SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene7088

Length: 4325 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v3.0_unigene7088
CTCACGTGATGTATTTGGGTTTTCGCCCAATCTAGTGCACTAGGGTATTGTGATTTTGTATGCGGAGAGAGAGAGAGCATGGGGAACTGTGAATTTGTCAGGAATATGGGCGCTGCTCTGATTTGAATACGGTTTATAATGTCTGGGACGATGAATCGGAGTGTGTTTGAACAGAATTCAGTTCTCAACGGGCTTGGAAAACATTTGGGTTGGTGAGTATGCTTGACCAGTTCATCATCTGGGGCTCATCAAGGCTTGCTTTGGGAATTATCATCATTTCATGGGCATTATCCAGAACCAGACAGCAAAAGAAAATAACTGAGTAAACAACAGATAGGCTTCAGGAGAAGCAGACAGGCACAACTTTCATTTTTGACTGCCTAATTCTTTCAGTAATGACAATGGAAACTGTGCAATTGCTGCCAAGTAACATGTCGCTTTCAATTCAAGTACTTATCTCATTGTCTGAGAAGGCAAGACACAATCGGTCAAACTGTCATAACCTTGTTGGTCAGTTGAAGTTCTTAAAGCCTTTTTTTGATGAGCTGGAGAAGTCAAATATAACTACGACAGCGCCAGGTTTGAGAGCACTTGAAGCACTAGATTCAACCTTGAATAAAGCCAGAGAACTTGTGGAGAGATGCGGGCCAAAAGGTAGCAAGATATACATGGTGTTGTGTAGTGGGCAGTTCCAACCCAAGTTTGAGGGCATTTCCTTAAAAATGAGTCATGCTTTGAGTACATTGCCATTCGCCTCTTTACATGTTTCGGAACAAACACAAGCACAGGTTGAGCACTGCATAAAGGAGCTGAAAAGACTAAGATATACACGTGAGTCTTATCATGAACAAAAAGCAGCAGATCTAGAGAAAGCATTGAAGGATCACAGAGATGGTATCAAAGTTGATAATGAGAAACTAAGGACAATTGCTGACGGGCTTGAGTTGACATCTAACCAAGAAGTCTTGAGGGAAGCCTCTTATCTGGAAAAGGAGAAAGACTATGCACGTGCTGAAAAAGACAAGCAGGAAGAAGATTACATTAATCAAATGATTGGTTTAGTTACACAAATGTGTGATTACATGGTAGAACTTAAGCAATCCCAGACAGAAGCTGGAGTTCCAATCCCTGCAGACTTTCGATGCCCTCTTTCATTGGAATTGATGTCAGACCCAGTGATTGTAGCTTCTGGGCAAACATATGAGAGAGGTTACATCCAACAATGGCTGGAGCAGGGCATGATAACCTGTCCTAAAACACGCCAGACCCTTAGTCATAGAAACCTTATTCCCAATTATACTGTAAAGGCACTGATTGCAAATTGGTGCGAGTCTAACAATGTCCCATTACCTGAGCCAGCAAAACCTGTAACCTATGCATCTCAGCGAAACCAAACAACAAAAAATGATTCAGATGATGGAATGCAACCCTCTTCAGTGGGTCTGGTGGCTGCAAATAGTATCTTGGTTAATTTCTCGGCTTTACAAAATACCTTGACTCAAAACGAAAATCTGTTCAGAGGACCATGGCTCTAAGAAGGAGAGCTTGGGTTTTCCTCCTAGATCCAATCTAGAAGGAGAGTCAAGCACACAAAGGGATCCATTAATGAATGGTGAGCATCAAATACAAGCAGTTGAAGAGAATTCCATCACTAACGGTGTTTCTAATCAGAGTGAAGGACATAGCCGAAATGTGTCACTTTCAAGTACTGCTTCTAGCTTAGATGATGGTCAAACATCAGCAGGTGGTGATGCACCTATTTCAGAGGGGAATAGTAATACAGCTTTAAGTGACTGCTCTCCATACAGCAGTGATGTTTCGGGAGAGTTAGCTGCACCATCATCAGTGACCCATTCACAACGCAATGATATAGGACCTTCCAGATTGTCTGAAAGAGTATTCCATGGTGGACGTCTCCCAAATTTGTATGGACGGCGAACTGAGCACCGTAGTACCATGCCTTTGGTTATCTCTTCTCCAGTATCTGATACAAGTGCTAATGAGTCGAGCATCCGTCAACAAGTTGAGAGATTGGTAGAAGATCTTCAAAGTGATTCAGTTGAAATACAAAGAGCAGCAGCAGGAGAGCTACGAATTCTCGCCAAATGCAACATGGAAAACCGGATCATAATAGCTAACTGTGGCGCGACCAGGCCTTTAGTTGCGTTGCTAAGTTCTCCTGACTTTGAGACCCAAGAAGTTGCTGTTACGGCTTTGCTGAACTTATCCATAAATGATAATAATAAGAATGAGATTGCTGCTGCAGGAGCCATTGAACCTCTCATAAATGTCCTTACAGTAGGCAACTCTGAAGCGAAAGAGAATGCTGCTGCAACTTTATTCAGCTTATCTGTCATGGAAGAAAATAAAATTGCTATCGGGCAATCAGGTGCTATACCACCACTGGTGGATCTCCTCATGAATGGCACTCCCAGAGGAAAAAAGGACGCTGCCACTGCTTTGTTTAACTTGTCAATTTCACCTGACAACAAAGCCCGTATTGTACGTGCTGGCGCTGTTAAACATCTTATTAGTCTAATGGAGCCTGCAGCTGGAATGGTAGATAAAGCTGTGGCTGTTTTGGCCAATCTTGCAACTATTCATGAAGGTCGAGCTGCAATTGGTGAGGAGCGTGGCATTCCTGCTTTGGTAGAAGTAGTTGAAATTGGTTCACAAAGGGGAAAGGAAAATGCAGCAGCAGCTCTACTCCAACTTTGTATAAATAGCAGTAAGTTTCGTGCTACTGTTTTACAAGAGGGTGCTATTCCACCTCTTGTTGCATTATCTCAGTCTGGCACCCCACGGGCTAAGGAGAAGGCTCAGGCTCTTCTTCGCCATTTTAGGGATCAGCGGCATGCAAGCATGGGAAGGGGTGGTGCCGATAGACACAGATAGACATTTTGATCTAATGTGTAACATCTCATATGCCTCATCTTCTTGCTGCCCCTACTTTAAGATGTATCAGTTGTTTGTGCTTATGTGGGCATTCTTCAAACCAAAAGCCCCCAGGTTAGTAATTTGGTATATTCATATTGTACCTATGGTTTGTAGTTGCAGATGGTTCTGCATGTGATTTCCATGCACCTTTTATATGTGGGTCCTTCCATGCATAATTACTGTTAGCAGTCAGAAACATCTTGTATCAGTTAAGCATCAAGATTGTTTCAAATGAAGTCCTTGCTATTTGTGTCAAAGAGGGAAGAATGGCATAGATGTCATGTTATGGCATCTGTAGCTAGCTGTTTTCAACATATCATTTTTATGCATCATCACTGCTGCCATTTATTTAGGGTATCAATTGGTGACTTTTCAGTTGGATACAAGTTGCAGAGTTTATCCAAGAGAGTTCATAAATGGACTTAATATTCTGTTGAAGCTTCTCATATTTTCAACTTTAAAGGGCAGATCTGATATGCAGAGTTGTCTAGCCAATCTCAACTTATTGACTTGTTTGGTTTGTACTTTTGGCGTATTGTGTGGAAATATTGAATCCGGCTCATTCTGGTGGATAAGCTTCCATTGCTGGTGCACAGGCAATCGACTGCTCTGAAGCATGATACTTCTAATGGCTCATGGACCCAGAAATTGTGTTAAACATGAAGTTGGCTGCAGATGGGTCTTGAATTTATGCTGATCCCACTGCAGTGCTCTGCCCAACCTTGACATTGTTTGTTCACTGCATGTAAACCCCCACTTGCAGTTTAGATTTCATGTTCAGAAGTTTTCAGAAGGGAAGGCAGCTTTTCTGCATTGCTCATCTATGCCTTGATTCTGCTTTAGAGGAGCAAAGCATGAGGTGATGCTCTGTTGAAGGTACTTTTTGCAATTCTCTTTTCGATGGAATGATCTAGGAAGGATGCAGATAATTGGAACATAGCTCGGCTCTGAATCTTGATTATCATTTGACTGTCAAATAAGTATAGAGCTGAGCAACTTCTTTTCCCGATGCTACCATGTTTGACCTTGTACCCTAGGTTCCGAATATATGAAATGGTTTCCTGTGTTGAATTTTGAGGATACAGATCTATTTGTCTGCATTGATTTACATCAGTAGCAGGTTCTGACATCGTGTCTATTGTATTTGCTTGTTACTTCGTTTCATTGTGCTTACCAAAAGTTGATAGCATCCTGAATAATGTATTTGTGGCTCAGCAAAATGCCCTTCGTCTAAACGGAATCTATTGTAAATTCATTGTGTTGGTGGTTGCTTAAAAAGGGCTGGAATAGTTCCAGGCAATCAGACTTTGATAAAGGATAGGTATTCAATTTTTTTCCTCTCGATGACTTCTGAGTTGTAGATGTGGAATAATAAAGTTATAGACTTG

Ace file of the UniGene sp_v3.0_unigene7088 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	U-box multi-domain protein	-	-	3.0e-20	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	36%
Sma3	E3 ubiquitin ligase PUB14, putative	-	-	7.807e-12	-

Source	ECs	Term	Type	e value	Identity
Sma3	Ligases, Forming carbon-nitrogen bonds, Acid--D-amino-acid ligases (peptide synthases).	EC:6.3.2.-	-	2.705e-15	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Tryptophan metabolism	00380		2.705e-15	%
Sma3	Biosynthesis of siderophore group nonribosomal peptides	01053		2.705e-15	%

Source	Gene names
Sma3	ACRE276; AT4g16490; At1g23030; At1g29340; At1g71020; At2g23140; At2g28830; At3g01400; At3g46510; At3g54790; At3g54850; At4g16490/dl4270c; At5g42340; At5g58680; At5g58680/mzn1_130; At5g67340; B1065E10.53; F10G19.3; F12A12.30; F15D2.34; F15H11.22; F23N20.1;

Source	GOs	Term	Type	Identity
Sma3	ubiquitin ligase complex	GO:0000151	Cellular Component	-
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	cytosol	GO:0005829	Cellular Component	-
Sma3	ubiquitin-protein ligase activity	GO:0004842	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	apoptotic process	GO:0006915	Biological Process	-
Sma3	defense response to fungus, incompatible interaction	GO:0009817	Biological Process	-
Sma3	response to chitin	GO:0010200	Biological Process	-
Sma3	protein ubiquitination	GO:0016567	Biological Process	-
Sma3	modification-dependent protein catabolic process	GO:0019941	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Armadillo	IPR000225	-	-
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	Regulator of chromosome condensation, RCC1	IPR000408	-	-
Sma3	ThiJ/PfpI	IPR002818	-	-
Sma3	U box domain	IPR003613	-	-
Sma3	Cyclin, C-terminal	IPR004367	-	-
Sma3		IPR006670	-	-
Sma3	Cyclin, N-terminal	IPR006671	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	Cyclin-like	IPR013763	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G23140.1	RING/U-box superfamily protein with ARM repeat domain chr2:9845696-9849105 REVERSE LENGTH=829	57%
RefSeq	Arabidopsis thaliana	NP_001189583.1	RING/U-box domain and ARM repeat-containing protein [Arabidopsis thaliana]	57%
RefSeq	Populus trichocarpa	XP_002306495.1	predicted protein [Populus trichocarpa]	61%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PSB5

Fln msg: Separated hits, possible frame ERROR between 1361 and 1945, your sequence is longer than subject: 834 - 497

Fln protein: MTMETVQLLPSNMSLSIQVLISLSEKARHNRSNCHNLVGQLKFLKPFFDELEKSNITTTAPGLRALEALDSTLNKARELVERCGPKGSKIYMVLCSGQFQPKFEGISLKMSHALSTLPFASLHVSEQTQAQVEHCIKELKRLRYTRESYHEQKAADLEKALKDHRDGIKVDNEKLRTIADGLELTSNQEVLREASYLEKEKDYARAEKDKQEEDYINQMIGLVTQMCDYMVELKQSQTEAGVPIPADFRCPLSLELMSDPVIVASGQTYERGYIQQWLEQGMITCPKTRQTLSHRNLIPNYTVKALIANWCESNNVPLPEPxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHRSTMPLVISSPVSDTSANESSIRQQVERLVEDLQSDSVEIQRAAAGELRILAKCNMENRIIIANCGATRPLVALLSSPDFETQEVAVTALLNLSINDNNKNEIAAAGAIEPLINVLTVGNSEAKENAAATLFSLSVMEENKIAIGQSGAIPPLVDLLMNGTPRGKKDAATALFNLSISPDNKARIVRAGAVKHLISLMEPAAGMVDKAVAVLANLATIHEGRAAIGEERGIPALVEVVEIGSQRGKENAAAALLQLCINSSKFRATVLQEGAIPPLVALSQSGTPRAKEKAQALLRHFRDQRHASMGRGGADRHR*

Protein Length: 835

Fln nts: CTCACGTGATGTATTTGGGTTTTCGCCCAATCTAGTGCACTAGGGTATTGTGATTTTGTATGCGGAGAGAGAGAGAGCATGGGGAACTGTGAATTTGTCAGGAATATGGGCGCTGCTCTGATTTGAATACGGTTTATAATGTCTGGGACGATGAATCGGAGTGTGTTTGAACAGAATTCAGTTCTCAACGGGCTTGGAAAACATTTGGGTTGGTGAGTATGCTTGACCAGTTCATCATCTGGGGCTCATCAAGGCTTGCTTTGGGAATTATCATCATTTCATGGGCATTATCCAGAACCAGACAGCAAAAGAAAATAACTGAGTAAACAACAGATAGGCTTCAGGAGAAGCAGACAGGCACAACTTTCATTTTTGACTGCCTAATTCTTTCAGTA_-_ATGACAATGGAAACTGTGCAATTGCTGCCAAGTAACATGTCGCTTTCAATTCAAGTACTTATCTCATTGTCTGAGAAGGCAAGACACAATCGGTCAAACTGTCATAACCTTGTTGGTCAGTTGAAGTTCTTAAAGCCTTTTTTTGATGAGCTGGAGAAGTCAAATATAACTACGACAGCGCCAGGTTTGAGAGCACTTGAAGCACTAGATTCAACCTTGAATAAAGCCAGAGAACTTGTGGAGAGATGCGGGCCAAAAGGTAGCAAGATATACATGGTGTTGTGTAGTGGGCAGTTCCAACCCAAGTTTGAGGGCATTTCCTTAAAAATGAGTCATGCTTTGAGTACATTGCCATTCGCCTCTTTACATGTTTCGGAACAAACACAAGCACAGGTTGAGCACTGCATAAAGGAGCTGAAAAGACTAAGATATACACGTGAGTCTTATCATGAACAAAAAGCAGCAGATCTAGAGAAAGCATTGAAGGATCACAGAGATGGTATCAAAGTTGATAATGAGAAACTAAGGACAATTGCTGACGGGCTTGAGTTGACATCTAACCAAGAAGTCTTGAGGGAAGCCTCTTATCTGGAAAAGGAGAAAGACTATGCACGTGCTGAAAAAGACAAGCAGGAAGAAGATTACATTAATCAAATGATTGGTTTAGTTACACAAATGTGTGATTACATGGTAGAACTTAAGCAATCCCAGACAGAAGCTGGAGTTCCAATCCCTGCAGACTTTCGATGCCCTCTTTCATTGGAATTGATGTCAGACCCAGTGATTGTAGCTTCTGGGCAAACATATGAGAGAGGTTACATCCAACAATGGCTGGAGCAGGGCATGATAACCTGTCCTAAAACACGCCAGACCCTTAGTCATAGAAACCTTATTCCCAATTATACTGTAAAGGCACTGATTGCAAATTGGTGCGAGTCTAACAATGTCCCATTACCTGAGCCAGCxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCACCGTAGTACCATGCCTTTGGTTATCTCTTCTCCAGTATCTGATACAAGTGCTAATGAGTCGAGCATCCGTCAACAAGTTGAGAGATTGGTAGAAGATCTTCAAAGTGATTCAGTTGAAATACAAAGAGCAGCAGCAGGAGAGCTACGAATTCTCGCCAAATGCAACATGGAAAACCGGATCATAATAGCTAACTGTGGCGCGACCAGGCCTTTAGTTGCGTTGCTAAGTTCTCCTGACTTTGAGACCCAAGAAGTTGCTGTTACGGCTTTGCTGAACTTATCCATAAATGATAATAATAAGAATGAGATTGCTGCTGCAGGAGCCATTGAACCTCTCATAAATGTCCTTACAGTAGGCAACTCTGAAGCGAAAGAGAATGCTGCTGCAACTTTATTCAGCTTATCTGTCATGGAAGAAAATAAAATTGCTATCGGGCAATCAGGTGCTATACCACCACTGGTGGATCTCCTCATGAATGGCACTCCCAGAGGAAAAAAGGACGCTGCCACTGCTTTGTTTAACTTGTCAATTTCACCTGACAACAAAGCCCGTATTGTACGTGCTGGCGCTGTTAAACATCTTATTAGTCTAATGGAGCCTGCAGCTGGAATGGTAGATAAAGCTGTGGCTGTTTTGGCCAATCTTGCAACTATTCATGAAGGTCGAGCTGCAATTGGTGAGGAGCGTGGCATTCCTGCTTTGGTAGAAGTAGTTGAAATTGGTTCACAAAGGGGAAAGGAAAATGCAGCAGCAGCTCTACTCCAACTTTGTATAAATAGCAGTAAGTTTCGTGCTACTGTTTTACAAGAGGGTGCTATTCCACCTCTTGTTGCATTATCTCAGTCTGGCACCCCACGGGCTAAGGAGAAGGCTCAGGCTCTTCTTCGCCATTTTAGGGATCAGCGGCATGCAAGCATGGGAAGGGGTGGTGCCGATAGACACAGATAG___ACATTTTGATCTAATGTGTAACATCTCATATGCCTCATCTTCTTGCTGCCCCTACTTTAAGATGTATCAGTTGTTTGTGCTTATGTGGGCATTCTTCAAACCAAAAGCCCCCAGGTTAGTAATTTGGTATATTCATATTGTACCTATGGTTTGTAGTTGCAGATGGTTCTGCATGTGATTTCCATGCACCTTTTATATGTGGGTCCTTCCATGCATAATTACTGTTAGCAGTCAGAAACATCTTGTATCAGTTAAGCATCAAGATTGTTTCAAATGAAGTCCTTGCTATTTGTGTCAAAGAGGGAAGAATGGCATAGATGTCATGTTATGGCATCTGTAGCTAGCTGTTTTCAACATATCATTTTTATGCATCATCACTGCTGCCATTTATTTAGGGTATCAATTGGTGACTTTTCAGTTGGATACAAGTTGCAGAGTTTATCCAAGAGAGTTCATAAATGGACTTAATATTCTGTTGAAGCTTCTCATATTTTCAACTTTAAAGGGCAGATCTGATATGCAGAGTTGTCTAGCCAATCTCAACTTATTGACTTGTTTGGTTTGTACTTTTGGCGTATTGTGTGGAAATATTGAATCCGGCTCATTCTGGTGGATAAGCTTCCATTGCTGGTGCACAGGCAATCGACTGCTCTGAAGCATGATACTTCTAATGGCTCATGGACCCAGAAATTGTGTTAAACATGAAGTTGGCTGCAGATGGGTCTTGAATTTATGCTGATCCCACTGCAGTGCTCTGCCCAACCTTGACATTGTTTGTTCACTGCATGTAAACCCCCACTTGCAGTTTAGATTTCATGTTCAGAAGTTTTCAGAAGGGAAGGCAGCTTTTCTGCATTGCTCATCTATGCCTTGATTCTGCTTTAGAGGAGCAAAGCATGAGGTGATGCTCTGTTGAAGGTACTTTTTGCAATTCTCTTTTCGATGGAATGATCTAGGAAGGATGCAGATAATTGGAACATAGCTCGGCTCTGAATCTTGATTATCATTTGACTGTCAAATAAGTATAGAGCTGAGCAACTTCTTTTCCCGATGCTACCATGTTTGACCTTGTACCCTAGGTTCCGAATATATGAAATGGTTTCCTGTGTTGAATTTTGAGGATACAGATCTATTTGTCTGCATTGATTTACATCAGTAGCAGGTTCTGACATCGTGTCTATTGTATTTGCTTGTTACTTCGTTTCATTGTGCTTACCAAAAGTTGATAGCATCCTGAATAATGTATTTGTGGCTCAGCAAAATGCCCTTCGTCTAAACGGAATCTATTGTAAATTCATTGTGTTGGTGGTTGCTTAAAAAGGGCTGGAATAGTTCCAGGCAATCAGACTTTGATAAAGGATAGGTATTCAATTTTTTTCCTCTCGATGACTTCTGAGTTGTAGATGTGGAATAATAAAGTTATAGACTTG

Fln Alignment:

Contig7088___ELKRLRYTRESYHEQKAADLEKALKDHRDGIKVDNEKLRTIADGLELTSNQEVLREASYLEKEKDYARAEKDKQEEDYINQM-----------IGLVTQMCDYMVELKQSQTEAGVPI-PADFRCPLSLELMSDPVIVASGQTYERGYIQQWLEQGMITCPKTRQTLSHRNLIPNYTVKALIANWCESNNVPLPEPAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHRSTMPLVISSPVSDTSANESSIRQQVERLVEDLQSDSVEIQRAAAGELRILAKCNMENRIIIANCGATRPLVALLSSPDFETQEVAVTALLNLSINDNNKNEIAAAGAIEPLINVLTVGNSEAKENAAATLFSLSVMEENKIAIGQSGAIPPLVDLLMNGTPRGKKDAATALFNLSISPDNKARIVRAGAVKHLISLM-EPAAGMVDKAVAVLANLATIHEGRAAIGEERGIPALVEVVEIGSQRGKENAAAALLQLCINSSKFRATVLQEGAIPPLVALSQSGTPRAKEKAQALLRHFRDQRH
C0PSB5______________QLKRSKGRADTQDIELFMDIMIALSQ-KDGRNADSAVLERLADKLQLGTVSDLTVESRAVEKLMKERGGEMGETAEHILYLLKKMKGMQEIGNLGGDKIGFESLALSEVSLEKISSPIFPEDFRCPISLELMQDPVIVATGQTYDRLCIQRWLDLGHKTCPKTQQVLPHMTLTPNYVLRSLIAQWCESHGVEIPSKAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHGVEIPSKAGSSRSDSSDVSFGNRTSIDILVQQLYSRQIDVQRAAAEEIRLLAKRNADNRLLIAEAGAIPQLVKLLSSTDMKTQEHAVTALLNLSIHSSNKGFIVQAGAINRIIDVLKHGSTEARENAAATLFSLSVVDENKVIIGASGAIPPLVDLLRDGTVRGKKDAATAIFNLSIYQGNKFRAVRAGVVPPLIALLVDQSIGMVDEALAILAILATHQEGRIAIGQQSAIDILVELIHSGSARNKENAAAVLLALGMNDSSHLLAAMQLGVFEYLIELAQNGTARARRKARGLLDLISKQEH

SNPs (tot: 38)

Position	A %	C %	G %	T %	Probability
1044			14	85	0.993533
1045	85			14	0.993533
1046	85	14			0.993533
1048		14		85	0.993533
1050	14		85		0.993533
1237			12	87	0.992554
1274	10		90		0.90298
1278		90		10	0.90298
1305		14		85	0.993533
1307		85		14	0.993533
1308		85		14	0.993533
1443	11			88	0.923564
1448		88		11	0.923564
1488	88	11			0.923564
1489	88	11			0.923564
1492	11			88	0.923564
1493	11		88		0.923564
1496			88	11	0.923564
1615	88		11		0.923564
1665		14		85	0.993533
1738	87	12			0.992554
1739		12	87		0.992554
1746	14	85			0.993533
1747	85		14		0.993533
1748	85			14	0.993533
1749	85		14		0.993533
1761			14	85	0.993533
1763		14		85	0.993533
1767			14	85	0.993533
1770		85	14		0.993533
2013		75		25	0.996473
2193	66		33		0.997452
2564		25		75	0.996473
3763	20		80		0.995493
3909	25	75			0.996473
3999	33	66			0.997452
4000		33		66	0.997452
4001	33		66		0.997452

SSRs (tot: 1)

Start position	End position	Sequence	Length
4249	4261	CT CT CT CT CT CT C	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain