29130.1	ATHXK1, GIN2, HXK1 hexokinase 1 chr4:14352338-14354865 REVERSE LENGTH=496	66%
RefSeq	Arabidopsis thaliana	NP_194642.1	hexokinase 1 [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002299739.1	predicted protein [Populus trichocarpa]	68%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9SEK3

Fln msg:

Fln protein: MNSSKAAVGTAVVCAATACAVAALIVSRRARNKNRLKRAIAILRDFEDKCSTPVHKLRNVVDSLIVEMNAGLASEGGSKVKMIISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLDGKEGQVADQEFEEVSIPASLMSGTTEQLFDYIASELATFVAKEGENFRQTPGYQRELGFTFSFPVKQFSIANGTLIKWTKGFSISGTVGKDVVVALNEAMKRKGLDMRVAALVNDTVATLAGGRYWDQDVMVAVILGTGTNACYVECAEAIPKWQGDLPKSGNMIINMEWGNFWSSHLPMTEYDKAFDAQSLNPGEQIFEKLISGMYLGEIVRRVLLRIAEEAALFGDTVPPNLALPFKLRTPDISAMHSDTSSDFKVAGRILKDVLGIPYSSMSTRKIVVELCRIVAERGARLAGAGVVGILKKIGRDNVNEAAGKKRTVVAMDGGLYEHYPLFREYLQNAVIELLGTKISESVVIDHSKDGSGIGAALLAASHSIYLEEQ*

Protein Length: 501

Fln nts: GCGGAATATACGAAGAGCTAACACCAGTTGGCAGTACTATGAGAAGTCCGTTGTCGTCTATTTATCCAAATCGCTCCTAGCGGCAAGGATCCGGTTCGCCATAAATTCATCTGGTTGTTGTTCATTTGTGCTCAAATCCCACCAAATTTCCTCTCGATTCCCTTACCGTTTGTCTTTTACTTCTCATTTCCGTTTGGGGTTTTGATGGTCCGGAAGTCCAATCCCGCGAGGGTGGCCTGATCTTTTTGACATTTTTTTTTCGCCTGCAACTCCGTTCTGGTTTTTCAGAGTCATTTGTATAGAGAAATCAA_-_ATGAACAGCAGCAAGGCAGCAGTCGGAACCGCGGTAGTATGTGCGGCCACAGCCTGTGCTGTAGCAGCATTGATTGTCAGCCGTCGCGCTCGAAATAAGAACAGGCTGAAACGGGCGATTGCCATTCTCCGCGACTTCGAGGACAAGTGTTCGACTCCCGTGCACAAGCTCAGGAATGTCGTGGATTCTCTAATCGTCGAGATGAACGCAGGCTTGGCCTCCGAGGGCGGCAGTAAGGTCAAGATGATCATAAGCTACGTCGACAATCTGCCTACAGGAGATGAGAAAGGTCTTTTCTATGCTTTGGATCTTGGGGGAACCAATTTTCGAGTGTTGCGTGTACAATTGGATGGCAAGGAAGGACAAGTTGCTGATCAAGAGTTTGAAGAAGTGTCTATACCTGCAAGTCTAATGAGTGGCACAACTGAGCAATTGTTTGATTACATTGCCTCAGAACTAGCAACTTTTGTTGCAAAAGAGGGTGAGAACTTCCGTCAGACACCTGGTTACCAAAGGGAGCTTGGTTTCACCTTTTCATTCCCAGTGAAGCAGTTCTCAATCGCCAATGGCACGCTGATCAAGTGGACCAAGGGTTTTTCAATCTCAGGAACGGTTGGCAAGGATGTAGTGGTAGCCTTAAATGAGGCCATGAAAAGAAAGGGTCTGGACATGCGCGTCGCTGCACTGGTGAATGATACAGTGGCAACATTGGCTGGAGGTCGATATTGGGATCAAGACGTTATGGTTGCTGTTATTTTGGGCACTGGCACTAATGCATGCTATGTAGAATGTGCAGAAGCAATTCCGAAATGGCAAGGAGATCTACCGAAATCTGGAAACATGATTATCAACATGGAATGGGGTAACTTTTGGTCTTCCCATCTTCCCATGACAGAATATGACAAGGCTTTTGATGCTCAAAGTTTAAATCCTGGTGAACAGATCTTTGAGAAGCTAATCTCTGGAATGTACTTGGGAGAAATTGTGAGAAGAGTGTTGCTGAGAATTGCTGAAGAAGCTGCTTTATTTGGAGATACCGTACCACCTAACCTGGCACTTCCATTCAAATTAAGGACTCCAGATATATCTGCTATGCATAGTGACACCTCTTCTGATTTCAAAGTCGCCGGAAGAATATTAAAGGATGTCTTGGGGATTCCATACTCTTCAATGAGTACTCGAAAAATTGTCGTTGAACTTTGCCGCATTGTAGCAGAACGCGGTGCCCGTTTGGCGGGAGCTGGGGTGGTTGGAATATTGAAAAAGATTGGAAGAGATAATGTAAATGAAGCTGCAGGAAAAAAGAGGACCGTTGTTGCAATGGATGGGGGGCTTTATGAACACTACCCCCTCTTCCGAGAATATCTGCAAAATGCAGTTATAGAATTGCTTGGAACCAAGATCTCAGAAAGTGTGGTTATAGATCATTCAAAGGATGGCTCGGGTATTGGAGCTGCTCTCCTTGCTGCATCTCACTCGATATACTTGGAGGAGCAGTGA___CTGGGATAGTCACTCGTCTTTTTAAAACGCACGTTCTAGTGTTATTATATCACACATCTGGTTGTAATACTAAATATGCAATCATCTCACTCGGAGATAATCTCTTTTTTCTAGAAGCAGGCTTCTCAGGAGCCATAATTTATGCCCCTCATGTATAGTCCTTTACAATAAAAATATTAGTTCAGAATCAAGTATAAATTTTTCGGTCACCAAATTCTATTCCAAAATATCGTATTGATATAAATAATAATCTTGAATTCCTCAGTTTAACCAGGCCAAAATTGCCAATTTAAAGACGAAATGTTCTTCCGGGGAAGATGCTGTTCTTTAAATTGTCTTCTCTGGTTAAGCGGACACTGAAAGTGAACGTTCTCATAAGCATATGGTGAAGCAAATTGGAATAAATCTAATTCATACAAATTTGAGAGAGGTTGTAATTGGACAATCATACCTGATGTGCAAAATTACACCCTTTGTCATGAAATTCTTTGTATACGGTGATGGGAGTAGCTTGTATTCTTTTCACTTCCGTTTATTTGATATAAGCTGGAAGGATGTGAACATGTTAAACCTGTATTTGAATTTGACTGTGAGATTGCTCCTCATGCGTAAATCGCTTTAATAATCATTGAACATTGA

Fln Alignment:

Contig8661___IAILRDFEDKCSTPVHKLRNVVDSLIVEMNAGLASEGGSKVKMIISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLDGKEGQVADQEFEEVSIPASLMSGTTEQLFDYIASELATFVAKEGENFRQTPGYQRELGFTFSFPVKQFSIANGTLIKWTKGFSISGTVGKDVVVALNEAMKRKGLDMRVAALVNDTVATLAGGRYWDQDVMVAVILGTGTNACYVECAEAIPKWQGDLPKSGNMIINMEWGNFWSSHLPMTEYDKAFDAQSLNPGEQIFEKLISGMYLGEIVRRVLLRIAEEAALFGDTVPPNLALPFKLRTPDISAMHSDTSSDFKVAGRILKDVLGIPYSSMSTRKIVVELCRIXXXXXXXXXXXXXXXILKKIGRDNVNEAAGKKRTVVAMDGGLYEHYPLFREYLQNAVIELLGTKISESVVIDHSKDXXXXXXXXXXXXXXXYLEE
Q9SEK3______________MAILKELDDNCGTPLGKLRQVADAMTVEMHAGLASEGASKLKMLISYVDNLPTGDEHGLFYALDLGGTNFRVLRVKLGGKEKRVVEQEFDEVSIPPELMVGTSEQLFDYIAEALAKFVATESEGLHPEPNKQRELGFTFSFPVKQTSIASGTLIRWTKGFNIEDTVGEDVVAELTKAMLRKGVDMRVTALVNDTVGTLAGGRYYKEDVIAAVILGTGTNAAYVERASAIHKWHGPLPKSGEMVINMEWGNFRSSYLPLTEYDIALDEESLNPGEQIFEKMISGMYLGEIVRRVLYRMADEASLFGDTVPSKLKTPFILRTPDMSAMHHDTSPDLKVVASKLKDVLGIPNSSLKVRKIIVDVCDVIASRGACISAAGILGIIKKLGRDTLKQGENQK-SVIALDGGLFEHYAKFRECMEDSLKELLGDEVAETIVIEHSNDGSGIGAALLAASHSQYLEE

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
1440	25	75			1.0
1640	10		90		0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain