SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene7759

Length: 1315 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene7759

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Flavonoid 3'-hydroxylase n=1 Tax=Pelargonium x hortorum RepID=Q9FPM9_PELHO	-	-	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	76%
Sma3	Flavonoid 3'-hydroxylase	-	-	-

Source	ECs	Term	Type	e value	Identity
Sma3	Flavonoid 3'-monooxygenase.	EC:1.14.13.21	-	6.906e-10	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Flavonoid biosynthesis	00941		6.906e-10	%
Sma3	Flavone and flavonol biosynthesis	00944		6.906e-10	%
Sma3	Biosynthesis of phenylpropanoids	01061		6.906e-10	%
Sma3	Metabolic pathways	01100		6.906e-10	%
Sma3	Biosynthesis of secondary metabolites	01110		6.906e-10	%
Sma3	Flavonoid 3',5'-hydroxylase.	EC:1.14.13.88	-	8.554e-08	-

Source	KEGGs	Term	e value	Identity
Sma3	Flavonoid biosynthesis	00941	8.554e-08	%
Sma3	Flavone and flavonol biosynthesis	00944	8.554e-08	%
Sma3	Biosynthesis of secondary metabolites	01110	8.554e-08	%

Source	Gene names
Sma3	5'h; AT4g12320; AT4g37360; AT4g37370; At1g66540; At4g12320; At4g37360; At4g37370; At5g07990; B1097H10.9; Bel; CYP75; CYP75B1; CYP75B2; CYP81B1c; CYP81B1l; CYP81E10; CYP81Q1; CYP81Q2; CYP82C1; CYP82C11v1; CYP82C5v1; CYP82E13; CYP82J1v1; CYP82K1; F13G24.190

Source	GOs	Term	Type	Identity
Sma3	endoplasmic reticulum	GO:0005783	Cellular Component	-
Sma3	endoplasmic reticulum membrane	GO:0005789	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	GO:0016702	Molecular Function	-
Sma3	flavonoid 3'-monooxygenase activity	GO:0016711	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	flavonoid biosynthetic process	GO:0009813	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Aminoacyl-tRNA synthetase, class I, conserved site	IPR001412	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Lipoxygenase, C-terminal	IPR013819	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLA5

Fln msg: your sequence is shorter than subject: 350 - 528

Fln protein: KEPSTFLLVRRQWRRPYLQPRLLTWDILRVLLLSRERVGAALLAVASVEEFKKIITVSTSELLGAFNLGDYIPFLRWLDLQGCERAMKKLHRRRDEFLHRVIDNSRLCMKKENDDSLIDVLLHLVDKAEDFCGEDAIVKATAISMIIASTDTYANTTEWAMATLLQRSDVLKRAQEELDVIVGKERILEESDLAKLKYLEAIVKETLRLYPAAPLLLPHVTSAQCH*SIALSVPEGTEVLFNAWGIHRDSAVWESPLKFEPERFINSSIDVNGHDFTYIPFGYGRRACPGIWLAMRMLLLTVGRLLQGFDWSIPEGTEGVDMNEGRAVTLHRAVPLEAAIRPRLPHHLY*

Protein Length: 351

Fln nts: AAAAGAACCCTCGACCTTTCTTTTAGTGAGAAGACAGTGGAGGCGCCCCTATTTGCAGCCACGGCTTCTGACATGGGATATTTTGAGGGTTCTGCTACTGTCTCGGGAGAGAGTGGGTGCTGCGCTTCTGGCGGTTGCAAGTGTGGAAGAATTTAAAAAGATAATTACAGTCAGCACTAGCGAGCTGCTGGGAGCGTTTAATTTGGGGGATTATATTCCATTCCTTAGATGGCTGGATCTCCAGGGCTGCGAGCGGGCAATGAAGAAGTTACACAGGCGACGGGATGAGTTTTTGCATAGAGTGATAGATAACAGCCGGCTTTGTATGAAGAAGGAGAATGACGACAGTCTGATAGATGTGCTTCTACATTTGGTGGACAAAGCCGAAGATTTTTGCGGCGAAGACGCTATTGTCAAGGCCACTGCTATAAGCATGATCATTGCATCAACGGATACCTACGCCAATACAACGGAATGGGCTATGGCAACGCTCCTGCAACGCTCGGATGTGCTGAAAAGGGCACAGGAGGAGCTCGACGTCATAGTTGGAAAGGAGCGCATTTTGGAGGAATCGGATCTCGCGAAGTTGAAGTATTTGGAAGCCATCGTGAAAGAGACTCTACGTCTCTATCCAGCGGCGCCTCTGCTCCTTCCTCATGTTACATCGGCGCAGTGCCACTAGTCGATTGCTCTGAGTGTACCGGAGGGCACAGAGGTTTTGTTCAACGCGTGGGGTATACACAGAGACTCAGCTGTGTGGGAAAGCCCCCTAAAATTCGAGCCGGAGAGGTTTATCAACAGTTCCATAGACGTGAATGGGCATGATTTCACATATATACCGTTTGGTTATGGGAGAAGGGCCTGCCCGGGCATTTGGTTAGCCATGCGCATGCTTCTGCTCACAGTGGGAAGACTGTTGCAGGGTTTCGATTGGAGCATTCCCGAAGGAACTGAAGGAGTTGATATGAATGAAGGTCGTGCTGTTACGCTGCACAGAGCTGTTCCATTGGAGGCGGCCATCAGGCCTCGTCTTCCTCACCATCTGTATTGA___GTCATCACCTCACCTGATCTGTGATGTTGATGAATTGAGAAACATAGGTACACTCTTCTCAAATCTCCAAATTTCATATTAGCTACCGTTTTGCATGACCATTCAGAGTCGTATTATTACTGCGTATAAGTGTAGCAGCAGTCCTTTTCCAGACAGTCCGATTTGCCCGCGGACCCTTGAGGGCATTCATATAAGTGGTTAGTTTGAATATTTTATTGGGATGGTGGTTCGCAATATCCTGGATGATAATAATAAAGTTACAAT

Fln Alignment:

Contig7759___ILRVLLLSRERVGAALLAVASVEEFKKIITVSTSELLGAFNLGDYIPFLRWLDLQGCERAMKKLHRRRDEFLHRVIDNSRLCMKKENDDSLIDVLLHLVDKAEDFCGEDAIVKATAISMIIASTDTYANTTEWAMATLLQRSDVLKRAQEELDVIVGKERILEESDLAKLKYLEAIVKETLRLYXXXXXXXXHVTSAQCH*SIALSVPEGTEVLFNAWGIHRDSAVWESPLKFEPERFINSSI-DVNGHDFTYIPFGYGRRACPGIWLAMRMLLLTVGRLLQGFDWSIPEGTEGVDMNEGRAVTLHRAVPLEAAIRPRLPHHLY
B8LLA5______________MVRLILTHKSYLGS----VEEVEEFKEIITVTTSELLGAFNLGDYIPFLRWLDLQGCERAMKKLNRRRDKFLQRAIDNSRLCIKEENDESLIDVLIHLVDKAEDFFSDEAIVKATAISIIIGATDTYANTTEWALATLLQRPEVLKRAQEELDVVVGSERVLEESDLPNLKYLEAIVKETLRLYPAGPLLLPHMAAAPCIVG-GYYVPAGTELLLNAWGIHRDPAVWERPLEFEPERFLNSSSPDLNGHDFKYIPFGYGRRACPGMWVALRMLLLTVGRLLQSFDWSIPDGIEGVDMNEGRALTLHKAVPLEAAIKPRLPQHLY

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
517	80		20		0.995493
537		80	20		0.995493
610			50	50	1.0
695	33	33		33	0.997753
697			66	33	0.997452
699	33		66		0.997452
700			33	66	0.997452
875	83			16	0.994512
878	14			85	0.993533
880		14	85		0.993533
881	14			85	0.993533
882			14	85	0.993533
884	14		85		0.993533
885		85	14		0.993533
886		85	14		0.993533
907	85	14			0.993533
965			87	12	0.992554
976	87		12		0.992554
986	12		87		0.992554
1042		50		50	1.0
1083	42		57		1.0
1089			16	83	0.994512
1099		16		83	0.994512
1103			16	83	0.994512
1104	83		16		0.994512
1105		50		50	1.0
1106	20	20	40	20	0.994159
1108			20	80	0.995493
1109		80	20		0.995493
1110	20			80	0.995493
1113		20		80	0.995493
1114		80	20		0.995493
1116	80			20	0.995493
1129		50	50		1.0
1236	20		80		0.995493
1272		33	66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain